Gene list
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COG category: Secondary metabolites biosynthesis, transport and catabolism
Number of genes found: 2488
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS | ||||||||
---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
acpP | BU352 | acyl carrier protein | chromosome | CDS | 385670 | 243 | + | 0.234568 |
fabB | BU092 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 94380 | 1221 | + | 0.314496 |
fabG | BU351 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 384859 | 735 | + | 0.27619 |
yhiQ | BU586 | hypothetical protein | chromosome | CDS | 618781 | 741 | + | 0.25776 |
Buchnera aphidicola str. Bp (Baizongia pistaciae), Bp (Baizongia pistaciae) | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
acpP | bbp322 | acyl carrier protein | chromosome | CDS | 373583 | 237 | + | 0.236287 |
bioC | bbp270 | biotin synthesis protein BioC | chromosome | CDS | 310714 | 744 | - | 0.263441 |
fabB | bbp086 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 93527 | 1224 | + | 0.301471 |
fabG | bbp321 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 372741 | 738 | + | 0.279133 |
Buchnera aphidicola str. Cc (Cinara cedri), Cc | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
acpP | BCc_218 | AcpP | chromosome | CDS | 250714 | 243 | + | 0.139918 |
fabB | BCc_056 | 3-oxoacyl-(acyl-carrier-protein) synthase I | chromosome | CDS | 61084 | 1224 | + | 0.257353 |
fabG | BCc_217 | 3-oxoacyl-(acyl-carrier protein) reductase | chromosome | CDS | 249910 | 738 | + | 0.224932 |
mdlA | BCc_297 | ATP-binding component of a transport system, (ABC superfamily, subfamily B) | chromosome | CDS | 338177 | 1725 | + | 0.191304 |
mdlB | BCc_298 | ATP-binding component of a transport system, (ABC superfamily, subfamily C) | chromosome | CDS | 339933 | 1755 | + | 0.181766 |
Buchnera aphidicola str. Sg (Schizaphis graminum), Sg | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
acpP | BUsg340 | acyl-carrier protein | chromosome | CDS | 386789 | 240 | + | 0.1875 |
fabB | BUsg084 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 94715 | 1224 | + | 0.292484 |
fabG | BUsg339 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 385984 | 735 | + | 0.270748 |
yhiQ | BUsg565 | hypothetical 26.9 kDa protein | chromosome | CDS | 619708 | 750 | + | 0.226667 |
Candidatus Blochmannia floridanus | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
acpP | Bfl403 | acyl carrier protein | chromosome | CDS | 444567 | 237 | - | 0.320675 |
fabB | Bfl498 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 552834 | 1218 | - | 0.339901 |
fabG | Bfl404 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 444940 | 735 | - | 0.317007 |
Candidatus Blochmannia pennsylvanicus str. BPEN, BPEN | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
acpP | BPEN_415 | acyl carrier protein | chromosome | CDS | 491600 | 252 | - | 0.333333 |
fabB | BPEN_514 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 615721 | 1215 | - | 0.364609 |
fabG | BPEN_416 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 491980 | 735 | - | 0.334694 |
Enterobacteria phage Fels-2 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | STM1638 | putative SAM-dependent methyltransferase | chromosome | CDS | 1729115 | 438 | + | 0.484018 |
NA | STM0950 | SlsA | chromosome | CDS | 1027679 | 678 | - | 0.538348 |
NA | STM2178 | putative 1,2-dioxygenase | chromosome | CDS | 2274349 | 1038 | - | 0.567437 |
NA | STM4506 | putative dienelactone hydrolase | chromosome | CDS | 4760028 | 675 | - | 0.539259 |
NA | STM1366 | hypothetical protein | chromosome | CDS | 1449557 | 411 | + | 0.56691 |
NA | STM2011 | putative cytoplasmic protein | chromosome | CDS | 2092957 | 327 | - | 0.409786 |
NA | STM1675 | oxidoreductase | chromosome | CDS | 1768000 | 714 | + | 0.57423 |
NA | STM1606 | putative benzoate membrane transport protein | chromosome | CDS | 1696306 | 1179 | + | 0.578456 |
NA | STM0927 | putative phage tail assembly protein | chromosome | CDS | 1001442 | 576 | + | 0.472222 |
NA | STM0331 | putative fumarylacetoacetate hydrolase | chromosome | CDS | 374837 | 879 | + | 0.498294 |
NA | STM2177 | putative flutathione S-transferase | chromosome | CDS | 2273632 | 702 | - | 0.545584 |
acpP | STM1196 | acyl carrier protein | chromosome | CDS | 1280113 | 237 | + | 0.476793 |
bioC | STM0796 | biotin biosynthetic protein | chromosome | CDS | 862348 | 756 | + | 0.597884 |
caiC | STM0071 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 82564 | 1554 | - | 0.507722 |
cueO | STM0168 | putative multicopper oxidase | chromosome | CDS | 196532 | 1611 | + | 0.564246 |
dlhH | STM3967 | putative dienelactone hydrolase | chromosome | CDS | 4173793 | 813 | - | 0.574416 |
entA | STM0598 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 659921 | 756 | + | 0.585979 |
entB | STM0597 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase | chromosome | CDS | 659064 | 858 | + | 0.568765 |
entC | STM0595 | isochorismate synthase | chromosome | CDS | 656255 | 1176 | + | 0.582483 |
entD | STM0584 | enterochelin synthetase component D | chromosome | CDS | 640808 | 705 | - | 0.558865 |
entE | STM0596 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 657440 | 1611 | + | 0.574178 |
entF | STM0588 | enterobactin synthetase component F | chromosome | CDS | 645462 | 3885 | + | 0.593822 |
eutK | STM2455 | putative carboxysome structural protein | chromosome | CDS | 2565160 | 495 | - | 0.60202 |
eutM | STM2465 | putative detox protein | chromosome | CDS | 2575212 | 291 | - | 0.604811 |
eutN | STM2464 | putative detox protein | chromosome | CDS | 2574812 | 300 | - | 0.573333 |
fabB | STM2378 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2488622 | 1215 | - | 0.573663 |
fabF | STM1197 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1280435 | 1242 | + | 0.552335 |
fabG | STM1195 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1279223 | 735 | + | 0.503401 |
fadD | STM1818 | acyl-CoA synthase | chromosome | CDS | 1915222 | 1686 | - | 0.523132 |
hpaB | STM1099 | 4-hydroxyphenylacetate catabolism | chromosome | CDS | 1185726 | 1563 | - | 0.525912 |
hpaG | STM1101 | 4-hydroxyphenylacetate catabolism | chromosome | CDS | 1188221 | 1290 | + | 0.563566 |
hpaH | STM1105 | 4-hydroxyphenylacetate catabolism | chromosome | CDS | 1192359 | 804 | + | 0.590796 |
hutI | STM0787 | imidazolonepropionase | chromosome | CDS | 851841 | 1224 | + | 0.583333 |
iacP | STM2881 | acyl carrier protein | chromosome | CDS | 3024412 | 249 | - | 0.37751 |
idnO | STM4483 | gluconate 5-dehydrogenase | chromosome | CDS | 4727174 | 765 | - | 0.535948 |
kduD | STM3017 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3177574 | 762 | - | 0.518373 |
menE | STM2305 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2411673 | 1368 | - | 0.599415 |
menF | STM2310 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2417382 | 1296 | - | 0.568673 |
nhoA | STM1582 | putative arylamine N-acetyltransferase | chromosome | CDS | 1668376 | 846 | - | 0.522459 |
pduA | STM2038 | polyhedral body protein | chromosome | CDS | 2116846 | 285 | + | 0.536842 |
pduC | STM2040 | propanediol dehydratase large subunit | chromosome | CDS | 2117958 | 1665 | + | 0.568168 |
pduE | STM2042 | propanediol dehydratase small subunit | chromosome | CDS | 2120322 | 522 | + | 0.561303 |
pduJ | STM2045 | polyhedral body protein | chromosome | CDS | 2123044 | 276 | + | 0.561594 |
pduK | STM2046 | polyhedral body protein | chromosome | CDS | 2123323 | 483 | + | 0.559006 |
pduL | STM2047 | propanediol utilization protein | chromosome | CDS | 2123805 | 633 | + | 0.601896 |
pduN | STM2049 | polyhedral body protein | chromosome | CDS | 2124929 | 276 | + | 0.612319 |
pduT | STM2054 | polyhedral body protein | chromosome | CDS | 2130094 | 555 | + | 0.583784 |
pduX | STM2058 | propanediol utilization protein | chromosome | CDS | 2132712 | 903 | + | 0.55814 |
pncA | STM1293 | nicotinamidase/pyrazinamidase | chromosome | CDS | 1371115 | 657 | - | 0.575342 |
rrmA | STM1835 | 23S rRNA m1G745 methyltransferase | chromosome | CDS | 1932707 | 810 | - | 0.561728 |
slsA | STM3761 | putative inner membrane protein | chromosome | CDS | 3959839 | 681 | + | 0.522761 |
smtA | STM0991 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 1077406 | 804 | + | 0.55597 |
srlD | STM2835 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 2980225 | 780 | + | 0.547436 |
sufI | STM3172 | suppressor of ftsI | chromosome | CDS | 3334467 | 1413 | - | 0.589526 |
tehB | STM1608 | putative methyltransferase | chromosome | CDS | 1698362 | 597 | - | 0.499162 |
ucpA | STM2445 | short chain dehydrogenase | chromosome | CDS | 2556599 | 792 | - | 0.539141 |
yafE | STM0259 | putative methyltransferase | chromosome | CDS | 299097 | 771 | + | 0.525292 |
yafS | STM0262 | putative SAM-dependent methyltransferase | chromosome | CDS | 302152 | 723 | + | 0.507607 |
ybbA | STM0507 | putative transporter | chromosome | CDS | 566439 | 687 | + | 0.590975 |
ybbO | STM0505 | short chain dehydrogenase | chromosome | CDS | 564929 | 771 | - | 0.549935 |
ybbP | STM0508 | putative inner membrane protein | chromosome | CDS | 567122 | 2415 | + | 0.585093 |
ybdB | STM0599 | hypothetical protein | chromosome | CDS | 660679 | 414 | + | 0.601449 |
ycgM | STM1812 | putative fumarylacetoacetate hydrolase | chromosome | CDS | 1910959 | 660 | - | 0.531818 |
yciK | STM1717 | short chain dehydrogenase | chromosome | CDS | 1814369 | 762 | + | 0.568241 |
ydiD | STM1350 | hypothetical protein | chromosome | CDS | 1430189 | 1641 | - | 0.533211 |
yecD | STM1902 | putative isochorismatase | chromosome | CDS | 1997208 | 567 | + | 0.559083 |
yecO | STM1905 | putative SAM-dependent methyltransferase | chromosome | CDS | 1999078 | 744 | + | 0.533602 |
yecP | STM1906 | putative enzyme | chromosome | CDS | 1999818 | 972 | + | 0.552469 |
yghA | STM3157 | oxidoreductase | chromosome | CDS | 3318580 | 885 | + | 0.566102 |
yhbL | STM3327 | sigma cross-reacting protein 27A | chromosome | CDS | 3489612 | 654 | - | 0.577982 |
yhiQ | STM3593 | putative SAM-dependent methyltransferase | chromosome | CDS | 3763175 | 759 | - | 0.624506 |
yigI | STM3956 | hypothetical protein | chromosome | CDS | 4160991 | 486 | - | 0.563786 |
yjhP | STM4500 | putative SAM-dependent methyltransferase | chromosome | CDS | 4753941 | 1632 | - | 0.54473 |
yohF | STM2171 | oxidoreductase | chromosome | CDS | 2268002 | 762 | - | 0.547244 |
yojI | STM2263 | putative ABC-type multidrug/protein/lipid transport system ATPase component | chromosome | CDS | 2360762 | 1644 | - | 0.548662 |
yrbC | STM3310 | putative transport protein | chromosome | CDS | 3476946 | 636 | - | 0.531447 |
yrbD | STM3311 | putative transport protein | chromosome | CDS | 3477600 | 552 | - | 0.51087 |
yrbE | STM3312 | putative transport protein | chromosome | CDS | 3478156 | 783 | - | 0.577267 |
yrbF | STM3313 | putative transport protein | chromosome | CDS | 3478946 | 813 | - | 0.583026 |
Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ECA1486 | ABC transporter ATP-binding protein | chromosome | CDS | 1681842 | 1665 | - | 0.500901 |
NA | ECA2639 | putative hydantoinase | chromosome | CDS | 2967603 | 1569 | - | 0.499044 |
NA | ECA0706 | putative degenerate non-ribosomal peptide synthetase (partial) | chromosome | CDS | 774826 | 291 | - | 0.378007 |
NA | ECA1979 | short chain dehydrogenase | chromosome | CDS | 2246565 | 834 | + | 0.533573 |
NA | ECA2058 | probable short-chain dehydrogenase | chromosome | CDS | 2343795 | 735 | + | 0.557823 |
NA | ECA1221 | short chain dehydrogenase | chromosome | CDS | 1390635 | 771 | - | 0.577173 |
NA | ECA0054 | hypothetical protein | chromosome | CDS | 67694 | 747 | - | 0.580991 |
NA | ECA2511 | hypothetical protein | chromosome | CDS | 2828026 | 780 | + | 0.489744 |
NA | ECA3961 | hypothetical protein | chromosome | CDS | 4432620 | 636 | + | 0.487421 |
NA | ECA2704 | short chain dehydrogenase | chromosome | CDS | 3039428 | 780 | - | 0.480769 |
NA | ECA0482 | putative non-ribosomal peptide synthetase | chromosome | CDS | 551412 | 6351 | + | 0.570934 |
NA | ECA0705 | putative degenerate non-ribosomal peptide synthetase (partial) | chromosome | CDS | 774296 | 438 | - | 0.486301 |
NA | ECA2071 | putative cytochrome P450 | chromosome | CDS | 2359589 | 1218 | - | 0.481938 |
NA | ECA1586 | probable short chain dehydrogenase | chromosome | CDS | 1840176 | 759 | + | 0.562582 |
NA | ECA4504 | putative acyl carrier protein | chromosome | CDS | 5044405 | 267 | - | 0.426966 |
NA | ECA2018 | short chain dehydrogenase | chromosome | CDS | 2290679 | 723 | - | 0.536653 |
NA | ECA4128 | ABC transporter, ATP-binding protein | chromosome | CDS | 4606330 | 693 | - | 0.5671 |
NA | ECA1488 | non-ribosomal peptide synthetase | chromosome | CDS | 1704732 | 22572 | - | 0.572834 |
NA | ECA2928 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 3270545 | 1290 | - | 0.56124 |
NA | ECA0430 | hypothetical protein | chromosome | CDS | 490305 | 831 | + | 0.493381 |
NA | ECA1477 | hypothetical protein | chromosome | CDS | 1673638 | 267 | - | 0.479401 |
NA | ECA1767 | Isochorismatase family protein | chromosome | CDS | 2013994 | 585 | + | 0.473504 |
NA | ECA2925 | probable short chain dehydrogenase | chromosome | CDS | 3268214 | 759 | + | 0.561265 |
NA | ECA3667 | putative lipoprotein | chromosome | CDS | 4117795 | 330 | + | 0.430303 |
NA | ECA1208 | probable short chain dehydrogenase | chromosome | CDS | 1375437 | 882 | + | 0.555556 |
NA | ECA3558 | short chain dehydrogenase | chromosome | CDS | 3989266 | 747 | + | 0.54083 |
NA | ECA4491 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 5032592 | 1227 | - | 0.552567 |
NA | ECA4053 | short chain dehydrogenase | chromosome | CDS | 4518864 | 780 | + | 0.544872 |
NA | ECA2694 | putative polyketide synthetase | chromosome | CDS | 3029319 | 1785 | - | 0.503081 |
NA | ECA2289 | short chain dehydrogenase | chromosome | CDS | 2595189 | 762 | + | 0.534121 |
NA | ECA1544 | putative methyltransferase | chromosome | CDS | 1797750 | 987 | - | 0.577508 |
NA | ECA1588 | hypothetical protein | chromosome | CDS | 1841727 | 384 | + | 0.486979 |
NA | ECA1831 | putative methyltransferase | chromosome | CDS | 2077218 | 765 | + | 0.535948 |
NA | ECA0134 | putative peptidase | chromosome | CDS | 154589 | 1083 | - | 0.633426 |
NA | ECA0296 | hypothetical protein | chromosome | CDS | 343211 | 783 | + | 0.565773 |
NA | ECA1224 | hypothetical protein | chromosome | CDS | 1392768 | 2430 | + | 0.579012 |
NA | ECA1101 | putative ABC transporter ATP-binding protein | chromosome | CDS | 1246646 | 1647 | + | 0.52459 |
NA | ECA3127 | acyl carrier protein | chromosome | CDS | 3493259 | 222 | - | 0.504505 |
NA | ECA4174 | hypothetical protein | chromosome | CDS | 4665267 | 489 | + | 0.543967 |
NA | ECA1738 | hypothetical protein | chromosome | CDS | 1984841 | 750 | + | 0.421333 |
NA | ECA2383 | putative isochorismatase | chromosome | CDS | 2694345 | 714 | + | 0.455182 |
NA | ECA2512 | hypothetical protein | chromosome | CDS | 2828802 | 984 | + | 0.538618 |
NA | ECA2215 | putative short-chain dehydrogenase | chromosome | CDS | 2515094 | 708 | - | 0.556497 |
NA | ECA0295 | ABC transporter, ATP-binding protein | chromosome | CDS | 342391 | 813 | + | 0.544895 |
NA | ECA1209 | probable short chain dehydrogenase | chromosome | CDS | 1376426 | 888 | + | 0.552928 |
NA | ECA1487 | non-ribosomal peptide synthetase | chromosome | CDS | 1683593 | 21147 | - | 0.563059 |
NA | ECA3470 | putative methyltransferase | chromosome | CDS | 3890504 | 771 | + | 0.560311 |
NA | ECA4116 | putative siderophore biosynthesis protein | chromosome | CDS | 4588636 | 1902 | - | 0.536278 |
NA | ECA0483 | putative non-ribosomal peptide synthetase | chromosome | CDS | 557759 | 2115 | + | 0.575887 |
NA | ECA2575 | putative fumarylacetoacetate hydrolase | chromosome | CDS | 2905173 | 885 | - | 0.497175 |
NA | ECA0184 | putative carboxymethylenebutenolidase | chromosome | CDS | 206657 | 828 | - | 0.555556 |
NA | ECA1223 | putative ABC transporter ATP-binding protein | chromosome | CDS | 1392238 | 534 | + | 0.578652 |
NA | ECA3341 | hypothetical protein | chromosome | CDS | 3750235 | 711 | - | 0.47398 |
NA | ECA2366 | fumarylacetoacetate hydrolase family protein | chromosome | CDS | 2677067 | 657 | - | 0.519026 |
NA | ECA4494 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 5035063 | 1158 | - | 0.541451 |
NA | ECA0747 | short chain dehydrogenase | chromosome | CDS | 818265 | 741 | + | 0.578947 |
NA | ECA4503 | acyl carrier protein | chromosome | CDS | 5044136 | 252 | - | 0.428571 |
NA | ECA2152 | hypothetical protein | chromosome | CDS | 2453948 | 795 | - | 0.49434 |
NA | ECA3767 | probable short-chain dehydrogenase | chromosome | CDS | 4207998 | 690 | + | 0.597101 |
NA | ECA0298 | hypothetical protein | chromosome | CDS | 344577 | 630 | + | 0.507937 |
NA | ECA3662 | putative cytochrome | chromosome | CDS | 4111564 | 1389 | - | 0.520518 |
NA | ECA3214 | probable short chain dehydrogenase | chromosome | CDS | 3596586 | 756 | + | 0.511905 |
NA | ECA1857 | hypothetical protein | chromosome | CDS | 2111138 | 417 | + | 0.553957 |
acpP | ECA1798 | acyl carrier protein | chromosome | CDS | 2044934 | 237 | + | 0.434599 |
benE | ECA4471 | putative benzoate transport protein | chromosome | CDS | 5014662 | 1200 | - | 0.558333 |
bioC | ECA2823 | biotin synthesis protein | chromosome | CDS | 3163123 | 762 | - | 0.564304 |
budA | ECA0740 | alpha-acetolactate decarboxylase | chromosome | CDS | 808710 | 783 | + | 0.496807 |
budC | ECA0310 | acetoin reductase | chromosome | CDS | 354581 | 774 | - | 0.520672 |
cfa1 | ECA0608 | Cfa-acyl carrier protein | chromosome | CDS | 679742 | 276 | - | 0.365942 |
cfa3 | ECA0606 | Cfa-beta-ketoacylsynthase | chromosome | CDS | 678109 | 1146 | - | 0.487784 |
cfa5 | ECA0604 | coronafacic acid synthetase, ligase component | chromosome | CDS | 676143 | 1440 | - | 0.516667 |
cfa6 | ECA0603 | type I polyketide synthase | chromosome | CDS | 667988 | 8142 | - | 0.556006 |
cfa7 | ECA0602 | type I polyketide synthase | chromosome | CDS | 661605 | 6387 | - | 0.550023 |
cfa8A | ECA0601 | putative oxidoreductase | chromosome | CDS | 661110 | 432 | - | 0.439815 |
cfl | ECA0609 | coronafacate ligase | chromosome | CDS | 680119 | 1563 | - | 0.357646 |
dltA | ECA3128 | putative D-alanine--poly(phosphoribitol) ligase subunit 1 | chromosome | CDS | 3493498 | 1434 | - | 0.532078 |
ehpB | ECA2702 | putative phenazine antibiotic biosynthesis protein | chromosome | CDS | 3038223 | 621 | - | 0.428341 |
elbB | ECA0316 | enhancing lycopene biosynthesis protein 2 (sigma cross-reacting protein 27a) | chromosome | CDS | 366062 | 654 | + | 0.487768 |
entA | ECA0481 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 550604 | 786 | + | 0.599237 |
entB | ECA0479 | enterobactin synthetase component B (isochorismatase) | chromosome | CDS | 546583 | 876 | + | 0.541096 |
entC | ECA0477 | isochorismate synthase | chromosome | CDS | 543754 | 1197 | + | 0.535505 |
entD | ECA0474 | enterobactin synthetase component D (4'-phosphopantetheinyl transferase) | chromosome | CDS | 539365 | 717 | + | 0.53417 |
entE | ECA0478 | enterobactin synthetase component E [includes: 2,3-dihydroxybenzoate-AMP ligase; S-dihydroxybenzoyltransferase] | chromosome | CDS | 544947 | 1626 | + | 0.575031 |
entF | ECA0480 | enterobactin synthetase component F | chromosome | CDS | 547455 | 3144 | + | 0.576972 |
expI | ECA0105 | N-acylhomoserine lactone synthesis protein | chromosome | CDS | 125689 | 651 | + | 0.37788 |
fabB | ECA3063 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 3420405 | 1218 | - | 0.529557 |
fabF | ECA1799 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2045253 | 1242 | + | 0.529791 |
fabG | ECA1797 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 2044045 | 735 | + | 0.487075 |
fabG | ECA4492 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 5033818 | 732 | - | 0.516393 |
fadD | ECA2372 | acyl-CoA synthase | chromosome | CDS | 2681736 | 1686 | - | 0.514828 |
kduD | ECA2401 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2712101 | 762 | + | 0.507874 |
menE | ECA1215 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 1383651 | 1431 | + | 0.575122 |
menF | ECA1210 | menaquinone-specific isochorismate synthase | chromosome | CDS | 1377747 | 1323 | + | 0.5548 |
nahO | ECA1428 | acetaldehyde dehydrogenase | chromosome | CDS | 1621487 | 891 | + | 0.45679 |
padC | ECA0069 | phenolic acid decarboxylase | chromosome | CDS | 83450 | 510 | + | 0.482353 |
pncA | ECA2341 | pyrazinamidase/nicotinamidase [includes: pyrazinamidase nicotinamidase] | chromosome | CDS | 2652833 | 648 | + | 0.509259 |
prtW | ECA2785 | metalloprotease | chromosome | CDS | 3123040 | 1410 | - | 0.490071 |
pvcA | ECA3381 | pyoverdine biosynthesis protein | chromosome | CDS | 3797644 | 981 | - | 0.46789 |
pvcB | ECA3380 | pyoverdine biosynthesis protein | chromosome | CDS | 3796722 | 933 | - | 0.500536 |
rrmA | ECA2390 | ribosomal RNA large subunit methyltransferase A | chromosome | CDS | 2701800 | 831 | - | 0.523466 |
smtA | ECA2550 | putative S-adenosylmethionine-dependent methyltransferase | chromosome | CDS | 2878626 | 786 | - | 0.515267 |
sufI | ECA0347 | putative cell division protein | chromosome | CDS | 395766 | 1416 | + | 0.558616 |
tehB | ECA0900 | putative tellurite resistance protein | chromosome | CDS | 1003036 | 861 | - | 0.495935 |
vpsC | ECA0297 | hypothetical protein | chromosome | CDS | 343998 | 567 | + | 0.511464 |
Escherichia coli 536, 536 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ECP_1945 | yersiniabactin biosynthetic protein YbtT | chromosome | CDS | 1997082 | 789 | + | 0.586819 |
NA | ECP_2205 | hypothetical protein YeiN | chromosome | CDS | 2298242 | 939 | - | 0.467519 |
NA | ECP_0911 | hypothetical protein YcaC | chromosome | CDS | 958714 | 627 | - | 0.46571 |
NA | ECP_1223 | putative fumarylacetoacetate (FAA) hydrolase family | chromosome | CDS | 1249261 | 660 | + | 0.527273 |
NA | ECP_0037 | probable crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 37825 | 1569 | - | 0.50733 |
NA | ECP_1249 | glycerol metabolism operon regulatory protein | chromosome | CDS | 1277435 | 1920 | + | 0.514583 |
NA | ECP_1436 | putative benzoate membrane transport protein | chromosome | CDS | 1479245 | 1266 | - | 0.527646 |
NA | ECP_2468 | ethanolamine utilization protein EutN | chromosome | CDS | 2583665 | 288 | - | 0.534722 |
NA | ECP_4458 | putative oxoacyl reductase | chromosome | CDS | 4665022 | 792 | - | 0.52904 |
NA | ECP_4038 | hypothetical isochorismatase family protein YcdL | chromosome | CDS | 4214839 | 669 | - | 0.499253 |
NA | ECP_1970 | putative non-ribosomal peptide synthase | chromosome | CDS | 2029592 | 6465 | - | 0.563496 |
NA | ECP_2254 | hypothetical ABC transporter | chromosome | CDS | 2344656 | 984 | - | 0.533537 |
NA | ECP_3587 | hypothetical protein YhiQ | chromosome | CDS | 3751796 | 795 | - | 0.586164 |
NA | ECP_1973 | probable peptide synthetase protein | chromosome | CDS | 2045693 | 4797 | - | 0.553888 |
NA | ECP_0305 | putative ATP binding cassette (ABC) transporter | chromosome | CDS | 324717 | 3738 | - | 0.578919 |
NA | ECP_0932 | S-adenosylmethionine-dependent methltransferase | chromosome | CDS | 984095 | 786 | + | 0.516539 |
NA | ECP_1814 | protein YecO | chromosome | CDS | 1864430 | 744 | + | 0.504032 |
NA | ECP_1943 | yersiniabactin biosynthetic protein | chromosome | CDS | 1986482 | 9492 | + | 0.606405 |
NA | ECP_0791 | biotin synthesis protein BioC | chromosome | CDS | 827554 | 756 | + | 0.56746 |
NA | ECP_0216 | probable methyltransferase YafE | chromosome | CDS | 236068 | 771 | + | 0.491569 |
NA | ECP_1748 | long-chain-fatty-acid-CoA ligase | chromosome | CDS | 1799911 | 1719 | - | 0.511344 |
NA | ECP_1811 | hypothetical isochorismatase family protein YecD | chromosome | CDS | 1862560 | 567 | + | 0.530864 |
NA | ECP_2449 | pxidoreductase UcpA | chromosome | CDS | 2564665 | 792 | - | 0.551768 |
NA | ECP_1964 | putative thioesterase | chromosome | CDS | 2017539 | 723 | - | 0.460581 |
NA | ECP_3695 | hypothetical protein YibH | chromosome | CDS | 3871559 | 1137 | - | 0.533861 |
NA | ECP_1972 | probable polyketide synthase protein | chromosome | CDS | 2042611 | 3033 | - | 0.569073 |
NA | ECP_4325 | hypothetical protein YjcS | chromosome | CDS | 4537337 | 1986 | - | 0.519637 |
NA | ECP_0809 | hypothetical membrane protein YbhG | chromosome | CDS | 844853 | 996 | - | 0.580321 |
NA | ECP_1344 | putative multidrug-efflux transport protein | chromosome | CDS | 1375323 | 1122 | + | 0.510695 |
NA | ECP_1960 | hypothetical protein YeeO | chromosome | CDS | 2013616 | 1488 | + | 0.495296 |
NA | ECP_1944 | yersiniabactin biosynthetic protein YbtU | chromosome | CDS | 1995970 | 1101 | + | 0.604905 |
NA | ECP_1590 | hypothetical protein | chromosome | CDS | 1640625 | 858 | + | 0.505827 |
NA | ECP_0627 | Isochorismatase | chromosome | CDS | 663636 | 858 | + | 0.554779 |
NA | ECP_3578 | hypothetical ABC transporter ATP-binding protein YhiH | chromosome | CDS | 3740134 | 2736 | - | 0.56652 |
NA | ECP_3827 | hemolysin A | chromosome | CDS | 3993570 | 3075 | + | 0.413333 |
NA | ECP_3281 | hypothetical protein | chromosome | CDS | 3448774 | 783 | - | 0.54917 |
NA | ECP_4014 | hypothetical protein YigI (putative thioesterase) | chromosome | CDS | 4188764 | 468 | - | 0.532051 |
NA | ECP_2253 | hypothetical ABC transporter | chromosome | CDS | 2343996 | 657 | - | 0.52968 |
NA | ECP_1085 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 1141549 | 735 | + | 0.515646 |
NA | ECP_1465 | N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 1505549 | 846 | + | 0.503546 |
NA | ECP_1939 | inner membrane ABC-transporter YbtQ | chromosome | CDS | 1975379 | 1803 | - | 0.584581 |
NA | ECP_3579 | hypothetical protein YhiI precursor | chromosome | CDS | 3742866 | 1068 | - | 0.581461 |
NA | ECP_1765 | ribosomal RNA large subunit methyltransferase A | chromosome | CDS | 1818101 | 810 | - | 0.511111 |
NA | ECP_2115 | multidrug transporter | chromosome | CDS | 2192382 | 3123 | + | 0.565482 |
NA | ECP_0901 | transport ATP-binding protein CydD | chromosome | CDS | 942988 | 1767 | - | 0.531975 |
NA | ECP_1716 | pyrazinamidase/nicotinamidase | chromosome | CDS | 1769295 | 642 | + | 0.531153 |
NA | ECP_2362 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 2472218 | 1221 | - | 0.561835 |
NA | ECP_2114 | hypothetical protein YegM precursor | chromosome | CDS | 2191135 | 1248 | + | 0.546474 |
NA | ECP_0893 | macrolide-specific efflux protein MacA precursor | chromosome | CDS | 932968 | 1116 | + | 0.533154 |
NA | ECP_1978 | putative polyketide synthase | chromosome | CDS | 2054093 | 2601 | - | 0.551326 |
NA | ECP_1320 | hypothetical oxidoreductase YciK | chromosome | CDS | 1351462 | 759 | - | 0.524374 |
NA | ECP_0808 | hypothetical ABC transporter ATP-binding protein YbhF | chromosome | CDS | 843124 | 1737 | - | 0.557283 |
NA | ECP_0431 | alpha-ketoglutarate-dependent taurine dioxygenase | chromosome | CDS | 456513 | 852 | + | 0.543427 |
NA | ECP_0559 | hypothetical oxidoreductase YbbO | chromosome | CDS | 588204 | 771 | - | 0.547341 |
NA | ECP_3613 | hypothetical integral membrane protein YhiV | chromosome | CDS | 3774817 | 3114 | + | 0.530186 |
NA | ECP_2577 | hypothetical protein YfiC | chromosome | CDS | 2717437 | 738 | - | 0.52168 |
NA | ECP_1391 | multidrug resistance protein A | chromosome | CDS | 1422545 | 1029 | + | 0.462585 |
NA | ECP_3279 | hypothetical protein YrbC (putative toluene tolerance protein) | chromosome | CDS | 3447564 | 636 | - | 0.522013 |
NA | ECP_1010 | hypothetical isochorismatase family protein YcdL | chromosome | CDS | 1066585 | 693 | - | 0.551227 |
NA | ECP_4238 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 4443695 | 807 | - | 0.51425 |
NA | ECP_4262 | DNA-damage-inducible protein F | chromosome | CDS | 4469569 | 1380 | + | 0.548551 |
NA | ECP_4338 | HisM-like integral membrane protein PhnM | chromosome | CDS | 4548688 | 1137 | - | 0.604222 |
NA | ECP_3062 | putative acyl carrier protein | chromosome | CDS | 3227972 | 228 | + | 0.412281 |
NA | ECP_0605 | putative copper efflux system protein CusB precursor | chromosome | CDS | 634873 | 1224 | + | 0.560458 |
NA | ECP_0510 | multidrug resistance-like ATP-binding protein MdlB | chromosome | CDS | 537876 | 1782 | + | 0.559484 |
NA | ECP_3829 | hemolysin D | chromosome | CDS | 3998857 | 1437 | + | 0.392484 |
NA | ECP_3085 | predicted hydrolase | chromosome | CDS | 3248724 | 891 | - | 0.52413 |
NA | ECP_2304 | O-succinylbenzoic acid-CoA ligase | chromosome | CDS | 2410458 | 1356 | - | 0.569322 |
NA | ECP_0219 | hypothetical protein YafS | chromosome | CDS | 239103 | 726 | + | 0.49449 |
NA | ECP_0626 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 662012 | 1611 | + | 0.565487 |
NA | ECP_1241 | hypothetical protein | chromosome | CDS | 1268132 | 813 | - | 0.549815 |
NA | ECP_3280 | hypothetical protein YrbD precursor | chromosome | CDS | 3448218 | 552 | - | 0.494565 |
NA | ECP_2309 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2416158 | 1296 | - | 0.530864 |
NA | ECP_1086 | acyl carrier protein | chromosome | CDS | 1142494 | 237 | + | 0.481013 |
NA | ECP_4555 | hemolysin A | chromosome | CDS | 4763630 | 3075 | - | 0.416911 |
NA | ECP_4323 | putative HlyD family secretion protein YjcR | chromosome | CDS | 4535803 | 1032 | - | 0.561047 |
NA | ECP_0130 | blue copper oxidase CueO precursor | chromosome | CDS | 142145 | 1551 | + | 0.540941 |
NA | ECP_3106 | suppressor of FtsI | chromosome | CDS | 3270579 | 1413 | - | 0.564756 |
NA | ECP_4039 | putative carboxymethylenebutenolidase | chromosome | CDS | 4215764 | 810 | - | 0.541975 |
NA | ECP_0629 | hypothetical protein YbdB | chromosome | CDS | 665242 | 414 | + | 0.584541 |
NA | ECP_1415 | hypothetical protein YnbC | chromosome | CDS | 1455231 | 1758 | + | 0.515358 |
NA | ECP_1971 | putative non-ribosomal peptide synthase | chromosome | CDS | 2036067 | 6501 | - | 0.561144 |
NA | ECP_1967 | non-ribosomal peptide synthetase | chromosome | CDS | 2022271 | 4368 | - | 0.538004 |
NA | ECP_1815 | hypothetical protein YecP | chromosome | CDS | 1865170 | 972 | + | 0.52572 |
NA | ECP_2665 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 2804620 | 780 | + | 0.533333 |
NA | ECP_2393 | multidrug resistance protein K | chromosome | CDS | 2505611 | 1041 | - | 0.424592 |
NA | ECP_1563 | 7-alpha-hydroxysteroid dehydrogenase | chromosome | CDS | 1616531 | 768 | - | 0.471354 |
NA | ECP_1550 | hypothetical oxidoreductase YdgB | chromosome | CDS | 1600408 | 723 | + | 0.514523 |
NA | ECP_0614 | enterobactin synthetase component D | chromosome | CDS | 645579 | 630 | - | 0.484127 |
NA | ECP_0523 | acriflavine resistance protein B | chromosome | CDS | 548496 | 3150 | - | 0.534286 |
NA | ECP_1946 | yersiniabactin siderophore biosynthetic protein YbtE | chromosome | CDS | 1997874 | 1578 | + | 0.588086 |
NA | ECP_0900 | transport ATP-binding protein CydC | chromosome | CDS | 941266 | 1722 | - | 0.535424 |
NA | ECP_1966 | putative polyketide synthase | chromosome | CDS | 2019781 | 2460 | - | 0.521138 |
NA | ECP_3297 | eNhancing lycopene biosynthesis protein 2 | chromosome | CDS | 3460113 | 654 | - | 0.522936 |
NA | ECP_1940 | putative inner membrane ABC-transporter (YbtP) | chromosome | CDS | 1977168 | 1713 | - | 0.579101 |
NA | ECP_2855 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3013153 | 762 | - | 0.519685 |
NA | ECP_4515 | gluconate 5-dehydrogenase | chromosome | CDS | 4731325 | 765 | - | 0.494118 |
NA | ECP_1633 | hypothetical protein | chromosome | CDS | 1680183 | 411 | - | 0.508516 |
NA | ECP_1345 | multidrug efflux protein | chromosome | CDS | 1376444 | 3108 | + | 0.519305 |
NA | ECP_1979 | putative polyketide synthase | chromosome | CDS | 2056734 | 9621 | - | 0.533417 |
NA | ECP_3828 | alpha-hemolysin translocation ATP-binding protein HlyB | chromosome | CDS | 3996715 | 2124 | + | 0.403484 |
NA | ECP_1648 | hypothetical protein YdiD | chromosome | CDS | 1697764 | 1701 | + | 0.502058 |
NA | ECP_1087 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1142817 | 1242 | + | 0.533816 |
NA | ECP_1976 | putative D-alanyl carrier protein | chromosome | CDS | 2052936 | 249 | - | 0.39759 |
NA | ECP_2176 | hypothetical oxidoreductase YohF | chromosome | CDS | 2267357 | 762 | - | 0.548556 |
NA | ECP_4553 | hemolysin D | chromosome | CDS | 4759981 | 1437 | - | 0.392484 |
NA | ECP_4554 | alpha-hemolysin translocation ATP-binding protein HlyB | chromosome | CDS | 4761436 | 2124 | - | 0.403484 |
NA | ECP_2747 | hypothetical oxidoreductase YgcW | chromosome | CDS | 2884969 | 786 | - | 0.455471 |
Escherichia coli APEC O1, APEC O1 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | APECO1_318 | glycerol metabolism operon regulatory protein | chromosome | CDS | 1268114 | 1929 | + | 0.514256 |
NA | APECO1_2283 | putative propanediol utilization protein | chromosome | CDS | 4740855 | 687 | - | 0.563319 |
NA | APECO1_3445 | putative saframycin Mx1 synthetase B | chromosome | CDS | 3407083 | 1725 | + | 0.525217 |
NA | APECO1_3423 | putative hydrolase | chromosome | CDS | 3430586 | 927 | - | 0.523193 |
NA | APECO1_1055 | putative ABC transporter protein | chromosome | CDS | 2094855 | 1830 | - | 0.58306 |
NA | APECO1_1452 | hypothetical protein | chromosome | CDS | 614819 | 414 | + | 0.584541 |
NA | APECO1_2448 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 4553163 | 807 | - | 0.513011 |
NA | APECO1_310 | hypothetical protein | chromosome | CDS | 1258821 | 813 | - | 0.549815 |
NA | APECO1_2632 | putative isochorismatase hydrolase | chromosome | CDS | 4327324 | 669 | - | 0.502242 |
NA | APECO1_2631 | putative dienelactone hydrolase | chromosome | CDS | 4328249 | 876 | - | 0.527397 |
NA | APECO1_2303 | hypothetical protein | chromosome | CDS | 4722436 | 642 | - | 0.524922 |
NA | APECO1_2182 | hypothetical protein | chromosome | CDS | 4842938 | 897 | - | 0.512821 |
NA | APECO1_102 | hypothetical protein | chromosome | CDS | 1058060 | 735 | - | 0.563265 |
aas | APECO1_3670 | bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-acyl carrier protein synthetase | chromosome | CDS | 3181387 | 2160 | - | 0.522222 |
acrA | APECO1_1551 | acriflavine resistance protein A precursor | chromosome | CDS | 500155 | 1194 | - | 0.536851 |
acrF | APECO1_3173 | acriflavine resistance protein F | chromosome | CDS | 3705903 | 3105 | + | 0.510467 |
bioC | APECO1_1312 | biotin synthesis protein BioC | chromosome | CDS | 776181 | 795 | + | 0.56478 |
caiC | APECO1_1944 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 38887 | 1569 | - | 0.507967 |
cchB | APECO1_4101 | putative carboxysome structural protein, ethanolamine utilization | chromosome | CDS | 2693944 | 288 | - | 0.538194 |
ccmA | APECO1_4358 | heme exporter protein A | chromosome | CDS | 2406591 | 624 | - | 0.554487 |
cueO | APECO1_1862 | multicopper oxidase (laccase) | chromosome | CDS | 143245 | 1551 | + | 0.539652 |
cusB | APECO1_1474 | copper/silver efflux system, membrane fusion protein | chromosome | CDS | 584531 | 1224 | + | 0.558007 |
cydD | APECO1_1202 | Transport ATP-binding protein | chromosome | CDS | 900999 | 1767 | - | 0.532541 |
emrK | APECO1_4168 | EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein | chromosome | CDS | 2615981 | 1056 | - | 0.422348 |
entA | APECO1_1453 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 614040 | 777 | + | 0.570142 |
entB | APECO1_1454 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase | chromosome | CDS | 613213 | 858 | + | 0.548951 |
entC | APECO1_1456 | isochorismate synthase | chromosome | CDS | 610392 | 1188 | + | 0.558081 |
entD | APECO1_1466 | 4'-phosphopantetheinyl transferase EntD | chromosome | CDS | 595164 | 771 | - | 0.485084 |
entE | APECO1_1455 | 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex | chromosome | CDS | 611589 | 1611 | + | 0.564867 |
entF | APECO1_1463 | enterobactin synthase multienzyme complex component, ATP-dependent | chromosome | CDS | 599724 | 4020 | + | 0.565423 |
eutM | APECO1_4100 | putative detox protein in ethanolamine utilization | chromosome | CDS | 2694338 | 336 | - | 0.568452 |
eutN | APECO1_2286 | ethanolamine utilization protein EutN | chromosome | CDS | 4739052 | 270 | - | 0.533333 |
fabB | APECO1_4241 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2545488 | 1221 | - | 0.561016 |
fabF | APECO1_176 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1134290 | 1242 | + | 0.533816 |
fabG | APECO1_174 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1133022 | 735 | + | 0.515646 |
fadD | APECO1_863 | long chain fatty acid CoA-ligase | chromosome | CDS | 1895975 | 1752 | - | 0.509132 |
hdhA | APECO1_702 | 7-alpha-hydroxysteroid dehydrogenase | chromosome | CDS | 1718757 | 768 | - | 0.471354 |
hlyD | APECO1_490 | putative secretion protein | chromosome | CDS | 1458313 | 1032 | + | 0.463178 |
ibeR | APECO1_2094 | putative regulatory protein IbeR | chromosome | CDS | 4951124 | 1950 | + | 0.39641 |
idnO | APECO1_2128 | gluconate 5-dehydrogenase | chromosome | CDS | 4909242 | 765 | - | 0.49281 |
irp1 | APECO1_1059 | yersiniabactin biosynthetic protein | chromosome | CDS | 2105958 | 9162 | + | 0.606745 |
irp2 | APECO1_1058 | yersiniabactin biosynthetic protein | chromosome | CDS | 2099745 | 6126 | + | 0.600718 |
kduD | APECO1_3664 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3190030 | 762 | - | 0.51706 |
macA | APECO1_1216 | macrolide-specific efflux protein MacA precursor | chromosome | CDS | 881621 | 1116 | + | 0.533154 |
mdlB | APECO1_1562 | multidrug resistance-like ATP-binding protein MdlB | chromosome | CDS | 486250 | 1896 | + | 0.560127 |
mdtF | APECO1_2934 | putative multidrug transporter MdtF, RpoS-dependent | chromosome | CDS | 3959988 | 3114 | + | 0.530507 |
menE | APECO1_4301 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2482358 | 1356 | - | 0.565634 |
menF | APECO1_4296 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2488058 | 1296 | - | 0.532407 |
nhoA | APECO1_600 | N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 1591655 | 846 | + | 0.503546 |
phnM | APECO1_2355 | PhnM, carbon-phosphorus lyase complex subunit | chromosome | CDS | 4662629 | 1137 | - | 0.597186 |
rbbA | APECO1_2964 | fused ribosome-associated ATPase: ATP-binding protein, predicted membrane protein | chromosome | CDS | 3925306 | 2736 | - | 0.563596 |
smtA | APECO1_33 | SmtA | chromosome | CDS | 976997 | 798 | + | 0.516291 |
srlD | APECO1_3821 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 3001296 | 780 | + | 0.532051 |
sufI | APECO1_3402 | repressor protein for FtsI | chromosome | CDS | 3452441 | 1413 | - | 0.558386 |
tam | APECO1_639 | putative trans-aconitate 2-methyltransferase | chromosome | CDS | 1645803 | 759 | + | 0.545455 |
tehB | APECO1_576 | Tellurite resistance protein TehB | chromosome | CDS | 1563751 | 594 | + | 0.46633 |
ucpA | APECO1_4120 | oxidoreductase UcpA | chromosome | CDS | 2675044 | 792 | - | 0.551768 |
yafE | APECO1_1780 | hypothetical protein | chromosome | CDS | 236726 | 771 | + | 0.491569 |
yafS | APECO1_1777 | putative S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 239744 | 741 | + | 0.497976 |
ybcY | APECO1_1483 | conserved hypothetical protein YbcY precursor | chromosome | CDS | 571757 | 666 | - | 0.40991 |
ybhF | APECO1_1296 | putative ABC-type transport protein YbhF | chromosome | CDS | 791790 | 1752 | - | 0.557648 |
ybhG | APECO1_1295 | conserved hypothetical membrane protein ybhG | chromosome | CDS | 793519 | 999 | - | 0.577578 |
ybtE | APECO1_1062 | yersiniabactin siderophore biosynthetic protein | chromosome | CDS | 2117348 | 1578 | + | 0.588086 |
ybtP | APECO1_1056 | putative inner membrane ABC-transporter | chromosome | CDS | 2096644 | 1803 | - | 0.571825 |
ybtT | APECO1_1061 | yersiniabactin biosynthetic protein YbtT | chromosome | CDS | 2116541 | 804 | + | 0.587065 |
ycaC | APECO1_1192 | hypothetical protein | chromosome | CDS | 916788 | 726 | - | 0.464187 |
ycgM | APECO1_293 | putative isomerase | chromosome | CDS | 1239936 | 660 | + | 0.525758 |
yciK | APECO1_431 | hypothetical oxidoreductase YciK | chromosome | CDS | 1387215 | 759 | - | 0.523057 |
ydgB | APECO1_689 | putative oxidoreductase | chromosome | CDS | 1702634 | 723 | + | 0.50899 |
ydhJ | APECO1_726 | hypothetical protein | chromosome | CDS | 1742644 | 744 | + | 0.495968 |
ydiD | APECO1_777 | short chain acyl-CoA synthetase, anaerobic | chromosome | CDS | 1799791 | 1701 | + | 0.50147 |
ydiI | APECO1_763 | hypothetical protein | chromosome | CDS | 1782209 | 411 | - | 0.506083 |
ydjB | APECO1_837 | pyrazinamidase/nicotinamidase | chromosome | CDS | 1865342 | 660 | + | 0.527273 |
yebH | APECO1_879 | ribosomal RNA large subunit methyltransferase A | chromosome | CDS | 1914165 | 810 | - | 0.511111 |
yecD | APECO1_917 | hypothetical protein | chromosome | CDS | 1958692 | 567 | + | 0.536155 |
yecO | APECO1_920 | hypothetical protein | chromosome | CDS | 1960562 | 744 | + | 0.5 |
yecP | APECO1_921 | hypothetical protein | chromosome | CDS | 1961302 | 972 | + | 0.526749 |
yeeO | APECO1_6020 | hypothetical protein | chromosome | CDS | 2130624 | 1491 | - | 0.492958 |
yegM | APECO1_1164 | hypothetical protein | chromosome | CDS | 2240755 | 1395 | + | 0.53405 |
yegO | APECO1_1166 | hypothetical protein | chromosome | CDS | 2245272 | 3078 | + | 0.562378 |
yeiN | APECO1_4389 | hypothetical protein | chromosome | CDS | 2370135 | 939 | - | 0.468584 |
ygcW | APECO1_3759 | putative oxidoreductase YgcW | chromosome | CDS | 3066758 | 861 | - | 0.45993 |
yghA | APECO1_3420 | putative oxidoreductase YghA | chromosome | CDS | 3433392 | 888 | + | 0.539414 |
yhiI | APECO1_2963 | hypothetical protein | chromosome | CDS | 3928038 | 1068 | - | 0.582397 |
yhiQ | APECO1_2956 | hypothetical protein | chromosome | CDS | 3936968 | 858 | - | 0.590909 |
yibH | APECO1_2860 | hypothetical protein | chromosome | CDS | 4058741 | 1137 | - | 0.531223 |
yigI | APECO1_2656 | hypothetical protein | chromosome | CDS | 4301248 | 486 | - | 0.520576 |
yjcR | APECO1_2369 | putative membrane fusion protein of efflux pump | chromosome | CDS | 4649743 | 1032 | - | 0.561047 |
yjcS | APECO1_2367 | hypothetical protein | chromosome | CDS | 4651276 | 1998 | - | 0.524525 |
yohF | APECO1_4412 | putative oxidoreductase | chromosome | CDS | 2340476 | 762 | - | 0.551181 |
yojI | APECO1_4348 | putative ABC transporter ATP-binding protein YojI | chromosome | CDS | 2415977 | 1644 | - | 0.526156 |
yrbD | APECO1_3242 | putative ABC-type organic solvent transporter | chromosome | CDS | 3630500 | 552 | - | 0.492754 |
yrbE | APECO1_3241 | putative toluene transporter subunit: permease component | chromosome | CDS | 3631056 | 783 | - | 0.550447 |
Escherichia coli CFT073, CFT073 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | c2427 | Putative peptide/polyketide synthetase protein | chromosome | CDS | 2234022 | 2196 | + | 0.606102 |
NA | c0651 | Hypothetical protein ybcY precursor | chromosome | CDS | 628200 | 666 | - | 0.412913 |
NA | c1659 | Glycerol metabolism operon Regulatory protein | chromosome | CDS | 1494264 | 1929 | + | 0.516848 |
NA | c0321 | gluconate 5-dehydrogenase | chromosome | CDS | 291188 | 801 | + | 0.380774 |
NA | c1203 | Putative O-methyltransferase | chromosome | CDS | 1157236 | 1059 | - | 0.458924 |
NA | c1186 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1143727 | 1230 | - | 0.552846 |
NA | c2424 | Putative peptide synthetase | chromosome | CDS | 2227110 | 4269 | + | 0.600141 |
NA | c2461 | hypothetical protein | chromosome | CDS | 2293239 | 4812 | - | 0.5532 |
NA | c1474 | Hypothetical protein ybcY precursor | chromosome | CDS | 1371829 | 666 | - | 0.414414 |
NA | c2451 | Putative thioesterase | chromosome | CDS | 2265084 | 723 | - | 0.460581 |
NA | c3714 | hypothetical protein | chromosome | CDS | 3547885 | 249 | + | 0.405622 |
NA | c4548 | hypothetical protein | chromosome | CDS | 4325744 | 642 | + | 0.52648 |
NA | c2426 | Putative peptide synthetase | chromosome | CDS | 2231817 | 2130 | + | 0.5723 |
NA | c4525 | Putative chormophorylate of CpcA | chromosome | CDS | 4307287 | 687 | + | 0.564774 |
NA | c4986 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 4763989 | 807 | - | 0.51425 |
NA | c1199 | acyl carrier protein | chromosome | CDS | 1155160 | 252 | - | 0.480159 |
NA | c3736 | Putative enzyme | chromosome | CDS | 3568730 | 927 | - | 0.522114 |
NA | c4532 | hypothetical protein | chromosome | CDS | 4311760 | 252 | + | 0.492063 |
NA | c2460 | Putative polyketide synthase | chromosome | CDS | 2290157 | 3033 | - | 0.569073 |
NA | c2670 | hypothetical protein | chromosome | CDS | 2518639 | 309 | - | 0.540453 |
NA | c2432 | Putative thioesterase | chromosome | CDS | 2244762 | 657 | + | 0.579909 |
NA | c1200 | Putative acyl carrier protein | chromosome | CDS | 1155423 | 258 | - | 0.492248 |
NA | c1648 | hypothetical protein | chromosome | CDS | 1484977 | 708 | - | 0.560734 |
NA | c2430 | hypothetical protein | chromosome | CDS | 2243518 | 1101 | + | 0.604905 |
NA | c3712 | acyl-CoA synthase | chromosome | CDS | 3545212 | 1731 | + | 0.528018 |
NA | c2428 | hypothetical protein | chromosome | CDS | 2236117 | 2898 | + | 0.613872 |
NA | c2466 | hypothetical protein | chromosome | CDS | 2300482 | 249 | - | 0.39759 |
NA | c4771 | Putative carboxymethylenebutenolidase | chromosome | CDS | 4535659 | 876 | - | 0.52968 |
NA | c2459 | Putative peptide synthetase | chromosome | CDS | 2283613 | 6501 | - | 0.561144 |
NA | c2458 | Putative peptide synthetase | chromosome | CDS | 2277138 | 6465 | - | 0.56365 |
NA | c2453 | Putative polyketide synthase | chromosome | CDS | 2267326 | 2460 | - | 0.521138 |
NA | c4769 | hypothetical protein | chromosome | CDS | 4534734 | 600 | - | 0.505 |
NA | c2470 | Putative peptide/polyketide synthase | chromosome | CDS | 2308283 | 5628 | - | 0.515814 |
NA | c2455 | Putative peptide synthetase | chromosome | CDS | 2270909 | 3363 | - | 0.535236 |
NA | c1628 | Protein ycgM | chromosome | CDS | 1466093 | 660 | + | 0.527273 |
NA | c0289 | hypothetical protein | chromosome | CDS | 269022 | 357 | - | 0.565826 |
NA | c4528 | Ethanolamine utilization protein eutN | chromosome | CDS | 4309507 | 270 | + | 0.537037 |
NA | c2429 | hypothetical protein | chromosome | CDS | 2238812 | 4710 | + | 0.602548 |
NA | c2669 | hypothetical protein | chromosome | CDS | 2518186 | 387 | - | 0.565891 |
NA | c0137 | hypothetical protein | chromosome | CDS | 130380 | 291 | + | 0.38488 |
NA | c2469 | Putative polyketide synthase | chromosome | CDS | 2304280 | 4059 | - | 0.558266 |
NA | c2972 | Ethanolamine utilization protein eutK precursor | chromosome | CDS | 2832776 | 507 | - | 0.579882 |
NA | c2434 | Putative salicyl-AMP ligase | chromosome | CDS | 2246714 | 285 | + | 0.582456 |
NA | c1189 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1146145 | 1179 | - | 0.603053 |
NA | c2433 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 2245422 | 1248 | + | 0.590545 |
NA | c2468 | Putative polyketide synthase | chromosome | CDS | 2301639 | 2610 | - | 0.550192 |
NA | c2454 | hypothetical protein | chromosome | CDS | 2269816 | 1116 | - | 0.552867 |
acpP | c1364 | acyl carrier protein | chromosome | CDS | 1295117 | 237 | + | 0.481013 |
bioC | c0857 | Biotin synthesis protein bioC | chromosome | CDS | 834258 | 795 | + | 0.557233 |
caiC | c0046 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 38930 | 1569 | - | 0.507967 |
cchA | c2982 | Ethanolamine utilization protein eutM precursor | chromosome | CDS | 2842915 | 336 | - | 0.568452 |
cchB | c2981 | Ethanolamine utilization protein eutN | chromosome | CDS | 2842521 | 288 | - | 0.538194 |
entA | c0683 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 670624 | 747 | + | 0.570281 |
entB | c0682 | Isochorismatase | chromosome | CDS | 669767 | 858 | + | 0.550117 |
entC | c0680 | isochorismate synthase | chromosome | CDS | 666946 | 1188 | + | 0.554714 |
entD | c0668 | 4'-phosphopantetheinyl transferase entD | chromosome | CDS | 651687 | 771 | - | 0.478599 |
entE | c0681 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 668143 | 1611 | + | 0.564867 |
entF | c0673 | Enterobactin synthetase component F | chromosome | CDS | 656385 | 3882 | + | 0.559505 |
fabB | c2869 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2722183 | 1221 | - | 0.561835 |
fabF | c1365 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1295440 | 1242 | + | 0.534622 |
fabG | c5303 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 5043561 | 792 | - | 0.534091 |
fabG | c1187 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1144953 | 732 | - | 0.56694 |
fadD | c2209 | acyl-CoA synthase | chromosome | CDS | 2039733 | 1752 | - | 0.510274 |
hdhA | c2011 | 7-alpha-hydroxysteroid dehydrogenase | chromosome | CDS | 1857794 | 768 | - | 0.472656 |
idnO | c5367 | gluconate 5-dehydrogenase | chromosome | CDS | 5111524 | 765 | - | 0.495425 |
iucA | c3627 | IucA protein | chromosome | CDS | 3467418 | 1788 | - | 0.535794 |
iucC | c3625 | IucC protein | chromosome | CDS | 3464728 | 1743 | - | 0.547332 |
iucD | c3624 | IucD protein | chromosome | CDS | 3463394 | 1338 | - | 0.464126 |
kduD | c3439 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3290530 | 762 | - | 0.524934 |
menE | c2803 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2660030 | 1356 | - | 0.564159 |
menF | c2809 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2665730 | 1296 | - | 0.532407 |
nhoA | c1895 | N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 1728791 | 846 | + | 0.503546 |
smtA | c1063 | Protein smtA | chromosome | CDS | 1024485 | 798 | + | 0.517544 |
srlD | c3259 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 3110206 | 780 | + | 0.534615 |
sufI | c3757 | Protein sufI precursor | chromosome | CDS | 3590586 | 1413 | - | 0.559094 |
tauD | c0476 | Alpha-ketoglutarate-dependent taurine dioxygenase | chromosome | CDS | 463087 | 852 | + | 0.543427 |
tehB | c1854 | Tellurite resistance protein tehB | chromosome | CDS | 1694048 | 594 | + | 0.468013 |
ucpA | c2960 | short chain dehydrogenase | chromosome | CDS | 2823621 | 948 | - | 0.528481 |
yacK | c0152 | Blue copper oxidase cueO precursor | chromosome | CDS | 147373 | 1590 | + | 0.53522 |
yafE | c0247 | Hypothetical protein yafE | chromosome | CDS | 243401 | 771 | + | 0.490272 |
yafS | c0250 | Hypothetical protein yafS | chromosome | CDS | 246421 | 741 | + | 0.493927 |
ybbA | c0616 | Hypothetical ABC transporter ATP-binding protein ybbA | chromosome | CDS | 595694 | 687 | + | 0.557496 |
ybbO | c0614 | short chain dehydrogenase | chromosome | CDS | 594301 | 810 | - | 0.540741 |
ybbP | c0617 | Hypothetical protein ybbP | chromosome | CDS | 596377 | 2415 | + | 0.583437 |
ybdB | c0684 | Hypothetical protein ybdB | chromosome | CDS | 671373 | 414 | + | 0.584541 |
ycaC | c1034 | Protein ycaC | chromosome | CDS | 999114 | 726 | - | 0.464187 |
ycdL | c1148 | Hypothetical isochorismatase family protein ycdL | chromosome | CDS | 1105666 | 735 | - | 0.559184 |
yciK | c1736 | short chain dehydrogenase | chromosome | CDS | 1571954 | 759 | - | 0.524374 |
ydcO | c1857 | Hypothetical protein ydcO | chromosome | CDS | 1695647 | 1296 | - | 0.524691 |
ydgB | c1998 | short chain dehydrogenase | chromosome | CDS | 1841671 | 723 | + | 0.51314 |
ydiD | c2097 | hypothetical protein | chromosome | CDS | 1938945 | 1701 | + | 0.500882 |
ydiI | c2081 | Hypothetical protein ydiI | chromosome | CDS | 1921363 | 411 | - | 0.508516 |
ydjB | c2172 | Nicotinamidase | chromosome | CDS | 2009098 | 660 | + | 0.527273 |
yebH | c2229 | Ribosomal RNA large subunit methyltransferase A | chromosome | CDS | 2057923 | 810 | - | 0.512346 |
yecD | c2281 | Hypothetical isochorismatase family protein yecD | chromosome | CDS | 2102370 | 582 | + | 0.52921 |
yecO | c2284 | Protein yecO | chromosome | CDS | 2104255 | 744 | + | 0.504032 |
yecP | c2285 | Hypothetical protein yecP | chromosome | CDS | 2104995 | 972 | + | 0.52572 |
ygcW | c3332 | Hypothetical oxidoreductase ygcW | chromosome | CDS | 3173277 | 861 | - | 0.4518 |
yghA | c3739 | oxidoreductase | chromosome | CDS | 3571536 | 888 | + | 0.539414 |
yhbL | c3969 | Enhancing lycopene biosynthesis protein 2 | chromosome | CDS | 3783298 | 654 | - | 0.522936 |
yhiQ | c4296 | Hypothetical protein yhiQ | chromosome | CDS | 4076338 | 816 | - | 0.590686 |
yigI | c4741 | Hypothetical protein yigI | chromosome | CDS | 4508659 | 486 | - | 0.522634 |
yjcS | c5089 | Hypothetical protein yjcS | chromosome | CDS | 4863771 | 1998 | - | 0.518519 |
ynbC | c1836 | Hypothetical protein ynbC | chromosome | CDS | 1673255 | 1758 | + | 0.515358 |
yojI | c2752 | Hypothetical ABC transporter ATP-binding protein yojI | chromosome | CDS | 2593915 | 1644 | - | 0.531022 |
yrbC | c3952 | Protein yrbC precursor | chromosome | CDS | 3770749 | 636 | - | 0.52044 |
yrbD | c3953 | Hypothetical protein yrbD precursor | chromosome | CDS | 3771403 | 567 | - | 0.492063 |
yrbE | c3954 | Hypothetical protein yrbE | chromosome | CDS | 3771959 | 783 | - | 0.54917 |
Escherichia coli K12, K-12 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
acpP | b1094 | acyl carrier protein | chromosome | CDS | 1150838 | 237 | + | 0.481013 |
bioC | b0777 | predicted methltransferase, enzyme of biotin synthesis | chromosome | CDS | 810745 | 756 | + | 0.564815 |
caiC | b0037 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 36271 | 1569 | - | 0.509879 |
cchB | b2456 | predicted carboxysome structural protein, ethanolamine utilization protein | chromosome | CDS | 2569785 | 288 | - | 0.53125 |
ccmA | b2201 | heme exporter subunit | chromosome | CDS | 2295043 | 624 | - | 0.559295 |
cueO | b0123 | multicopper oxidase (laccase) | chromosome | CDS | 137083 | 1551 | + | 0.546744 |
dhaR | b1201 | predicted DNA-binding transcriptional regulator, dihydroxyacetone | chromosome | CDS | 1250289 | 1920 | + | 0.514583 |
elbB | b3209 | isoprenoid biosynthesis protein with amidotransferase-like domain | chromosome | CDS | 3347828 | 654 | - | 0.527523 |
entA | b0596 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 627774 | 747 | + | 0.579652 |
entB | b0595 | isochorismatase | chromosome | CDS | 626917 | 858 | + | 0.553613 |
entC | b0593 | isochorismate synthase | chromosome | CDS | 624108 | 1176 | + | 0.564626 |
entD | b0583 | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex | chromosome | CDS | 608682 | 630 | - | 0.474603 |
entE | b0594 | 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex | chromosome | CDS | 625293 | 1611 | + | 0.560521 |
entF | b0586 | enterobactin synthase multienzyme complex component, ATP-dependent | chromosome | CDS | 613380 | 3882 | + | 0.56543 |
fabB | b2323 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2438407 | 1221 | - | 0.56593 |
fabF | b1095 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1151162 | 1242 | + | 0.533011 |
fabG | b1093 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1149893 | 735 | + | 0.515646 |
fadD | b1805 | acyl-CoA synthase | chromosome | CDS | 1886085 | 1686 | - | 0.511862 |
folM | b1606 | short chain dehydrogenase | chromosome | CDS | 1679000 | 723 | + | 0.50899 |
hcaB | b2541 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | chromosome | CDS | 2669247 | 813 | + | 0.560886 |
hcaF | b2539 | 3-phenylpropionate dioxygenase, small (beta) subunit | chromosome | CDS | 2668412 | 519 | + | 0.522158 |
hdhA | b1619 | 7-alpha-hydroxysteroid dehydrogenase | chromosome | CDS | 1695297 | 768 | - | 0.472656 |
idnO | b4266 | gluconate 5-dehydrogenase | chromosome | CDS | 4490610 | 765 | - | 0.494118 |
kduD | b2842 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2980519 | 762 | - | 0.519685 |
macA | b0878 | macrolide transporter subunit, membrane fusion protein (MFP) component | chromosome | CDS | 918458 | 1116 | + | 0.530466 |
mdtA | b2074 | multidrug efflux system, subunit A | chromosome | CDS | 2152040 | 1248 | + | 0.552885 |
menE | b2260 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2371670 | 1356 | - | 0.560472 |
menF | b2265 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2377370 | 1296 | - | 0.533951 |
mhpD | b0350 | 2-keto-4-pentenoate hydratase | chromosome | CDS | 371339 | 810 | + | 0.551852 |
mhpF | b0351 | acetaldehyde dehydrogenase | chromosome | CDS | 372145 | 951 | + | 0.54469 |
nhoA | b1463 | N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 1532048 | 846 | + | 0.514184 |
paaB | b1389 | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation | chromosome | CDS | 1452892 | 288 | + | 0.496528 |
paaI | b1396 | predicted thioesterase | chromosome | CDS | 1458495 | 423 | + | 0.515366 |
pncA | b1768 | nicotinamidase/pyrazinamidase | chromosome | CDS | 1849911 | 642 | + | 0.531153 |
rrmA | b1822 | 23S rRNA m1G745 methyltransferase | chromosome | CDS | 1904275 | 810 | - | 0.51358 |
smtA | b0921 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 972760 | 786 | + | 0.515267 |
srlD | b2705 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 2825759 | 780 | + | 0.533333 |
sufI | b3017 | repressor protein for FtsI | chromosome | CDS | 3159279 | 1413 | - | 0.564048 |
tauD | b0368 | taurine dioxygenase | chromosome | CDS | 387019 | 852 | + | 0.544601 |
tehB | b1430 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 1499586 | 594 | + | 0.459596 |
tynA | b1386 | tyramine oxidase, copper-requiring | chromosome | CDS | 1447100 | 2274 | - | 0.506157 |
ucpA | b2426 | short chain dehydrogenase | chromosome | CDS | 2541854 | 792 | - | 0.55303 |
yafE | b0210 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 231926 | 624 | + | 0.490385 |
yafS | b0213 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 234816 | 723 | + | 0.493776 |
ybbA | b0495 | predicted transporter subunit: ATP-binding component of ABC superfamily | chromosome | CDS | 518957 | 687 | + | 0.56623 |
ybbO | b0493 | short chain dehydrogenase | chromosome | CDS | 517564 | 810 | - | 0.54321 |
ybbP | b0496 | predicted inner membrane protein | chromosome | CDS | 519640 | 2415 | + | 0.575983 |
ybcY | b0562 | DLP12 prophage; predicted SAM-dependent methyltransferase | chromosome | CDS | 581375 | 585 | - | 0.415385 |
ybdB | b0597 | hypothetical protein | chromosome | CDS | 628523 | 414 | + | 0.567633 |
ybhF | b0794 | fused predicted transporter subunits of ABC superfamily: ATP-binding components | chromosome | CDS | 826468 | 1737 | - | 0.555556 |
ycaC | b0897 | predicted hydrolase | chromosome | CDS | 944154 | 627 | - | 0.46252 |
ycdL | b1011 | predicted enzyme | chromosome | CDS | 1071394 | 693 | - | 0.554113 |
ycgM | b1180 | predicted isomerase/hydrolase | chromosome | CDS | 1227302 | 660 | + | 0.519697 |
yciK | b1271 | short chain dehydrogenase | chromosome | CDS | 1326378 | 759 | - | 0.524374 |
ydcO | b1433 | predicted benzoate transporter | chromosome | CDS | 1502929 | 1176 | - | 0.529762 |
ydhJ | b1644 | undecaprenyl pyrophosphate phosphatase | chromosome | CDS | 1719288 | 858 | + | 0.502331 |
ydiD | b1701 | hypothetical protein | chromosome | CDS | 1781001 | 1701 | + | 0.49853 |
ydiI | b1686 | hypothetical protein | chromosome | CDS | 1763246 | 411 | - | 0.515815 |
yecD | b1867 | predicted hydrolase | chromosome | CDS | 1948856 | 567 | + | 0.530864 |
yecO | b1870 | predicted methyltransferase | chromosome | CDS | 1950726 | 744 | + | 0.50672 |
yecP | b1871 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 1951466 | 972 | + | 0.520576 |
yeiN | b2165 | hypothetical protein | chromosome | CDS | 2255451 | 939 | - | 0.497338 |
yfiC | b2575 | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 2710049 | 738 | - | 0.52439 |
ygcW | b2774 | predicted deoxygluconate dehydrogenase | chromosome | CDS | 2897510 | 786 | - | 0.456743 |
ygfF | b2902 | predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 3043180 | 744 | - | 0.549731 |
yghA | b3003 | oxidoreductase | chromosome | CDS | 3147684 | 885 | + | 0.543503 |
yghX | b2999 | predicted hydrolase (pseudogene) | chromosome | CDS | 3144878 | 411 | - | 0.520681 |
yghY | b3000 | predicted dienlactone hydrolase (pseudogene) | chromosome | CDS | 3145288 | 354 | - | 0.525424 |
yhiQ | b3497 | predicted SAM-dependent methyltransferase | chromosome | CDS | 3640403 | 753 | - | 0.581673 |
yigI | b3820 | hypothetical protein | chromosome | CDS | 4002253 | 468 | - | 0.532051 |
yjcS | b4083 | predicted alkyl sulfatase | chromosome | CDS | 4302635 | 1986 | - | 0.529204 |
yjgI | b4249 | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 4471363 | 714 | - | 0.543417 |
yjhP | b4306 | KpLE2 phage-like element; predicted methyltransferase | chromosome | CDS | 4530460 | 747 | - | 0.595716 |
ymfD | b1137 | e14 prophage; predicted SAM-dependent methyltransferase | chromosome | CDS | 1196090 | 666 | - | 0.348348 |
ynbC | b1410 | predicted hydrolase | chromosome | CDS | 1477162 | 1758 | + | 0.509101 |
yohF | b2137 | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 2224531 | 762 | - | 0.551181 |
yojI | b2211 | fused predicted multidrug transport subunits of ABC superfamily: membrane component/ATP-binding component | chromosome | CDS | 2304994 | 1644 | - | 0.534063 |
ypjA | b2647 | adhesin-like autotransporter | chromosome | CDS | 2776168 | 4581 | - | 0.492032 |
yrbC | b3192 | predicted ABC-type organic solvent transporter | chromosome | CDS | 3335278 | 636 | - | 0.523585 |
yrbD | b3193 | predicted ABC-type organic solvent transporter | chromosome | CDS | 3335932 | 552 | - | 0.498188 |
yrbE | b3194 | predicted toluene transporter subunit: membrane component of ABC superfamily | chromosome | CDS | 3336488 | 783 | - | 0.551724 |
ysgA | b3830 | predicted hydrolase | chromosome | CDS | 4013377 | 816 | - | 0.545343 |
Escherichia coli O157:H7 EDL933, EDL933 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Z0894 | hypothetical protein | chromosome | CDS | 852979 | 1389 | - | 0.530598 |
NA | Z5618 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 5111561 | 807 | - | 0.51425 |
NA | Z1925 | unknown protein encoded by prophage CP-933X | chromosome | CDS | 1747627 | 669 | - | 0.406577 |
NA | Z2286 | putative membrane transport protein | chromosome | CDS | 2066573 | 1230 | + | 0.531707 |
NA | Z1547 | putative acyl-carrier protein | chromosome | CDS | 1440959 | 282 | + | 0.407801 |
NA | Z4853 | putative acyl carrier protein | chromosome | CDS | 4402837 | 258 | + | 0.523256 |
NA | Z4353 | putative enzyme | chromosome | CDS | 3954523 | 927 | - | 0.512406 |
NA | Z3392 | putative isomerase-decarboxylase | chromosome | CDS | 3032604 | 702 | - | 0.551282 |
NA | Z4866 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 4413564 | 1230 | + | 0.549594 |
NA | Z4854 | acyl carrier protein | chromosome | CDS | 4403106 | 252 | + | 0.488095 |
NA | Z1918 | putative membrane protein of prophage CP-933X | chromosome | CDS | 1741294 | 2922 | + | 0.545859 |
NA | Z5111 | hypothetical protein | chromosome | CDS | 4668305 | 471 | - | 0.348195 |
NA | Z2317 | hypothetical protein | chromosome | CDS | 2091750 | 1758 | - | 0.513652 |
NA | Z1533 | putative oxidoreductase | chromosome | CDS | 1424754 | 792 | + | 0.421717 |
NA | Z1550 | hypothetical protein | chromosome | CDS | 1445073 | 1224 | + | 0.527778 |
NA | Z0233 | hypothetical protein | chromosome | CDS | 235330 | 771 | + | 0.490272 |
NA | Z3393 | putative 1,2-dioxygenase | chromosome | CDS | 3033320 | 1029 | - | 0.555879 |
NA | Z2714 | hypothetical protein | chromosome | CDS | 2440130 | 411 | - | 0.515815 |
NA | Z1510 | putative synthetase | chromosome | CDS | 1396763 | 735 | - | 0.556463 |
NA | Z3703 | hypothetical protein | chromosome | CDS | 3348165 | 507 | - | 0.573964 |
NA | Z1963 | hypothetical protein | chromosome | CDS | 1782294 | 645 | - | 0.536434 |
NA | Z1942 | putative isomerase | chromosome | CDS | 1760972 | 660 | + | 0.524242 |
NA | Z1549 | putative beta-ketoacyl-[acyl carrier protein] synthase | chromosome | CDS | 1442510 | 2559 | + | 0.535365 |
NA | Z2249 | hypothetical protein | chromosome | CDS | 2034368 | 156 | - | 0.532051 |
NA | Z5352 | putative enzyme | chromosome | CDS | 4880427 | 882 | - | 0.531746 |
NA | Z1545 | putative fatty acyl chain reductase | chromosome | CDS | 1439630 | 756 | + | 0.513228 |
NA | Z2250 | putative N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 2034478 | 735 | - | 0.512925 |
NA | Z4863 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 4411206 | 1170 | + | 0.603419 |
NA | Z4850 | putative O-methyltransferase | chromosome | CDS | 4400223 | 1059 | + | 0.458924 |
acpP | Z1733 | acyl carrier protein | chromosome | CDS | 1595796 | 237 | + | 0.476793 |
bioC | Z0996 | biotin biosynthesis; reaction prior to pimeloyl CoA | chromosome | CDS | 935540 | 756 | + | 0.56746 |
caiC | Z0043 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 40678 | 1569 | - | 0.506055 |
cchA | Z3713 | detox protein | chromosome | CDS | 3358187 | 336 | - | 0.574405 |
cchB | Z3712 | detox protein | chromosome | CDS | 3357793 | 288 | - | 0.534722 |
entA | Z0738 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 709803 | 747 | + | 0.576975 |
entB | Z0737 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase | chromosome | CDS | 708946 | 858 | + | 0.552448 |
entC | Z0735 | isochorismate synthase | chromosome | CDS | 706137 | 1176 | + | 0.562925 |
entD | Z0723 | enterobactin synthetase component D | chromosome | CDS | 690897 | 630 | - | 0.487302 |
entE | Z0736 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 707322 | 1611 | + | 0.556176 |
entF | Z0727 | ATP-dependent serine activating enzyme (may be part of enterobactin synthase as component F) | chromosome | CDS | 695595 | 3882 | + | 0.561824 |
fabB | Z3586 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 3236704 | 1221 | - | 0.560197 |
fabF | Z1734 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1596120 | 1242 | + | 0.531401 |
fabG | Z4865 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 4412836 | 732 | + | 0.565574 |
fabG | Z1732 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1594851 | 735 | + | 0.512925 |
fadD | Z2848 | acyl-CoA synthase | chromosome | CDS | 2565094 | 1686 | - | 0.515421 |
hcaA2 | Z3810 | small terminal subunit of phenylpropionate dioxygenase | chromosome | CDS | 3460729 | 519 | + | 0.526012 |
hcaB | Z3813 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | chromosome | CDS | 3461564 | 813 | + | 0.558426 |
hdhA | Z2624 | 7-alpha-hydroxysteroid dehydrogenase | chromosome | CDS | 2372189 | 768 | - | 0.472656 |
kduD | Z4162 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3772197 | 762 | - | 0.519685 |
menE | Z3520 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 3174117 | 1356 | - | 0.561209 |
menF | Z3525 | menaquinone-specific isochorismate synthase | chromosome | CDS | 3179817 | 1071 | - | 0.537815 |
mhpD | Z0448 | 2-keto-4-pentenoate hydratase | chromosome | CDS | 430717 | 810 | + | 0.555556 |
mhpF | Z0450 | acetaldehyde dehydrogenase | chromosome | CDS | 431523 | 951 | + | 0.546793 |
smtA | Z1268 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 1192402 | 786 | + | 0.515267 |
srlD | Z4012 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 3618956 | 780 | + | 0.523077 |
sufI | Z4371 | suppressor of ftsI | chromosome | CDS | 3968922 | 1413 | - | 0.564048 |
tauD | Z0467 | taurine dioxygenase, 2-oxoglutarate-dependent | chromosome | CDS | 448799 | 852 | + | 0.542253 |
tehB | Z2288 | tellurite resistance | chromosome | CDS | 2068811 | 594 | - | 0.461279 |
ucpA | Z3691 | short chain dehydrogenase | chromosome | CDS | 3336951 | 858 | - | 0.534965 |
yacK | Z0133 | hypothetical protein | chromosome | CDS | 141456 | 1551 | + | 0.541586 |
yafS | Z0237 | hypothetical protein | chromosome | CDS | 238349 | 741 | + | 0.492578 |
ybbA | Z0648 | putative ATP-binding component of a transport system | chromosome | CDS | 613224 | 687 | + | 0.569141 |
ybbO | Z0646 | short chain dehydrogenase | chromosome | CDS | 611831 | 810 | - | 0.546914 |
ybbP | Z0649 | putative oxidoreductase | chromosome | CDS | 613907 | 2415 | + | 0.578468 |
ybdB | Z0739 | hypothetical protein | chromosome | CDS | 710552 | 414 | + | 0.582126 |
ycaC | Z1243 | hypothetical protein | chromosome | CDS | 1165267 | 627 | - | 0.45933 |
yciK | Z2539 | short chain dehydrogenase | chromosome | CDS | 2257357 | 759 | + | 0.517787 |
ydgB | Z2606 | short chain dehydrogenase | chromosome | CDS | 2356063 | 723 | + | 0.507607 |
ydiD | Z2730 | hypothetical protein | chromosome | CDS | 2457892 | 1701 | + | 0.499118 |
ydjB | Z2802 | hypothetical protein | chromosome | CDS | 2527375 | 660 | + | 0.528788 |
yebH | Z2866 | putative enzyme | chromosome | CDS | 2583287 | 810 | - | 0.509877 |
yecD | Z2920 | hypothetical protein | chromosome | CDS | 2627937 | 600 | + | 0.52 |
yecO | Z2923 | hypothetical protein | chromosome | CDS | 2629840 | 744 | + | 0.50672 |
yecP | Z2924 | putative enzyme | chromosome | CDS | 2630580 | 972 | + | 0.516461 |
yeiN | Z3422 | hypothetical protein | chromosome | CDS | 3063625 | 939 | - | 0.490948 |
ygcW | Z4085 | putative oxidoreductase | chromosome | CDS | 3686903 | 861 | - | 0.457607 |
yghA | Z4356 | oxidoreductase | chromosome | CDS | 3957332 | 885 | + | 0.542373 |
yhbL | Z4573 | sigma cross-reacting protein 27A (SCRP-27A) | chromosome | CDS | 4159375 | 663 | - | 0.523379 |
yhiQ | Z4897 | hypothetical protein | chromosome | CDS | 4443917 | 753 | - | 0.589641 |
yigI | Z5341 | hypothetical protein | chromosome | CDS | 4869304 | 486 | - | 0.522634 |
yjcS | Z5683 | hypothetical protein | chromosome | CDS | 5187282 | 1998 | - | 0.523524 |
yjgI | Z5861 | oxidoreductase | chromosome | CDS | 5358863 | 714 | - | 0.540616 |
yohF | Z3386 | oxidoreductase | chromosome | CDS | 3026689 | 762 | - | 0.543307 |
yojI | Z3469 | putative ATP-binding component of a transport system | chromosome | CDS | 3111228 | 1644 | - | 0.532847 |
yrbC | Z4555 | hypothetical protein | chromosome | CDS | 4146825 | 636 | - | 0.523585 |
yrbD | Z4556 | hypothetical protein | chromosome | CDS | 4147479 | 552 | - | 0.498188 |
yrbE | Z4557 | hypothetical protein | chromosome | CDS | 4148035 | 783 | - | 0.551724 |
Escherichia coli O157:H7 str. Sakai, Sakai | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ECs4328 | putative acyl carrier protein | chromosome | CDS | 4335616 | 258 | + | 0.523256 |
NA | ECs1656 | hypothetical protein | chromosome | CDS | 1655842 | 432 | - | 0.412037 |
NA | ECs3405 | phenylpropionate dioxygenase small terminal subunit | chromosome | CDS | 3390891 | 519 | + | 0.526012 |
NA | ECs0982 | hypothetical protein | chromosome | CDS | 1076044 | 627 | - | 0.460925 |
NA | ECs4329 | acyl carrier protein | chromosome | CDS | 4335885 | 252 | + | 0.492063 |
NA | ECs4325 | putative O-methyltransferase | chromosome | CDS | 4332999 | 1062 | + | 0.45951 |
NA | ECs1004 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 1103179 | 786 | + | 0.516539 |
NA | ECs3630 | putative oxidoreductase | chromosome | CDS | 3619605 | 786 | - | 0.46056 |
NA | ECs3319 | detox protein | chromosome | CDS | 3288353 | 336 | - | 0.574405 |
NA | ECs2514 | acyl-CoA synthase | chromosome | CDS | 2489890 | 1686 | - | 0.516014 |
NA | ECs3884 | hypothetical protein | chromosome | CDS | 3887210 | 888 | - | 0.516892 |
NA | ECs0633 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 707540 | 1611 | + | 0.557418 |
NA | ECs0855 | BioC | chromosome | CDS | 933888 | 756 | + | 0.56746 |
NA | ECs0556 | short chain dehydrogenase | chromosome | CDS | 612137 | 810 | - | 0.546914 |
NA | ECs2408 | hypothetical protein | chromosome | CDS | 2382745 | 1647 | + | 0.497268 |
NA | ECs4338 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 4343985 | 1170 | + | 0.603419 |
NA | ECs4369 | hypothetical protein | chromosome | CDS | 4376692 | 753 | - | 0.589641 |
NA | ECs1843 | short chain dehydrogenase | chromosome | CDS | 1829061 | 759 | - | 0.517787 |
NA | ECs3148 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 3104161 | 1356 | - | 0.561209 |
NA | ECs4341 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 4346343 | 1230 | + | 0.550407 |
NA | ECs3407 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | chromosome | CDS | 3391726 | 813 | + | 0.558426 |
NA | ECs3309 | hypothetical protein | chromosome | CDS | 3278331 | 501 | - | 0.57485 |
NA | ECs1257 | putative synthetase | chromosome | CDS | 1312991 | 696 | - | 0.548851 |
NA | ECs2581 | hypothetical protein | chromosome | CDS | 2555372 | 972 | + | 0.516461 |
NA | ECs1473 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1511034 | 1242 | + | 0.531401 |
NA | ECs2577 | hypothetical protein | chromosome | CDS | 2552729 | 600 | + | 0.52 |
NA | ECs5003 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 5081575 | 807 | - | 0.515489 |
NA | ECs3100 | putative ATP-binding component of a transport system | chromosome | CDS | 3039959 | 1644 | - | 0.532847 |
NA | ECs2312 | short chain dehydrogenase | chromosome | CDS | 2280777 | 723 | + | 0.507607 |
NA | ECs0209 | hypothetical protein | chromosome | CDS | 238348 | 741 | + | 0.492578 |
NA | ECs4088 | sigma cross-reacting protein 27A | chromosome | CDS | 4092159 | 654 | - | 0.527523 |
NA | ECs3030 | putative gentisate 1,2-dioxygenase | chromosome | CDS | 2962054 | 1029 | - | 0.555879 |
NA | ECs3887 | oxidoreductase | chromosome | CDS | 3890019 | 885 | + | 0.542373 |
NA | ECs4760 | hypothetical protein | chromosome | CDS | 4811663 | 882 | - | 0.531746 |
NA | ECs1285 | putative 3-oxoacyl-(acyl carrier protein) reductase | chromosome | CDS | 1356044 | 570 | + | 0.545614 |
NA | ECs0632 | isochorismate synthase | chromosome | CDS | 706355 | 1176 | + | 0.562925 |
NA | ECs3029 | putative isomerase | chromosome | CDS | 2961338 | 702 | - | 0.551282 |
NA | ECs3207 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 3166748 | 1221 | - | 0.562654 |
NA | ECs0127 | hypothetical protein | chromosome | CDS | 141455 | 1551 | + | 0.541586 |
NA | ECs4072 | hypothetical protein | chromosome | CDS | 4080263 | 552 | - | 0.498188 |
NA | ECs3024 | oxidoreductase | chromosome | CDS | 2955422 | 762 | - | 0.545932 |
NA | ECs2035 | TehB | chromosome | CDS | 2019071 | 594 | + | 0.461279 |
NA | ECs0635 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 710021 | 747 | + | 0.576975 |
NA | ECs2012 | hypothetical protein | chromosome | CDS | 1994971 | 1758 | + | 0.513652 |
NA | ECs0622 | enterochelin synthetase, component D | chromosome | CDS | 691115 | 630 | - | 0.487302 |
NA | ECs0559 | putative oxidoreductase | chromosome | CDS | 614213 | 2415 | + | 0.578468 |
NA | ECs1675 | putative isomerase | chromosome | CDS | 1669565 | 660 | + | 0.524242 |
NA | ECs0763 | putative glutamate mutase L | chromosome | CDS | 851325 | 1389 | - | 0.530598 |
NA | ECs2066 | hypothetical protein | chromosome | CDS | 2053261 | 735 | + | 0.512925 |
NA | ECs3057 | hypothetical protein | chromosome | CDS | 2992357 | 939 | - | 0.490948 |
NA | ECs4560 | CesT | chromosome | CDS | 4599322 | 471 | - | 0.348195 |
NA | ECs0557 | putative ATP-binding component of a transport system | chromosome | CDS | 613530 | 687 | + | 0.569141 |
NA | ECs2327 | 7-alpha-hydroxysteroid dehydrogenase | chromosome | CDS | 2296902 | 768 | - | 0.472656 |
NA | ECs4071 | hypothetical protein | chromosome | CDS | 4079609 | 636 | - | 0.523585 |
NA | ECs1289 | putative 3-oxoacyl-[acyl-carrier-protein] synthase synthase | chromosome | CDS | 1358738 | 2559 | + | 0.535365 |
NA | ECs3318 | detox protein | chromosome | CDS | 3287959 | 288 | - | 0.534722 |
NA | ECs2532 | hypothetical protein | chromosome | CDS | 2508081 | 810 | - | 0.509877 |
NA | ECs2580 | hypothetical protein | chromosome | CDS | 2554632 | 744 | + | 0.50672 |
NA | ECs3901 | suppressor of ftsI | chromosome | CDS | 3901608 | 1413 | - | 0.564048 |
NA | ECs2038 | hypothetical protein | chromosome | CDS | 2020671 | 1173 | - | 0.532822 |
NA | ECs2393 | hypothetical protein | chromosome | CDS | 2364934 | 411 | - | 0.515815 |
NA | ECs3561 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 3551659 | 780 | + | 0.523077 |
NA | ECs0405 | 2-keto-4-pentenoate hydratase | chromosome | CDS | 430715 | 810 | + | 0.555556 |
NA | ECs5226 | oxidoreductase | chromosome | CDS | 5328878 | 714 | - | 0.540616 |
NA | ECs3153 | menaquinone-specific isochorismate synthase | chromosome | CDS | 3109861 | 1296 | - | 0.536265 |
NA | ECs4750 | hypothetical protein | chromosome | CDS | 4800540 | 468 | - | 0.532051 |
NA | ECs1290 | hypothetical protein | chromosome | CDS | 1361544 | 981 | + | 0.530071 |
NA | ECs1696 | hypothetical protein | chromosome | CDS | 1690888 | 645 | - | 0.536434 |
NA | ECs0406 | acetaldehyde dehydrogenase | chromosome | CDS | 431521 | 951 | + | 0.546793 |
NA | ECs1287 | putative acyl carrier protein | chromosome | CDS | 1357196 | 273 | + | 0.406593 |
NA | ECs0206 | putative biotin synthesis protein | chromosome | CDS | 235329 | 771 | + | 0.490272 |
NA | ECs0040 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 40677 | 1569 | - | 0.506055 |
NA | ECs3699 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3704898 | 762 | - | 0.52231 |
NA | ECs0625 | EntF | chromosome | CDS | 695813 | 3882 | + | 0.562339 |
NA | ECs2475 | hypothetical protein | chromosome | CDS | 2452172 | 660 | + | 0.528788 |
NA | ECs3297 | short chain dehydrogenase | chromosome | CDS | 3267117 | 792 | - | 0.549242 |
NA | ECs0422 | taurine dioxygenase | chromosome | CDS | 448797 | 852 | + | 0.542253 |
NA | ECs5066 | hypothetical protein | chromosome | CDS | 5157297 | 1998 | - | 0.524024 |
NA | ECs1472 | acyl carrier protein | chromosome | CDS | 1510710 | 237 | + | 0.476793 |
NA | ECs1650 | putative tail fiber protein | chromosome | CDS | 1649515 | 2916 | + | 0.546639 |
NA | ECs1275 | putative oxidoreductase | chromosome | CDS | 1340991 | 783 | + | 0.422733 |
NA | ECs0634 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase | chromosome | CDS | 709164 | 858 | + | 0.552448 |
NA | ECs4073 | hypothetical protein | chromosome | CDS | 4080819 | 783 | - | 0.551724 |
NA | ECs0636 | hypothetical protein | chromosome | CDS | 710770 | 414 | + | 0.582126 |
fabG | ECs1471 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1509765 | 735 | + | 0.512925 |
fabG | ECs4340 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 4345615 | 732 | + | 0.565574 |
Escherichia coli UTI89, UTI89 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | UTI89_C0565 | hypothetical protein YbcY precursor | chromosome | CDS | 570159 | 666 | - | 0.40991 |
NA | UTI89_C1385 | hypothetical protein | chromosome | CDS | 1320413 | 813 | - | 0.549815 |
NA | UTI89_C1394 | glycerol metabolism operon regulatory protein | chromosome | CDS | 1329706 | 1929 | + | 0.514256 |
NA | UTI89_C1522 | unknown protein encoded by prophage CP-933X | chromosome | CDS | 1433896 | 666 | - | 0.411411 |
NA | UTI89_C2213 | putative peptide synthetase | chromosome | CDS | 2128312 | 6465 | - | 0.563496 |
NA | UTI89_C2221 | putative polyketide synthase | chromosome | CDS | 2152813 | 2610 | - | 0.550192 |
NA | UTI89_C0574 | putative resistance protein | chromosome | CDS | 582933 | 1224 | + | 0.558007 |
NA | UTI89_C4813 | putative oxoacyl reductase | chromosome | CDS | 4707991 | 792 | - | 0.530303 |
NA | UTI89_C2215 | putative polyketide synthase | chromosome | CDS | 2141331 | 3033 | - | 0.569073 |
NA | UTI89_C1564 | acriflavine resistance protein B | chromosome | CDS | 1474282 | 3108 | + | 0.520914 |
NA | UTI89_C2210 | putative peptide synthetase | chromosome | CDS | 2120991 | 4455 | - | 0.539169 |
NA | UTI89_C2219 | hypothetical protein | chromosome | CDS | 2151656 | 249 | - | 0.39759 |
NA | UTI89_C4409 | hypothetical protein | chromosome | CDS | 4295309 | 600 | - | 0.506667 |
NA | UTI89_C2207 | putative thioesterase | chromosome | CDS | 2116259 | 723 | - | 0.460581 |
NA | UTI89_C3399 | acyl carrier protein, putative | chromosome | CDS | 3336843 | 249 | + | 0.409639 |
NA | UTI89_C4410 | putative carboxymethylenebutenolidase | chromosome | CDS | 4296234 | 876 | - | 0.527397 |
NA | UTI89_C3421 | putative enzyme | chromosome | CDS | 3357679 | 927 | - | 0.523193 |
NA | UTI89_C2214 | putative peptide synthetase | chromosome | CDS | 2134787 | 6501 | - | 0.561144 |
NA | UTI89_C2222 | putative peptide/polyketide synthase | chromosome | CDS | 2155454 | 9630 | - | 0.533333 |
NA | UTI89_C2216 | hypothetical protein | chromosome | CDS | 2144413 | 4812 | - | 0.553616 |
NA | UTI89_C1609 | putative secretion protein | chromosome | CDS | 1520401 | 1029 | + | 0.462585 |
NA | UTI89_C2209 | putative polyketide synthase | chromosome | CDS | 2118501 | 2460 | - | 0.521138 |
NA | UTI89_C3245 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3172935 | 762 | - | 0.519685 |
NA | UTI89_C2180 | putative ABC transporter protein | chromosome | CDS | 2074098 | 1830 | - | 0.583607 |
NA | UTI89_C2411 | putative oxidoreductase | chromosome | CDS | 2367700 | 762 | - | 0.551181 |
acpP | UTI89_C1220 | acyl carrier protein | chromosome | CDS | 1196579 | 237 | + | 0.481013 |
acrD | UTI89_C2796 | probable aminoglycoside efflux pump | chromosome | CDS | 2737221 | 3114 | + | 0.545279 |
acrF | UTI89_C3708 | acriflavine resistance protein F | chromosome | CDS | 3632991 | 3105 | + | 0.510145 |
bioC | UTI89_C0775 | biotin synthesis protein BioC | chromosome | CDS | 774580 | 795 | + | 0.56478 |
caiC | UTI89_C0043 | probable crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 38906 | 1569 | - | 0.508604 |
ccmA | UTI89_C2479 | heme exporter protein A | chromosome | CDS | 2433901 | 624 | - | 0.554487 |
cydC | UTI89_C0901 | transport ATP-binding protein CydC | chromosome | CDS | 897856 | 1722 | - | 0.534843 |
cydD | UTI89_C0902 | transport ATP-binding protein CydD | chromosome | CDS | 899578 | 1767 | - | 0.532541 |
emrK | UTI89_C2700 | multidrug resistance protein K | chromosome | CDS | 2643444 | 1164 | - | 0.414948 |
entA | UTI89_C0598 | 2,3-dihydro-2,3-dihydroxybenzoate | chromosome | CDS | 612472 | 747 | + | 0.57162 |
entB | UTI89_C0597 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase | chromosome | CDS | 611615 | 858 | + | 0.548951 |
entC | UTI89_C0595 | isochorismate synthase | chromosome | CDS | 608794 | 1188 | + | 0.557239 |
entD | UTI89_C0583 | 4'-phosphopantetheinyl transferase EntD | chromosome | CDS | 593566 | 771 | - | 0.485084 |
entE | UTI89_C0596 | enterobactin synthetase component E | chromosome | CDS | 609991 | 1611 | + | 0.564867 |
entF | UTI89_C0588 | enterobactin synthetase component F | chromosome | CDS | 598264 | 3882 | + | 0.563112 |
eutK | UTI89_C2771 | ethanolamine utilization protein EutK | chromosome | CDS | 2711662 | 507 | - | 0.579882 |
eutM | UTI89_C2781 | detox protein | chromosome | CDS | 2721801 | 336 | - | 0.568452 |
eutN | UTI89_C2780 | detox protein | chromosome | CDS | 2721407 | 288 | - | 0.538194 |
fabB | UTI89_C2608 | bifunctional beta-ketoacyl-ACP synthase I/malonyl-ACP decarboxylase | chromosome | CDS | 2572798 | 1221 | - | 0.561016 |
fabF | UTI89_C1221 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1196902 | 1242 | + | 0.533011 |
fabG | UTI89_C1218 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1195634 | 735 | + | 0.515646 |
fadD | UTI89_C1999 | long chain fatty acid CoA-ligase | chromosome | CDS | 1914750 | 1752 | - | 0.509132 |
hdhA | UTI89_C1807 | 7-alpha-hydroxysteroid dehydrogenase | chromosome | CDS | 1737529 | 768 | - | 0.471354 |
hlyA | UTI89_C4926 | hemolysin A | chromosome | CDS | 4825022 | 3075 | - | 0.405528 |
hlyB | UTI89_C4925 | hemolysin secretion protein HlyB | chromosome | CDS | 4822828 | 2124 | - | 0.403955 |
hlyD | UTI89_C4924 | hemolysin D | chromosome | CDS | 4821373 | 1437 | - | 0.395268 |
ibgR | UTI89_C5033 | putative regulatory protein IbgR | chromosome | CDS | 4934895 | 1950 | + | 0.395897 |
idnO | UTI89_C4873 | 5-keto-D-gluconate 5-reductase | chromosome | CDS | 4774294 | 765 | - | 0.494118 |
iroC | UTI89_C1121 | IroC protein | chromosome | CDS | 1112788 | 3786 | - | 0.576334 |
irp1 | UTI89_C2184 | HMWP1 nonribosomal peptide/polyketide synthase | chromosome | CDS | 2085201 | 9492 | + | 0.605984 |
irp2 | UTI89_C2183 | putative peptide synthetase-like protein | chromosome | CDS | 2078988 | 6126 | + | 0.600555 |
macA | UTI89_C0883 | macrolide-specific efflux protein MacA precursor | chromosome | CDS | 879993 | 1143 | + | 0.527559 |
mdlB | UTI89_C0477 | multidrug resistance-like ATP-binding protein mdlB | chromosome | CDS | 484652 | 1896 | + | 0.560127 |
menE | UTI89_C2543 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2509668 | 1356 | - | 0.565634 |
menF | UTI89_C2549 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2515368 | 1296 | - | 0.532407 |
nhoA | UTI89_C1681 | N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 1602737 | 846 | + | 0.503546 |
phnM | UTI89_C4690 | PhnM protein | chromosome | CDS | 4590328 | 1137 | - | 0.597186 |
repB | UTI89_P002 | replication protein RepB-like protein | pUTI89 | CDS | 831 | 261 | + | 0.402299 |
smtA | UTI89_C0993 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 978030 | 798 | + | 0.515038 |
srlD | UTI89_C3067 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 2986130 | 780 | + | 0.532051 |
sufI | UTI89_C3443 | FtsI suppressor | chromosome | CDS | 3379534 | 1413 | - | 0.558386 |
tam | UTI89_C1738 | putative trans-aconitate 2-methyltransferase | chromosome | CDS | 1664576 | 759 | + | 0.546772 |
tauD | UTI89_C0387 | alpha-ketoglutarate-dependent taurine dioxygenase | chromosome | CDS | 403279 | 852 | + | 0.545775 |
tehB | UTI89_C1650 | tellurite resistance protein TehB | chromosome | CDS | 1574832 | 594 | + | 0.468013 |
ucpA | UTI89_C2759 | oxidoreductase UcpA | chromosome | CDS | 2702507 | 858 | - | 0.536131 |
yafE | UTI89_C0229 | conserved hypothetical protein YafE | chromosome | CDS | 236748 | 771 | + | 0.491569 |
yafS | UTI89_C0232 | hypothetical protein YafS | chromosome | CDS | 239766 | 741 | + | 0.497976 |
ybbO | UTI89_C0528 | putative oxidoreductase | chromosome | CDS | 536324 | 810 | - | 0.537037 |
ybdB | UTI89_C0599 | hypothetical protein | chromosome | CDS | 613221 | 414 | + | 0.584541 |
ybhG | UTI89_C0796 | hypothetical membrane protein YbhG | chromosome | CDS | 791918 | 999 | - | 0.576577 |
ybtE | UTI89_C2187 | yersiniabactin siderophore biosynthetic protein | chromosome | CDS | 2096593 | 1578 | + | 0.586185 |
ybtP | UTI89_C2181 | putative inner membrane ABC-transporter | chromosome | CDS | 2075887 | 1803 | - | 0.571825 |
ybtT | UTI89_C2186 | YbtT protein | chromosome | CDS | 2095801 | 789 | + | 0.588086 |
ycaC | UTI89_C0970 | protein YcaC | chromosome | CDS | 952661 | 726 | - | 0.464187 |
ycdL | UTI89_C1074 | hypothetical isochorismatase family protein ycdL | chromosome | CDS | 1059103 | 735 | - | 0.563265 |
ycgM | UTI89_C1366 | putative isomerase | chromosome | CDS | 1301528 | 660 | + | 0.525758 |
yciK | UTI89_C1539 | hypothetical oxidoreductase YciK | chromosome | CDS | 1449301 | 759 | - | 0.523057 |
ydcO | UTI89_C1652 | hypothetical protein YdcO | chromosome | CDS | 1576431 | 1296 | - | 0.525463 |
ydgB | UTI89_C1794 | hypothetical oxidoreductase YdgB | chromosome | CDS | 1721406 | 723 | + | 0.50899 |
ydhJ | UTI89_C1835 | hypothetical protein YdhJ | chromosome | CDS | 1761383 | 900 | + | 0.507778 |
ydiD | UTI89_C1894 | hypothetical protein YdiD | chromosome | CDS | 1818564 | 1701 | + | 0.500882 |
ydiI | UTI89_C1878 | hypothetical protein YdiI | chromosome | CDS | 1800982 | 411 | - | 0.506083 |
ydjB | UTI89_C1964 | pyrazinamidase/nicotinamidase | chromosome | CDS | 1884116 | 660 | + | 0.527273 |
yebH | UTI89_C2020 | ribosomal RNA large subunit methyltransferase A | chromosome | CDS | 1932940 | 810 | - | 0.511111 |
yecD | UTI89_C2071 | hypothetical protein | chromosome | CDS | 1977451 | 582 | + | 0.534364 |
yecO | UTI89_C2074 | hypothetical protein | chromosome | CDS | 1979336 | 744 | + | 0.5 |
yecP | UTI89_C2075 | hypothetical protein | chromosome | CDS | 1980076 | 972 | + | 0.526749 |
yeeO | UTI89_C2199 | hypothetical protein YeeO | chromosome | CDS | 2109870 | 1638 | - | 0.484737 |
yegM | UTI89_C2349 | hypothetical protein YegM precursor | chromosome | CDS | 2291249 | 1395 | + | 0.534767 |
yegO | UTI89_C2351 | hypothetical protein YegO | chromosome | CDS | 2295766 | 3078 | + | 0.562703 |
yeiN | UTI89_C2439 | hypothetical protein | chromosome | CDS | 2397445 | 939 | - | 0.467519 |
ygcW | UTI89_C3137 | hypothetical oxidoreductase YgcW | chromosome | CDS | 3052252 | 861 | - | 0.458769 |
yghA | UTI89_C3424 | hypothetical oxidoreductase YghA | chromosome | CDS | 3360485 | 888 | + | 0.539414 |
yhiH | UTI89_C4007 | hypothetical ABC transporter ATP-binding protein yhiH | chromosome | CDS | 3892511 | 2736 | - | 0.563596 |
yhiI | UTI89_C4008 | hypothetical protein | chromosome | CDS | 3895243 | 1068 | - | 0.582397 |
yhiQ | UTI89_C4016 | hypothetical protein YhiQ | chromosome | CDS | 3904173 | 816 | - | 0.593137 |
yhiV | UTI89_C4046 | hypothetical protein YhiV | chromosome | CDS | 3927193 | 3114 | + | 0.530186 |
yigI | UTI89_C4383 | hypothetical protein YigI | chromosome | CDS | 4269233 | 486 | - | 0.520576 |
yjcS | UTI89_C4679 | hypothetical protein YjcS | chromosome | CDS | 4578974 | 1998 | - | 0.524525 |
yojI | UTI89_C2491 | hypothetical ABC transporter ATP-binding protein yojI | chromosome | CDS | 2443287 | 1644 | - | 0.526156 |
yrbE | UTI89_C3630 | hypothetical protein | chromosome | CDS | 3558144 | 783 | - | 0.550447 |
Escherichia coli W3110, K-12 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
acpP | acyl carrier protein | chromosome | CDS | 1153192 | 237 | + | 0.481013 | |
bioC | predicted methltransferase, enzyme of biotin synthesis | chromosome | CDS | 811944 | 756 | + | 0.564815 | |
caiC | predicted crotonobetaine CoA ligase:carnitine CoA ligase | chromosome | CDS | 36271 | 1569 | - | 0.509879 | |
cchB | predicted carboxysome structural protein, ethanolamine utilization protein | chromosome | CDS | 2570419 | 288 | - | 0.53125 | |
ccmA | heme exporter subunit | chromosome | CDS | 2300355 | 624 | - | 0.559295 | |
cueO | multicopper oxidase (laccase) | chromosome | CDS | 137083 | 1551 | + | 0.546744 | |
dhaR | predicted DNA-binding transcriptional regulator, dihydroxyacetone | chromosome | CDS | 1252643 | 1920 | + | 0.514583 | |
elbB | isoprenoid biosynthesis protein with amidotransferase-like domain | chromosome | CDS | 3349661 | 654 | - | 0.527523 | |
entA | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | chromosome | CDS | 627774 | 747 | + | 0.579652 | |
entB | isochorismatase | chromosome | CDS | 626917 | 858 | + | 0.553613 | |
entC | isochorismate synthase 1 | chromosome | CDS | 624108 | 1176 | + | 0.564626 | |
entD | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex | chromosome | CDS | 608682 | 630 | - | 0.474603 | |
entE | 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex | chromosome | CDS | 625293 | 1611 | + | 0.560521 | |
entF | enterobactin synthase multienzyme complex component, ATP-dependent | chromosome | CDS | 613380 | 3882 | + | 0.56543 | |
fabB | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 2445831 | 1221 | - | 0.56593 | |
fabF | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1153516 | 1242 | + | 0.533011 | |
fabG | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1152247 | 735 | + | 0.515646 | |
fadD | acyl-CoA synthetase | chromosome | CDS | 1889775 | 1686 | - | 0.511862 | |
folM | dihydrofolate reductase isozyme | chromosome | CDS | 1682690 | 723 | + | 0.50899 | |
hcaB | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | chromosome | CDS | 2669881 | 813 | + | 0.560886 | |
hcaF | 3-phenylpropionate dioxygenase, small (beta) subunit | chromosome | CDS | 2669046 | 519 | + | 0.522158 | |
hdhA | 7alpha-hydroxysteroid dehydrogenase, NAD-dependent | chromosome | CDS | 1698987 | 768 | - | 0.472656 | |
idnO | 5-keto-D-gluconate-5-reductase | chromosome | CDS | 4497267 | 765 | - | 0.494118 | |
kduD | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2981153 | 762 | - | 0.519685 | |
macA | macrolide transporter subunit, membrane fusion protein (MFP) component | chromosome | CDS | 919657 | 1116 | + | 0.530466 | |
mdtA | multidrug efflux system, subunit A | chromosome | CDS | 2156153 | 1248 | + | 0.552885 | |
menE | o-succinylbenzoate-CoA ligase | chromosome | CDS | 2378318 | 1356 | - | 0.560472 | |
menF | isochorismate synthase 2 | chromosome | CDS | 2384018 | 1296 | - | 0.533951 | |
mhpD | 2-keto-4-pentenoate hydratase | chromosome | CDS | 371339 | 810 | + | 0.551852 | |
mhpF | acetaldehyde-CoA dehydrogenase II, NAD-binding | chromosome | CDS | 372145 | 951 | + | 0.54469 | |
nhoA | N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 1535738 | 846 | + | 0.514184 | |
paaB | predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation | chromosome | CDS | 1456582 | 288 | + | 0.496528 | |
paaI | predicted thioesterase | chromosome | CDS | 1462185 | 423 | + | 0.515366 | |
pncA | nicotinamidase/pyrazinamidase | chromosome | CDS | 1853601 | 642 | + | 0.531153 | |
rrmA | 23S rRNA m1G745 methyltransferase | chromosome | CDS | 1907965 | 810 | - | 0.51358 | |
smtA | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 973959 | 786 | + | 0.515267 | |
srlD | sorbitol-6-phosphate dehydrogenase | chromosome | CDS | 2826393 | 780 | + | 0.533333 | |
sufI | repressor protein for FtsI | chromosome | CDS | 3159913 | 1413 | - | 0.564048 | |
tauD | taurine dioxygenase, 2-oxoglutarate-dependent | chromosome | CDS | 387019 | 852 | + | 0.544601 | |
tehB | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 1503276 | 594 | + | 0.459596 | |
tynA | tyramine oxidase, copper-requiring | chromosome | CDS | 1450790 | 2274 | - | 0.506157 | |
ucpA | predicted oxidoredutase, sulfate metabolism protein | chromosome | CDS | 2549278 | 792 | - | 0.55303 | |
yafE | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 231926 | 624 | + | 0.490385 | |
yafS | predicted S-adenosyl-L-methionine-dependent methyltransferase | chromosome | CDS | 234816 | 723 | + | 0.493776 | |
ybbA | predicted transporter subunit | chromosome | CDS | 518957 | 687 | + | 0.56623 | |
ybbO | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 517564 | 810 | - | 0.54321 | |
ybbP | predicted inner membrane protein | chromosome | CDS | 519640 | 2415 | + | 0.575983 | |
ybcY | predicted SAM-dependent methyltransferase | chromosome | CDS | 581375 | 585 | - | 0.415385 | |
ybdB | hypothetical protein | chromosome | CDS | 628523 | 414 | + | 0.567633 | |
ybhF | fused predicted transporter subunits and ATP-binding components of ABC superfamily | chromosome | CDS | 827667 | 1737 | - | 0.555556 | |
ycaC | predicted hydrolase | chromosome | CDS | 945353 | 627 | - | 0.46252 | |
ycdL | hypothetical protein | chromosome | CDS | 1072593 | 693 | - | 0.554113 | |
ycgM | predicted isomerase/hydrolase | chromosome | CDS | 1229656 | 660 | + | 0.519697 | |
yciK | predicted oxoacyl-(acyl carrier protein) reductase, EmrKY-TolC system | chromosome | CDS | 1330068 | 759 | - | 0.524374 | |
ydcO | predicted benzoate transporter | chromosome | CDS | 1506619 | 1176 | - | 0.529762 | |
ydhJ | undecaprenyl pyrophosphate phosphatase | chromosome | CDS | 1722978 | 858 | + | 0.502331 | |
ydiD | short chain acyl-CoA synthetase, anaerobic | chromosome | CDS | 1784691 | 1701 | + | 0.49853 | |
ydiI | hypothetical protein | chromosome | CDS | 1766936 | 411 | - | 0.515815 | |
yecD | predicted hydrolase | chromosome | CDS | 1952546 | 567 | + | 0.530864 | |
yecO | predicted methyltransferase | chromosome | CDS | 1954416 | 744 | + | 0.50672 | |
yecP | predicted methyltransferase | chromosome | CDS | 1955156 | 972 | + | 0.520576 | |
yeiN | hypothetical protein | chromosome | CDS | 2260763 | 939 | - | 0.497338 | |
yfiC | predicted methyltransferase | chromosome | CDS | 2710683 | 738 | - | 0.52439 | |
ygcW | predicted deoxygluconate dehydrogenase | chromosome | CDS | 2898144 | 786 | - | 0.456743 | |
ygfF | predicted NAD(P)-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 3043814 | 744 | - | 0.549731 | |
yghA | predicted glutathionylspermidine synthase, with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 3148318 | 885 | + | 0.543503 | |
yghX | chromosome | pseudo | 3145512 | 411 | - | 0.520681 | ||
yghX | chromosome | pseudo | 3145512 | 411 | - | 0.520681 | ||
yhiQ | predicted SAM-dependent methyltransferase | chromosome | CDS | 3997283 | 753 | + | 0.581673 | |
yigI | hypothetical protein | chromosome | CDS | 3631984 | 468 | + | 0.532051 | |
yjcS | predicted alkyl sulfatase | chromosome | CDS | 4308091 | 1986 | - | 0.529204 | |
yjgI | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 4478020 | 714 | - | 0.543417 | |
yjhP | predicted methyltransferase | chromosome | CDS | 4537117 | 747 | - | 0.595716 | |
ymfD | predicted SAM-dependent methyltransferase | chromosome | CDS | 1198444 | 666 | - | 0.348348 | |
ynbC | predicted hydrolase | chromosome | CDS | 1480852 | 1758 | + | 0.509101 | |
yohF | predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain | chromosome | CDS | 2229843 | 762 | - | 0.551181 | |
yojI | fused predicted multidrug transport subunits and membrane component and ATP-binding component of ABC superfamily | chromosome | CDS | 2310306 | 1644 | - | 0.534063 | |
ypjA | adhesin-like autotransporter | chromosome | CDS | 2776802 | 4581 | - | 0.492032 | |
yrbC | predicted ABC-type organic solvent transporter | chromosome | CDS | 3337111 | 636 | - | 0.523585 | |
yrbD | predicted ABC-type organic solvent transporter | chromosome | CDS | 3337765 | 552 | - | 0.498188 | |
yrbE | predicted toluene transporter subunit | chromosome | CDS | 3338321 | 783 | - | 0.551724 | |
ysgA | predicted hydrolase | chromosome | CDS | 3620512 | 816 | + | 0.545343 | |
Photorhabdus luminescens subsp. laumondii TTO1, TTO1 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | plu0760 | hypothetical protein | chromosome | CDS | 878406 | 1578 | - | 0.345374 |
NA | plu4621 | hypothetical protein | chromosome | CDS | 5385534 | 1824 | + | 0.427632 |
NA | plu0511 | hypothetical protein | chromosome | CDS | 561985 | 1206 | - | 0.484245 |
NA | plu3819 | short chain dehydrogenase | chromosome | CDS | 4487463 | 786 | + | 0.455471 |
NA | plu2103 | hypothetical protein | chromosome | CDS | 2488178 | 759 | - | 0.440053 |
NA | plu1210 | hypothetical protein | chromosome | CDS | 1392054 | 972 | + | 0.424897 |
NA | plu1341 | hypothetical protein | chromosome | CDS | 1577798 | 11019 | + | 0.471458 |
NA | plu2966 | hypothetical protein | chromosome | CDS | 3472144 | 906 | - | 0.497792 |
NA | plu0123 | hypothetical protein | chromosome | CDS | 129035 | 744 | - | 0.505376 |
NA | plu2219 | hypothetical protein | chromosome | CDS | 2607476 | 246 | + | 0.292683 |
NA | plu4631 | hypothetical protein | chromosome | CDS | 5400490 | 471 | + | 0.426752 |
NA | plu4351 | hypothetical protein | chromosome | CDS | 5084097 | 939 | - | 0.455804 |
NA | plu2450 | short chain dehydrogenase | chromosome | CDS | 2877523 | 765 | + | 0.469281 |
NA | plu2323 | hypothetical protein | chromosome | CDS | 2739282 | 777 | + | 0.471042 |
NA | plu3531 | hypothetical protein | chromosome | CDS | 4130187 | 1839 | - | 0.387167 |
NA | plu4894 | hypothetical protein | chromosome | CDS | 5668798 | 954 | - | 0.33543 |
NA | plu2733 | hypothetical protein | chromosome | CDS | 3241008 | 4392 | + | 0.38775 |
NA | plu2321 | hypothetical protein | chromosome | CDS | 2726435 | 11727 | + | 0.481794 |
NA | plu2075 | hypothetical protein | chromosome | CDS | 2458486 | 693 | + | 0.401154 |
NA | plu4262 | hypothetical protein | chromosome | CDS | 4986690 | 1326 | + | 0.361237 |
NA | plu0246 | hypothetical protein | chromosome | CDS | 262042 | 1554 | + | 0.45045 |
NA | plu3921 | hypothetical protein | chromosome | CDS | 4598801 | 1854 | - | 0.455771 |
NA | plu1001 | hypothetical protein | chromosome | CDS | 1186748 | 450 | + | 0.308889 |
NA | plu2217 | hypothetical protein | chromosome | CDS | 2605416 | 1266 | + | 0.42496 |
NA | plu2796 | hypothetical protein | chromosome | CDS | 3320221 | 2808 | + | 0.433048 |
NA | plu4629 | hypothetical protein | chromosome | CDS | 5396476 | 1302 | + | 0.403994 |
NA | plu1880 | hypothetical protein | chromosome | CDS | 2226516 | 12483 | - | 0.487543 |
NA | plu2816 | hypothetical protein | chromosome | CDS | 3345783 | 978 | + | 0.373211 |
NA | plu4191 | hypothetical protein | chromosome | CDS | 4904466 | 1287 | - | 0.425019 |
NA | plu2258 | hypothetical protein | chromosome | CDS | 2650221 | 1194 | - | 0.386097 |
NA | plu0250 | hypothetical protein | chromosome | CDS | 267752 | 744 | + | 0.399194 |
NA | plu2408 | hypothetical protein | chromosome | CDS | 2827701 | 1386 | - | 0.310245 |
NA | plu0756 | hypothetical protein | chromosome | CDS | 871792 | 1566 | - | 0.39719 |
NA | plu2817 | hypothetical protein | chromosome | CDS | 3346772 | 846 | + | 0.373522 |
NA | plu2313 | hypothetical protein | chromosome | CDS | 2709005 | 1854 | + | 0.445523 |
NA | plu3130 | hypothetical protein | chromosome | CDS | 3678528 | 9936 | - | 0.529589 |
NA | plu1878 | hypothetical protein | chromosome | CDS | 2222028 | 3198 | - | 0.469043 |
NA | plu1211 | hypothetical protein | chromosome | CDS | 1393004 | 1785 | + | 0.419608 |
NA | plu2737 | hypothetical protein | chromosome | CDS | 3248491 | 231 | + | 0.402597 |
NA | plu0898 | hypothetical protein | chromosome | CDS | 1025128 | 4734 | + | 0.436206 |
NA | plu4891 | hypothetical protein | chromosome | CDS | 5664296 | 954 | - | 0.319706 |
NA | plu0977 | hypothetical protein | chromosome | CDS | 1160183 | 747 | - | 0.457831 |
NA | plu2625 | hypothetical protein | chromosome | CDS | 3070999 | 417 | - | 0.448441 |
NA | plu0296 | hypothetical protein | chromosome | CDS | 313663 | 1224 | - | 0.373366 |
NA | plu3534 | hypothetical protein | chromosome | CDS | 4145277 | 9813 | - | 0.472027 |
NA | plu4678 | hypothetical protein | chromosome | CDS | 5454513 | 744 | + | 0.435484 |
NA | plu2186 | hypothetical protein | chromosome | CDS | 2570086 | 3855 | + | 0.378988 |
NA | plu1212 | hypothetical protein | chromosome | CDS | 1394785 | 3804 | + | 0.456625 |
NA | plu1217 | hypothetical protein | chromosome | CDS | 1407172 | 765 | + | 0.445752 |
NA | plu4188 | hypothetical protein | chromosome | CDS | 4901504 | 1548 | - | 0.347545 |
NA | plu2201 | hypothetical protein | chromosome | CDS | 2589485 | 783 | - | 0.440613 |
NA | plu0972 | hypothetical protein | chromosome | CDS | 1151820 | 720 | + | 0.3875 |
NA | plu4034 | hypothetical protein | chromosome | CDS | 4724493 | 804 | - | 0.455224 |
NA | plu4892 | hypothetical protein | chromosome | CDS | 5665879 | 954 | - | 0.323899 |
NA | plu4194 | hypothetical protein | chromosome | CDS | 4907928 | 777 | - | 0.406692 |
NA | plu1213 | hypothetical protein | chromosome | CDS | 1398591 | 5010 | + | 0.445709 |
NA | plu0765 | hypothetical protein | chromosome | CDS | 884051 | 264 | - | 0.32197 |
NA | plu3923 | hypothetical protein | chromosome | CDS | 4601127 | 588 | - | 0.433673 |
NA | plu4117 | hypothetical protein | chromosome | CDS | 4803949 | 1158 | - | 0.313471 |
NA | plu4890 | hypothetical protein | chromosome | CDS | 5662379 | 957 | - | 0.327064 |
NA | plu1323 | hypothetical protein | chromosome | CDS | 1539045 | 450 | + | 0.38 |
NA | plu1871 | hypothetical protein | chromosome | CDS | 2215467 | 786 | + | 0.431298 |
NA | plu4833 | hypothetical protein | chromosome | CDS | 5607629 | 699 | + | 0.340486 |
NA | plu3668 | hypothetical protein | chromosome | CDS | 4318729 | 1266 | + | 0.380727 |
NA | plu4836 | hypothetical protein | chromosome | CDS | 5609561 | 720 | + | 0.318056 |
NA | plu4033 | hypothetical protein | chromosome | CDS | 4723700 | 783 | - | 0.508301 |
NA | plu2322 | hypothetical protein | chromosome | CDS | 2738158 | 1098 | + | 0.461749 |
NA | plu4190 | hypothetical protein | chromosome | CDS | 4903358 | 1116 | - | 0.396953 |
NA | plu3123 | hypothetical protein | chromosome | CDS | 3646119 | 16374 | - | 0.530231 |
NA | plu0941 | hypothetical protein | chromosome | CDS | 1083473 | 714 | + | 0.442577 |
NA | plu4419 | hypothetical protein | chromosome | CDS | 5167715 | 834 | - | 0.340528 |
NA | plu3535 | hypothetical protein | chromosome | CDS | 4155089 | 9858 | - | 0.42392 |
NA | plu3263 | hypothetical protein | chromosome | CDS | 3865127 | 15651 | - | 0.521372 |
NA | plu0897 | hypothetical protein | chromosome | CDS | 1021625 | 3507 | + | 0.410607 |
NA | plu3135 | hypothetical protein | chromosome | CDS | 3694556 | 1611 | - | 0.402855 |
NA | plu1884 | hypothetical protein | chromosome | CDS | 2246068 | 1566 | + | 0.464879 |
NA | plu0841 | hypothetical protein | chromosome | CDS | 973244 | 540 | + | 0.451852 |
NA | plu4027 | hypothetical protein | chromosome | CDS | 4718277 | 1560 | + | 0.433333 |
NA | plu4336 | hypothetical protein | chromosome | CDS | 5064178 | 1473 | + | 0.367278 |
NA | plu3102 | hypothetical protein | chromosome | CDS | 3621255 | 825 | - | 0.518788 |
NA | plu3560 | hypothetical protein | chromosome | CDS | 4193684 | 1296 | - | 0.465278 |
NA | plu0899 | hypothetical protein | chromosome | CDS | 1029858 | 6030 | + | 0.42272 |
NA | plu4895 | hypothetical protein | chromosome | CDS | 5670464 | 954 | - | 0.324948 |
NA | plu4510 | hypothetical protein | chromosome | CDS | 5269014 | 1587 | + | 0.47511 |
NA | plu4032 | hypothetical protein | chromosome | CDS | 4723189 | 507 | - | 0.447732 |
NA | plu2165 | hypothetical protein | chromosome | CDS | 2550941 | 243 | + | 0.386831 |
NA | plu2102 | hypothetical protein | chromosome | CDS | 2487210 | 972 | - | 0.455761 |
NA | plu2670 | hypothetical protein | chromosome | CDS | 3124571 | 49104 | - | 0.52232 |
NA | plu4258 | hypothetical protein | chromosome | CDS | 4981557 | 1446 | - | 0.399723 |
NA | plu1004 | hypothetical protein | chromosome | CDS | 1190069 | 948 | + | 0.35443 |
NA | plu4031 | hypothetical protein | chromosome | CDS | 4722526 | 630 | - | 0.433333 |
NA | plu4630 | hypothetical protein | chromosome | CDS | 5397777 | 2418 | + | 0.435484 |
NA | plu2239 | hypothetical protein | chromosome | CDS | 2633894 | 978 | - | 0.445808 |
NA | plu4676 | hypothetical protein | chromosome | CDS | 5452379 | 1266 | + | 0.456556 |
NA | plu1541 | hypothetical protein | chromosome | CDS | 1843750 | 747 | - | 0.460509 |
NA | plu2320 | hypothetical protein | chromosome | CDS | 2720286 | 6150 | + | 0.47252 |
NA | plu3530 | hypothetical protein | chromosome | CDS | 4128470 | 1677 | - | 0.35003 |
NA | plu4183 | hypothetical protein | chromosome | CDS | 4894114 | 1104 | - | 0.355978 |
NA | plu4675 | hypothetical protein | chromosome | CDS | 5451987 | 237 | + | 0.337553 |
NA | plu3532 | hypothetical protein | chromosome | CDS | 4132061 | 9816 | - | 0.452119 |
NA | plu1219 | hypothetical protein | chromosome | CDS | 1409456 | 1236 | + | 0.442557 |
NA | plu4189 | hypothetical protein | chromosome | CDS | 4903075 | 249 | - | 0.333333 |
NA | plu2187 | hypothetical protein | chromosome | CDS | 2574027 | 957 | + | 0.434692 |
NA | plu2237 | hypothetical protein | chromosome | CDS | 2631904 | 948 | + | 0.361814 |
NA | plu1220 | hypothetical protein | chromosome | CDS | 1410701 | 3183 | + | 0.431668 |
NA | plu2140 | hypothetical protein | chromosome | CDS | 2523480 | 657 | + | 0.452055 |
NA | plu2798 | pteridine reductase | chromosome | CDS | 3324441 | 765 | + | 0.426144 |
NA | plu0998 | hypothetical protein | chromosome | CDS | 1183567 | 294 | + | 0.404762 |
NA | plu2642 | hypothetical protein | chromosome | CDS | 3092574 | 2751 | + | 0.416576 |
NA | plu1885 | hypothetical protein | chromosome | CDS | 2247626 | 1851 | + | 0.460832 |
NA | plu4268 | hypothetical protein | chromosome | CDS | 4993354 | 1302 | + | 0.364823 |
NA | plu3533 | hypothetical protein | chromosome | CDS | 4141873 | 3402 | - | 0.461199 |
NA | plu2353 | hypothetical protein | chromosome | CDS | 2772416 | 1113 | - | 0.439353 |
acpP | plu2832 | acyl carrier protein (cytosolic activating factor) (CAF) | chromosome | CDS | 3362880 | 237 | - | 0.396624 |
bioC | plu1487 | biotin synthesis protein | chromosome | CDS | 1780394 | 768 | + | 0.454427 |
cpmC | plu0184 | CpmC protein involved in carbapenem biosynthesis | chromosome | CDS | 194707 | 822 | + | 0.349148 |
crtI | plu4342 | phytoene dehydrogenase (phytoene desaturase) | chromosome | CDS | 5070119 | 1482 | + | 0.481781 |
cueO | plu0845 | Blue copper oxidase CueO precursor | chromosome | CDS | 976364 | 1545 | + | 0.476375 |
dltA | plu4384 | D-alanine-activating enzyme (DAE) (D-alanine-D-alanyl carrier protein ligase) (DCL) | chromosome | CDS | 5118630 | 1464 | + | 0.321038 |
dltC | plu4381 | D-alanine carrier protein DltC | chromosome | CDS | 5115942 | 225 | + | 0.328889 |
elbB | plu4007 | enhancing lycopene biosynthesis protein 2 (sigma cross-reacting protein 27A) (SCRP-27A) | chromosome | CDS | 4692171 | 654 | - | 0.397554 |
entA | plu2727 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 3234194 | 747 | - | 0.420348 |
entB | plu2728 | isochorismatase (2,3-dihydro-2,3-dihydroxybenzoate synthetase) | chromosome | CDS | 3235008 | 654 | - | 0.353211 |
entE | plu2729 | 2,3-dihydroxybenzoate--[carrier protein] ligase (enterobactin synthetase component E) | chromosome | CDS | 3235684 | 1620 | - | 0.396296 |
fabB | plu3184 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 3745826 | 1215 | - | 0.454321 |
fabF | plu2831 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 3361556 | 1251 | - | 0.471623 |
fabG | plu2833 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 3363271 | 735 | - | 0.461224 |
fabG | plu2344 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 2761480 | 771 | - | 0.516213 |
fadD | plu2134 | acyl-CoA synthase | chromosome | CDS | 2517873 | 1683 | + | 0.427213 |
hcaB | plu2207 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | chromosome | CDS | 2594591 | 843 | + | 0.475682 |
hcaF | plu2205 | 3-phenylpropionate dioxygenase beta subunit (digoxigenin beta subunit) | chromosome | CDS | 2593732 | 543 | + | 0.429098 |
hpaB | plu0975 | 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component (4-HPA 3-monooxygenase large component) (4-HPA 3-hydroxylase) | chromosome | CDS | 1155152 | 1563 | - | 0.46961 |
hpaG1 | plu0990 | hypothetical protein | chromosome | CDS | 1173611 | 633 | - | 0.488152 |
hpaG2 | plu0989 | hypothetical protein | chromosome | CDS | 1172853 | 762 | - | 0.485564 |
hpcG | plu0983 | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | chromosome | CDS | 1166542 | 804 | - | 0.5 |
hutI | plu3197 | imidazolonepropionase | chromosome | CDS | 3761472 | 1248 | - | 0.453526 |
menE | plu3069 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 3577479 | 1401 | - | 0.452534 |
menF | plu3074 | menaquinone-specific isochorismate synthase | chromosome | CDS | 3583269 | 1320 | - | 0.475 |
ngrA | plu0992 | 4'-phosphopantetheinyl tranferase | chromosome | CDS | 1175153 | 744 | - | 0.403226 |
pncA | plu2555 | Pyrazinamidase/nicotinamidase [Includes: Pyrazinamidase (PZASE); Nicotinamidase (Nicotine deamidase)] | chromosome | CDS | 2999887 | 639 | + | 0.452269 |
prtA | plu0655 | Alkaline metalloprotease precursor PrtA | chromosome | CDS | 752825 | 1443 | + | 0.43659 |
rrmA | plu2702 | ribosomal RNA large subunit methyltransferase A | chromosome | CDS | 3203472 | 819 | - | 0.426129 |
smtA | plu1636 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 1953543 | 780 | + | 0.425641 |
sufI | plu3947 | Protein SufI precursor | chromosome | CDS | 4631472 | 1422 | - | 0.468354 |
tehB | plu3742 | Tellurite resistance protein TehB | chromosome | CDS | 4414485 | 858 | - | 0.339161 |
ybbA | plu3817 | Probable ABC transporter ATP-binding protein YbbA | chromosome | CDS | 4486123 | 687 | - | 0.467249 |
ybbP | plu3816 | Probable ABC transporter permease protein YbbP | chromosome | CDS | 4483694 | 2433 | - | 0.475545 |
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, B67 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SC002 | hypothetical protein | pSC138 | CDS | 1068 | 393 | + | 0.613232 |
yusZ | SC046 | short chain dehydrogenase | pSC138 | CDS | 35635 | 864 | + | 0.439815 |
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, SC-B67 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SC2018 | putative cytoplasmic protein | chromosome | CDS | 2114698 | 327 | - | 0.409786 |
acp | SC1144 | acyl carrier protein | chromosome | CDS | 1260171 | 237 | + | 0.476793 |
bioC | SC0794 | biotin biosynthesis; reaction prior to pimeloyl CoA | chromosome | CDS | 890976 | 756 | + | 0.596561 |
caiC | SC0065 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 76645 | 1554 | - | 0.51094 |
cueO | SC0168 | putative multicopper oxidase | chromosome | CDS | 192642 | 1611 | + | 0.563625 |
dlhH | SC3865 | putative dienelactone hydrolase family | chromosome | CDS | 4108025 | 813 | - | 0.573186 |
entA | SC0629 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 702475 | 756 | + | 0.583333 |
entB | SC0628 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochorismatase | chromosome | CDS | 701618 | 858 | + | 0.567599 |
entC | SC0626 | isochorismate synthase | chromosome | CDS | 698878 | 1107 | + | 0.585366 |
entD | SC0615 | enterochelin synthetase, component D (phoshpantetheinyltransferase) | chromosome | CDS | 683361 | 705 | - | 0.556028 |
entE | SC0627 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 699994 | 1611 | + | 0.572936 |
entF | SC0619 | enterobactin synthetase, component F (nonribosomal peptide synthetase) | chromosome | CDS | 688015 | 3885 | + | 0.588932 |
eutM | SC2461 | putative detox protein in ethanolamine utilization | chromosome | CDS | 2589814 | 291 | - | 0.61512 |
eutN | SC2460 | putative detox protein in ethanolamine utilization | chromosome | CDS | 2589414 | 288 | - | 0.572917 |
faaH | SC0376 | putative fumarylacetoacetate (FAA) hydrolase | chromosome | CDS | 419375 | 879 | + | 0.499431 |
fabB | SC2380 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2503032 | 1215 | - | 0.571193 |
fabF | SC1145 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1260493 | 1242 | + | 0.550725 |
fabG | SC1143 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1259281 | 735 | + | 0.50068 |
fadD | SC1811 | acyl-CoA synthase | chromosome | CDS | 1930394 | 1542 | - | 0.523995 |
fst | SC2194 | putative flutathione S-transferase | chromosome | CDS | 2296146 | 702 | - | 0.545584 |
gdo | SC2195 | putative 1,2-dioxygenase protein | chromosome | CDS | 2296863 | 1038 | - | 0.565511 |
hpaB | SC1049 | 4-hydroxyphenylacetate catabolism | chromosome | CDS | 1165150 | 1563 | - | 0.526551 |
hpaG | SC1051 | 4-hydroxyphenylacetate catabolism | chromosome | CDS | 1167645 | 1290 | + | 0.558915 |
hpaH | SC1055 | 4-hydroxyphenylacetate catabolism | chromosome | CDS | 1171773 | 804 | + | 0.588308 |
hutI | SC0785 | imidazolonepropionase | chromosome | CDS | 880429 | 1263 | + | 0.581948 |
iacp | SC2813 | acyl carrier protein | chromosome | CDS | 2977940 | 249 | - | 0.389558 |
idnO | SC4339 | gluconate 5-dehydrogenase | chromosome | CDS | 4641150 | 765 | - | 0.534641 |
kduD | SC2956 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3137265 | 762 | - | 0.515748 |
menE | SC2305 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2425952 | 1368 | - | 0.597953 |
menF | SC2310 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2431661 | 1296 | - | 0.568673 |
pduA | SC2046 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 2138585 | 285 | + | 0.536842 |
pduC | SC2048 | Propanediol utilization: dehydratase, large subunit | chromosome | CDS | 2139697 | 1665 | + | 0.568168 |
pduE | SC2050 | Propanediol utilization: dehydratase, small subunit | chromosome | CDS | 2142061 | 522 | + | 0.570881 |
pduJ | SC2053 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 2144789 | 276 | + | 0.557971 |
pduK | SC2054 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 2145068 | 483 | + | 0.554865 |
pduL | SC2055 | Propanediol utilization | chromosome | CDS | 2145550 | 633 | + | 0.598736 |
pduN | SC2057 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 2146674 | 276 | + | 0.608696 |
pduT | SC2062 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 2151839 | 330 | + | 0.545455 |
pduX | SC2067 | Propanediol utilization | chromosome | CDS | 2154006 | 903 | + | 0.55371 |
pncA | SC1315 | nicotinamidase/ pyrazinamidase | chromosome | CDS | 1412134 | 624 | - | 0.570513 |
rrmA | SC1829 | 23S rRNA m1G745 methyltransferase | chromosome | CDS | 1947884 | 810 | - | 0.561728 |
slsA | SC3682 | putative inner membrane protein | chromosome | CDS | 3898353 | 681 | + | 0.522761 |
smtA | SC0949 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 1062668 | 804 | + | 0.549751 |
srlD | SC2768 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 2934638 | 780 | + | 0.547436 |
stcD | SC2164 | putative outer membrane lipoprotein | chromosome | CDS | 2265349 | 1008 | - | 0.411706 |
sufI | SC3116 | suppressor of ftsI, putative periplasmic protein | chromosome | CDS | 3295229 | 1413 | - | 0.585987 |
tehB | SC1605 | paral putative methyltransferase; tellurite resistance | chromosome | CDS | 1711518 | 597 | - | 0.499162 |
ucpA | SC2444 | short chain dehydrogenase | chromosome | CDS | 2572350 | 792 | - | 0.537879 |
yafE | SC0255 | putative methyltransferase in menaquinone/biotin biosynthesis | chromosome | CDS | 295006 | 771 | + | 0.520104 |
yafS | SC0258 | putative SAM-dependent methyltransferase | chromosome | CDS | 298061 | 723 | + | 0.510373 |
ybbA | SC0548 | putative ABC superfamily (atp_bind) transporter | chromosome | CDS | 610796 | 687 | + | 0.590975 |
ybbO | SC0546 | short chain dehydrogenase | chromosome | CDS | 609286 | 771 | - | 0.546044 |
ybbP | SC0549 | putative inner membrane protein | chromosome | CDS | 611479 | 2415 | + | 0.580538 |
ybcY | SC1634 | putative SAM-dependent methyltransferase | chromosome | CDS | 1742046 | 663 | + | 0.466063 |
ybdB | SC0630 | putative protein PaaI, possibly involved in aromatic compounds catabolism | chromosome | CDS | 703233 | 414 | + | 0.603865 |
ycaC | SC0904 | Homolog of slsA in STM | chromosome | CDS | 1011610 | 678 | - | 0.541298 |
ycgM | SC1805 | putative Fumarylacetoacetate (FAA) hydrolase family | chromosome | CDS | 1926132 | 660 | - | 0.533333 |
yciK | SC1714 | short chain dehydrogenase | chromosome | CDS | 1827501 | 762 | + | 0.566929 |
yczH | SC4361 | putative dienelactone hydrolase | chromosome | CDS | 4667706 | 675 | - | 0.536296 |
ydcO | SC1603 | putative benzoate membrane transport protein | chromosome | CDS | 1709394 | 1239 | + | 0.567393 |
ydiD | SC1369 | hypothetical protein | chromosome | CDS | 1466297 | 1686 | - | 0.527877 |
ydiI | SC1386 | putative protein PaaI, possibly involved in aromatic compounds catabolism | chromosome | CDS | 1486979 | 411 | + | 0.569343 |
yecD | SC1910 | putative isochorismatase | chromosome | CDS | 2019789 | 567 | + | 0.555556 |
yecO | SC1913 | putative SAM-dependent methyltransferase | chromosome | CDS | 2021659 | 744 | + | 0.530914 |
yecP | SC1914 | putative enzyme | chromosome | CDS | 2022399 | 972 | + | 0.552469 |
yghA | SC3099 | oxidoreductase | chromosome | CDS | 3278037 | 885 | + | 0.564972 |
yhbL | SC3265 | sigma cross-reacting protein 27A (SCRP-27A) | chromosome | CDS | 3444354 | 654 | - | 0.568807 |
yhiQ | SC3522 | putative SAM-dependent methyltransferase | chromosome | CDS | 3717306 | 759 | - | 0.620553 |
yigI | SC3855 | putative protein PaaI, possibly involved in aromatic compounds catabolism | chromosome | CDS | 4095233 | 486 | - | 0.563786 |
yjcS | SC1867 | putative hydrolase | chromosome | CDS | 1978287 | 1980 | - | 0.496465 |
yjgI | SC1669 | oxidoreductase | chromosome | CDS | 1781129 | 714 | + | 0.571429 |
yjhP | SC4356 | putative SAM-dependent methyltransferase | chromosome | CDS | 4662789 | 1632 | - | 0.546569 |
yohF | SC2187 | oxidoreductase | chromosome | CDS | 2290516 | 762 | - | 0.549869 |
yojI | SC2267 | putative ABC-type multidrug/protein/lipid transport system, ATPase component | chromosome | CDS | 2375046 | 1644 | - | 0.551095 |
yrbC | SC3248 | putative ABC superfamily (atp&memb), transport protein | chromosome | CDS | 3431688 | 636 | - | 0.531447 |
yrbD | SC3249 | putative ABC superfamily (bind_prot) transport protein | chromosome | CDS | 3432342 | 552 | - | 0.512681 |
yrbE | SC3250 | putative ABC superfamily (membr) transport protein | chromosome | CDS | 3432898 | 783 | - | 0.57599 |
yrbF | SC3251 | putative ABC superfamily (atp_bind) transport protein | chromosome | CDS | 3433688 | 813 | - | 0.580566 |
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, ATCC 9150 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SPA0862 | hypothetical protein | chromosome | CDS | 952540 | 327 | + | 0.412844 |
NA | SPA0673 | putative gentisate 1,2-dioxygenase | chromosome | CDS | 755875 | 1038 | + | 0.565511 |
NA | SPA1489 | hypothetical protein | chromosome | CDS | 1562643 | 354 | - | 0.581921 |
NA | SPA1848 | hypothetical protein | chromosome | CDS | 1924179 | 678 | + | 0.538348 |
NA | SPA4325 | hypothetical protein | chromosome | CDS | 4499988 | 666 | - | 0.543544 |
NA | SPA0674 | FAA-hydrolase-family protein | chromosome | CDS | 756928 | 702 | + | 0.54416 |
acpP | SPA1655 | acyl carrier protein | chromosome | CDS | 1719842 | 237 | - | 0.476793 |
bioC | SPA1956 | biotin synthesis protein BioC | chromosome | CDS | 2036967 | 756 | - | 0.597884 |
caiC | SPA0072 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 82318 | 1554 | - | 0.502574 |
entA | SPA2136 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 2221816 | 756 | - | 0.583333 |
entB | SPA2137 | isochorismatase | chromosome | CDS | 2222571 | 858 | - | 0.564103 |
entC | SPA2139 | isochorismate synthase | chromosome | CDS | 2225062 | 1170 | - | 0.587179 |
entD | SPA2150 | enterobactin synthetase component D | chromosome | CDS | 2240981 | 705 | + | 0.558865 |
entE | SPA2138 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 2223442 | 1614 | - | 0.574969 |
entF | SPA2146 | enterobactin synthetase component F | chromosome | CDS | 2233146 | 3885 | - | 0.591506 |
eutK | SPA0413 | ethanolamine utilization protein EutK | chromosome | CDS | 484221 | 495 | + | 0.612121 |
eutM | SPA0404 | putative ethanolamine utilization protein EutN | chromosome | CDS | 474896 | 348 | + | 0.577586 |
eutN | SPA0403 | putative ethanolamine utilization protein EutN | chromosome | CDS | 474553 | 291 | + | 0.604811 |
fabB | SPA0486 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 558073 | 1215 | + | 0.567901 |
fabF | SPA1654 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1718515 | 1242 | - | 0.550725 |
fabG | SPA1656 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1720234 | 735 | - | 0.50068 |
fadD | SPA1055 | acyl-CoA synthase | chromosome | CDS | 1125229 | 1686 | + | 0.520759 |
hpaB | SPA1751 | 4-hydroxyphenylacetate 3-monooxygenase | chromosome | CDS | 1811291 | 1308 | + | 0.537462 |
hpcG | SPA1745 | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | chromosome | CDS | 1805163 | 804 | - | 0.59204 |
hutI | SPA1965 | imidazolonepropionase | chromosome | CDS | 2047007 | 1224 | - | 0.578431 |
idnO | SPA4283 | gluconate 5-dehydrogenase | chromosome | CDS | 4457205 | 765 | - | 0.530719 |
kduD | SPA2884 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2995204 | 762 | - | 0.523622 |
menE | SPA0558 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 632251 | 1368 | + | 0.605263 |
menF | SPA0553 | menaquinone-specific isochorismate synthase | chromosome | CDS | 626614 | 1296 | + | 0.56713 |
nhoA | SPA1286 | N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 1361005 | 846 | + | 0.520095 |
pduA | SPA0833 | putative propanediol utilization protein PduA | chromosome | CDS | 928696 | 285 | - | 0.533333 |
pduC | SPA0831 | glycerol dehydratase large subunit | chromosome | CDS | 926204 | 1665 | - | 0.568769 |
pduE | SPA0829 | diol dehydratase small subunit | chromosome | CDS | 924983 | 522 | - | 0.563218 |
pduJ | SPA0826 | putative propanediol utilization protein PduJ | chromosome | CDS | 922310 | 276 | - | 0.557971 |
pduK | SPA0825 | putative propanediol utilization protein PduK | chromosome | CDS | 921824 | 483 | - | 0.554865 |
pduL | SPA0824 | hypothetical protein | chromosome | CDS | 921192 | 633 | - | 0.589257 |
pduN | SPA0822 | Propanediol utilization: polyhedral bodies | chromosome | CDS | 920425 | 276 | - | 0.619565 |
pduT | SPA0817 | putative propanediol utilization protein PduT | chromosome | CDS | 914987 | 555 | - | 0.585586 |
pduX | SPA0813 | hypothetical protein | chromosome | CDS | 912021 | 903 | - | 0.55371 |
pncA | SPA1551 | pyrazinamidase/nicotinamidase | chromosome | CDS | 1627069 | 657 | + | 0.57382 |
rrmA | SPA1038 | rRNA guanine-N1-methyltransferase | chromosome | CDS | 1108616 | 810 | + | 0.562963 |
sipF | SPA2739 | acyl carrier protein | chromosome | CDS | 2838958 | 249 | - | 0.381526 |
slsA | SPA3611 | hypothetical protein | chromosome | CDS | 3747889 | 681 | + | 0.524229 |
smtA | SPA1807 | SmtA protein | chromosome | CDS | 1874281 | 804 | - | 0.548507 |
srlD | SPA2693 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 2795647 | 780 | + | 0.552564 |
sufI | SPA3041 | SufI protein | chromosome | CDS | 3145047 | 1413 | - | 0.58811 |
tehB | SPA1261 | tellurite resistance protein TehB | chromosome | CDS | 1332007 | 597 | + | 0.500838 |
yacK | SPA0171 | possible multicopper oxidase precursor | chromosome | CDS | 198809 | 1611 | + | 0.562384 |
yafE | SPA2510 | putative methyltransferase | chromosome | CDS | 2609159 | 771 | - | 0.522698 |
yafS | SPA2507 | hypothetical protein | chromosome | CDS | 2606152 | 723 | - | 0.510373 |
ybbA | SPA2215 | hypothetical ABC transporter ATP-binding protein | chromosome | CDS | 2306120 | 687 | - | 0.58952 |
ybbO | SPA2217 | short chain dehydrogenase | chromosome | CDS | 2307546 | 771 | + | 0.546044 |
ybbP | SPA2214 | hypothetical protein | chromosome | CDS | 2303709 | 2415 | - | 0.587992 |
ybdB | SPA2135 | hypothetical protein | chromosome | CDS | 2221400 | 414 | - | 0.601449 |
ycgM | SPA1061 | putative hydrolase | chromosome | CDS | 1130518 | 660 | + | 0.531818 |
yciK | SPA1159 | short chain dehydrogenase | chromosome | CDS | 1227212 | 762 | - | 0.565617 |
yecD | SPA0967 | putative hydrolase | chromosome | CDS | 1040011 | 567 | - | 0.559083 |
yecO | SPA0964 | hypothetical protein | chromosome | CDS | 1037964 | 744 | - | 0.532258 |
yecP | SPA0963 | hypothetical protein | chromosome | CDS | 1036996 | 972 | - | 0.546296 |
yfeF | SPA0421 | short chain dehydrogenase | chromosome | CDS | 490755 | 792 | + | 0.541667 |
yghA | SPA3025 | oxidoreductase | chromosome | CDS | 3127340 | 885 | + | 0.564972 |
yhbL | SPA3194 | hypothetical protein | chromosome | CDS | 3297075 | 654 | - | 0.568807 |
yhiQ | SPA3450 | hypothetical protein | chromosome | CDS | 3559847 | 759 | - | 0.628458 |
yigI | SPA3797 | hypothetical protein | chromosome | CDS | 3939210 | 468 | - | 0.566239 |
yjcS | SPA1006 | putative hydrolase | chromosome | CDS | 1078444 | 1980 | + | 0.493939 |
yjgI | SPA1209 | oxidoreductase | chromosome | CDS | 1278060 | 714 | - | 0.57563 |
yjhP | SPA4320 | hypothetical protein | chromosome | CDS | 4495028 | 1626 | - | 0.549815 |
yohF | SPA0680 | oxidoreductase | chromosome | CDS | 762499 | 762 | + | 0.541995 |
yojI | SPA0601 | putative ABC transporter ATP-binding protein | chromosome | CDS | 682863 | 1644 | + | 0.545012 |
yrbC | SPA3177 | possible exported protein | chromosome | CDS | 3284413 | 636 | - | 0.533019 |
yrbD | SPA3178 | possible exported protein | chromosome | CDS | 3285067 | 552 | - | 0.509058 |
yrbE | SPA3179 | hypothetical protein | chromosome | CDS | 3285623 | 783 | - | 0.578544 |
yrbF | SPA3180 | possible ABC-transport protein, ATP-binding component | chromosome | CDS | 3286413 | 813 | - | 0.583026 |
ysgA | SPA3808 | putative hydrolase | chromosome | CDS | 3952012 | 813 | - | 0.568266 |
Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | t1492 | N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 1544005 | 846 | - | 0.521277 |
NA | t0677 | putative gentisate 1,2-dioxygenase | chromosome | CDS | 762968 | 1038 | + | 0.567437 |
NA | t2352 | hypothetical protein | chromosome | CDS | 2418341 | 2415 | - | 0.584265 |
NA | t3230 | possible ABC-transport protein, ATP-binding component | chromosome | CDS | 3318967 | 813 | - | 0.580566 |
NA | t0678 | FAA-hydrolase-family protein | chromosome | CDS | 764021 | 702 | + | 0.54416 |
NA | t3077 | oxidoreductase | chromosome | CDS | 3159757 | 885 | + | 0.564972 |
NA | t4342 | Putative methyltransferase | chromosome | CDS | 4492231 | 891 | + | 0.538721 |
NA | t3228 | possible exported protein | chromosome | CDS | 3317621 | 552 | - | 0.514493 |
NA | t3229 | hypothetical protein | chromosome | CDS | 3318177 | 783 | - | 0.578544 |
NA | t1234 | hypothetical protein | chromosome | CDS | 1304257 | 393 | + | 0.582697 |
NA | t1983 | hypothetical protein | chromosome | CDS | 2042184 | 678 | + | 0.536873 |
NA | t3244 | hypothetical protein | chromosome | CDS | 3329629 | 654 | - | 0.568807 |
NA | t4550 | hypothetical protein | chromosome | CDS | 4702025 | 1629 | - | 0.547575 |
NA | t0866 | hypothetical protein | chromosome | CDS | 953913 | 327 | + | 0.412844 |
NA | t3923 | hypothetical protein | chromosome | CDS | 4060880 | 759 | + | 0.627141 |
NA | t1630 | short chain dehydrogenase | chromosome | CDS | 1689844 | 762 | + | 0.566929 |
NA | t1541 | hypothetical protein | chromosome | CDS | 1596603 | 438 | + | 0.481735 |
NA | t3227 | possible exported protein | chromosome | CDS | 3316967 | 636 | - | 0.531447 |
NA | t1515 | putative benzoate membrane transport protein | chromosome | CDS | 1571734 | 1239 | + | 0.569814 |
NA | t1914 | putative methyltransferase | chromosome | CDS | 1961813 | 474 | - | 0.521097 |
NA | t1579 | oxidoreductase | chromosome | CDS | 1638675 | 714 | + | 0.570028 |
NA | t1065 | putative hydrolase | chromosome | CDS | 1147913 | 660 | + | 0.531818 |
NA | t4555 | hypothetical protein | chromosome | CDS | 4706975 | 666 | - | 0.537538 |
NA | t2603 | hypothetical protein | chromosome | CDS | 2679382 | 723 | - | 0.504841 |
NA | t0971 | hypothetical protein | chromosome | CDS | 1060733 | 972 | - | 0.548354 |
NA | t4356 | hypothetical protein | chromosome | CDS | 4509837 | 1590 | + | 0.476101 |
NA | t0972 | hypothetical protein | chromosome | CDS | 1061701 | 744 | - | 0.532258 |
acpP | t1724 | acyl carrier protein | chromosome | CDS | 1791164 | 237 | - | 0.476793 |
bioC | t2091 | biotin synthesis protein BioC | chromosome | CDS | 2153378 | 756 | - | 0.601852 |
caiC | t0072 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 82372 | 1554 | - | 0.51094 |
entA | t2270 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 2336307 | 756 | - | 0.589947 |
entB | t2271 | isochorismatase | chromosome | CDS | 2337062 | 858 | - | 0.55711 |
entC | t2273 | isochorismate synthase | chromosome | CDS | 2339553 | 1170 | - | 0.588889 |
entD | t2284 | enterobactin synthetase component D | chromosome | CDS | 2355471 | 705 | + | 0.561702 |
entE | t2272 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 2337933 | 1614 | - | 0.578686 |
entF | t2280 | enterobactin synthetase component F | chromosome | CDS | 2347636 | 3885 | - | 0.589447 |
eutK | t0403 | ethanolamine utilization protein EutK | chromosome | CDS | 478843 | 495 | + | 0.608081 |
eutN | t0394 | putative ethanolamine utilization protein EutN | chromosome | CDS | 468997 | 690 | + | 0.591304 |
fabB | t0486 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 559857 | 1215 | + | 0.572839 |
fabF | t1723 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1789837 | 1242 | - | 0.549919 |
fabG | t1725 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1791556 | 735 | - | 0.502041 |
fadD | t1059 | acyl-CoA synthase | chromosome | CDS | 1142624 | 1686 | + | 0.523725 |
hpaB | t1820 | 4-hydroxyphenylacetate 3-monooxygenase | chromosome | CDS | 1883324 | 1308 | + | 0.534404 |
hpaG | t1818 | 2-hydroxyhepta-2,4-diene-1,7-dioate decarboxylase | chromosome | CDS | 1881214 | 1290 | - | 0.560465 |
hpcG | t1814 | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | chromosome | CDS | 1877562 | 804 | - | 0.589552 |
hutI | t2100 | imidazolonepropionase | chromosome | CDS | 2163429 | 1224 | - | 0.587418 |
kduD | t2927 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3020422 | 762 | - | 0.518373 |
menE | t0558 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 634081 | 1368 | + | 0.60307 |
menF | t0553 | menaquinone-specific isochorismate synthase | chromosome | CDS | 628444 | 1296 | + | 0.568673 |
pduA | t0836 | putative propanediol utilization protein PduA | chromosome | CDS | 930221 | 285 | - | 0.536842 |
pduC | t0834 | glycerol dehydratase large subunit | chromosome | CDS | 927729 | 1665 | - | 0.568769 |
pduE | t0832 | diol dehydratase small subunit | chromosome | CDS | 926508 | 522 | - | 0.563218 |
pduJ | t0829 | putative propanediol utilization protein PduJ | chromosome | CDS | 923834 | 276 | - | 0.554348 |
pduK | t0828 | putative propanediol utilization protein PduK | chromosome | CDS | 923348 | 483 | - | 0.563147 |
pduL | t0827 | hypothetical protein | chromosome | CDS | 922716 | 633 | - | 0.584518 |
pduT | t0820 | putative propanediol utilization protein PduT | chromosome | CDS | 916506 | 555 | - | 0.581982 |
pduX | t0816 | hypothetical protein | chromosome | CDS | 913540 | 903 | - | 0.557032 |
pncA | t1172 | pyrazinamidase/nicotinamidase | chromosome | CDS | 1238993 | 657 | - | 0.57382 |
rrmA | t1043 | rRNA guanine-N1-methyltransferase | chromosome | CDS | 1126011 | 810 | + | 0.560494 |
sipF | t2783 | acyl carrier protein | chromosome | CDS | 2862279 | 249 | - | 0.381526 |
slsA | t3757 | hypothetical protein | chromosome | CDS | 3873860 | 681 | - | 0.527166 |
smtA | t1943 | SmtA protein | chromosome | CDS | 1992357 | 804 | - | 0.557214 |
srlD | t2736 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 2818970 | 780 | + | 0.551282 |
sufI | t3093 | SufI protein | chromosome | CDS | 3177465 | 1413 | - | 0.588818 |
tehB | t1517 | tellurite resistance protein TehB | chromosome | CDS | 1573850 | 597 | - | 0.502513 |
yacK | t0173 | possible multicopper oxidase precursor | chromosome | CDS | 198711 | 1611 | + | 0.562384 |
yafE | t2606 | putative methyltransferase | chromosome | CDS | 2682389 | 771 | - | 0.522698 |
ybbA | t2354 | hypothetical ABC transporter ATP-binding protein | chromosome | CDS | 2420752 | 687 | - | 0.586608 |
ybbO | t2355 | short chain dehydrogenase | chromosome | CDS | 2422178 | 771 | + | 0.551232 |
ybdB | t2269 | hypothetical protein | chromosome | CDS | 2335891 | 414 | - | 0.596618 |
yecD | t0975 | putative hydrolase | chromosome | CDS | 1063748 | 567 | - | 0.560847 |
yfeF | t0413 | short chain dehydrogenase | chromosome | CDS | 487106 | 792 | + | 0.540404 |
yigI | t3341 | hypothetical protein | chromosome | CDS | 3443693 | 468 | + | 0.568376 |
yjcS | t1012 | putative hydrolase | chromosome | CDS | 1095911 | 1980 | + | 0.49596 |
yjhP | t4343 | hypothetical protein | chromosome | CDS | 4493121 | 747 | + | 0.542169 |
yohF | t0684 | oxidoreductase | chromosome | CDS | 769591 | 762 | + | 0.548556 |
yojI | t0601 | putative ABC transporter ATP-binding protein | chromosome | CDS | 685357 | 1644 | + | 0.55292 |
ysgA | t3330 | putative hydrolase | chromosome | CDS | 3430556 | 813 | + | 0.568266 |
Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | STY3492 | possible ABC-transport protein, ATP-binding component | chromosome | CDS | 3333472 | 813 | - | 0.580566 |
NA | STY1942 | putative hydrolase | chromosome | CDS | 1832560 | 660 | - | 0.533333 |
NA | STY2114 | hypothetical protein | chromosome | CDS | 1964777 | 972 | + | 0.548354 |
NA | STY2113 | hypothetical protein | chromosome | CDS | 1964037 | 744 | + | 0.532258 |
NA | STY1458 | putative benzoate membrane transport protein | chromosome | CDS | 1408209 | 1239 | - | 0.569814 |
NA | STY1389 | oxidoreductase | chromosome | CDS | 1341794 | 714 | - | 0.570028 |
NA | STY1757 | hypothetical protein | chromosome | CDS | 1676481 | 393 | - | 0.582697 |
NA | STY3491 | hypothetical protein | chromosome | CDS | 3332682 | 783 | - | 0.578544 |
NA | STY4210 | hypothetical protein | chromosome | CDS | 4076233 | 759 | + | 0.627141 |
NA | STY2407 | FAA-hydrolase-family protein | chromosome | CDS | 2239215 | 702 | - | 0.54416 |
NA | STY0283 | hypothetical protein | chromosome | CDS | 299977 | 723 | + | 0.504841 |
NA | STY2408 | putative gentisate 1,2-dioxygenase | chromosome | CDS | 2239932 | 1038 | - | 0.568401 |
NA | STY3506 | hypothetical protein | chromosome | CDS | 3344134 | 654 | - | 0.568807 |
NA | STY3489 | possible exported protein | chromosome | CDS | 3331472 | 636 | - | 0.531447 |
NA | STY0948 | hypothetical protein | chromosome | CDS | 938216 | 678 | - | 0.536873 |
NA | STY1483 | N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 1436331 | 846 | + | 0.521277 |
NA | STY1333 | short chain dehydrogenase | chromosome | CDS | 1290578 | 762 | - | 0.566929 |
NA | STY4861 | hypothetical protein | chromosome | CDS | 4724051 | 666 | - | 0.537538 |
NA | HCM2.0016c | putative porphyrin biosynthetic protein | pHCM2 | CDS | 11783 | 1236 | - | 0.530744 |
NA | STY0554 | hypothetical protein | chromosome | CDS | 560346 | 2415 | + | 0.584265 |
NA | STY1433 | hypothetical protein | chromosome | CDS | 1384141 | 438 | - | 0.481735 |
NA | STY4665 | hypothetical protein | chromosome | CDS | 4527028 | 1590 | + | 0.476101 |
NA | STY4856 | hypothetical protein | chromosome | CDS | 4719101 | 1629 | - | 0.547575 |
NA | STY3490 | possible exported protein | chromosome | CDS | 3332126 | 552 | - | 0.514493 |
NA | STY2213 | hypothetical protein | chromosome | CDS | 2049689 | 327 | - | 0.412844 |
NA | STY1026 | putative methyltransferase | chromosome | CDS | 1018791 | 474 | + | 0.521097 |
NA | STY3330 | oxidoreductase | chromosome | CDS | 3174262 | 885 | + | 0.564972 |
NA | STY4649 | Putative methyltransferase | chromosome | CDS | 4508645 | 891 | + | 0.538721 |
acpP | STY1235 | acyl carrier protein | chromosome | CDS | 1189783 | 237 | + | 0.476793 |
bioC | STY0829 | biotin synthesis protein BioC | chromosome | CDS | 826944 | 756 | + | 0.601852 |
caiC | STY0081 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 82381 | 1554 | - | 0.51094 |
entA | STY0642 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 644039 | 756 | + | 0.589947 |
entB | STY0641 | isochorismatase | chromosome | CDS | 643182 | 858 | + | 0.55711 |
entC | STY0639 | isochorismate synthase | chromosome | CDS | 640379 | 1170 | + | 0.588889 |
entD | STY0627 | enterobactin synthetase component D | chromosome | CDS | 624926 | 705 | - | 0.561702 |
entE | STY0640 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 641555 | 1614 | + | 0.578686 |
entF | STY0631 | enterobactin synthetase component F | chromosome | CDS | 629581 | 3885 | + | 0.589447 |
eutK | STY2692 | ethanolamine utilization protein EutK | chromosome | CDS | 2525375 | 495 | - | 0.608081 |
eutN | STY2701 | putative ethanolamine utilization protein EutN | chromosome | CDS | 2535026 | 690 | - | 0.591304 |
fabB | STY2609 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2443641 | 1215 | - | 0.572839 |
fabF | STY1236 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1190105 | 1242 | + | 0.549919 |
fabG | STY1234 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1188893 | 735 | + | 0.502041 |
fadD | STY1948 | acyl-CoA synthase | chromosome | CDS | 1836823 | 1686 | - | 0.523132 |
hpaB | STY1131 | 4-hydroxyphenylacetate 3-monooxygenase | chromosome | CDS | 1096182 | 1308 | - | 0.534404 |
hpaG | STY1134 | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase [includes: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | chromosome | CDS | 1098310 | 1290 | + | 0.560465 |
hpcG | STY1139 | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase | chromosome | CDS | 1102448 | 804 | + | 0.589552 |
hutI | STY0820 | imidazolonepropionase | chromosome | CDS | 816437 | 1224 | + | 0.587418 |
kduD | STY3162 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3034527 | 762 | - | 0.518373 |
menE | STY2535 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2369264 | 1368 | - | 0.60307 |
menF | STY2541 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2374973 | 1296 | - | 0.568673 |
pduA | STY2243 | putative propanediol utilization protein PduA | chromosome | CDS | 2073423 | 285 | + | 0.536842 |
pduC | STY2245 | glycerol dehydratase large subunit | chromosome | CDS | 2074535 | 1665 | + | 0.568769 |
pduE | STY2247 | diol dehydratase small subunit | chromosome | CDS | 2076899 | 522 | + | 0.563218 |
pduJ | STY2250 | putative propanediol utilization protein PduJ | chromosome | CDS | 2079819 | 276 | + | 0.554348 |
pduK | STY2251 | putative propanediol utilization protein PduK | chromosome | CDS | 2080098 | 483 | + | 0.563147 |
pduL | STY2252 | hypothetical protein | chromosome | CDS | 2080580 | 633 | + | 0.584518 |
pduT | STY2259 | putative propanediol utilization protein PduT | chromosome | CDS | 2086868 | 555 | + | 0.581982 |
pduX | STY2263 | hypothetical protein | chromosome | CDS | 2089486 | 903 | + | 0.55814 |
pncA | STY1821 | pyrazinamidase/nicotinamidase | chromosome | CDS | 1741482 | 657 | + | 0.57382 |
rrmA | STY1964 | rRNA guanine-N1-methyltransferase | chromosome | CDS | 1854312 | 810 | - | 0.560494 |
sipF | STY3004 | acyl carrier protein | chromosome | CDS | 2876422 | 249 | - | 0.381526 |
slsA | STY4025 | hypothetical protein | chromosome | CDS | 3888370 | 681 | - | 0.527166 |
smtA | STY0993 | SmtA protein | chromosome | CDS | 987917 | 804 | + | 0.557214 |
srlD | STY2956 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 2833113 | 780 | + | 0.551282 |
sufI | STY3349 | SufI protein | chromosome | CDS | 3191970 | 1413 | - | 0.588818 |
tehB | STY1456 | tellurite resistance protein TehB | chromosome | CDS | 1406735 | 597 | + | 0.502513 |
yacK | STY0190 | possible multicopper oxidase precursor | chromosome | CDS | 198720 | 1611 | + | 0.562384 |
yafE | STY0280 | putative methyltransferase | chromosome | CDS | 296922 | 771 | + | 0.522698 |
ybbA | STY0553 | hypothetical ABC transporter ATP-binding protein | chromosome | CDS | 559663 | 687 | + | 0.586608 |
ybbO | STY0551 | short chain dehydrogenase | chromosome | CDS | 558153 | 771 | - | 0.551232 |
ybdB | STY0643 | hypothetical protein | chromosome | CDS | 644797 | 414 | + | 0.596618 |
yecD | STY2110 | putative hydrolase | chromosome | CDS | 1962167 | 567 | + | 0.560847 |
yfeF | STY2682 | short chain dehydrogenase | chromosome | CDS | 2516815 | 792 | - | 0.540404 |
yigI | STY3603 | hypothetical protein | chromosome | CDS | 3458035 | 468 | + | 0.568376 |
yjcS | STY2004 | putative hydrolase | chromosome | CDS | 1883242 | 1980 | - | 0.49596 |
yjhP | STY4650 | hypothetical protein | chromosome | CDS | 4509535 | 747 | + | 0.542169 |
yohF | STY2401 | oxidoreductase | chromosome | CDS | 2233585 | 762 | - | 0.547244 |
yojI | STY2489 | putative ABC transporter ATP-binding protein | chromosome | CDS | 2317713 | 1644 | - | 0.55292 |
ysgA | STY3592 | putative hydrolase | chromosome | CDS | 3444898 | 813 | + | 0.567036 |
Shigella boydii Sb227, Sb227 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SBO_1677 | hypothetical protein | chromosome | CDS | 1662978 | 1353 | - | 0.501109 |
NA | SBO_1444 | hypothetical protein | chromosome | CDS | 1422663 | 411 | + | 0.508516 |
NA | SBO_1166 | putative isomerase | chromosome | CDS | 1166249 | 660 | + | 0.518182 |
NA | SBO_3844 | putative enzyme | chromosome | CDS | 3868793 | 879 | - | 0.531286 |
NA | SBO_2463 | hypothetical protein | chromosome | CDS | 2453541 | 507 | - | 0.583826 |
NA | SBO_0952 | unknown protein encoded within prophage | chromosome | CDS | 983435 | 657 | + | 0.404871 |
NA | SBO_1869 | putative sensor-type regulator | chromosome | CDS | 1851863 | 1929 | - | 0.512701 |
NA | SBO_4241 | hypothetical protein | chromosome | CDS | 4296586 | 927 | + | 0.518878 |
NA | SBO_1190 | hypothetical protein | chromosome | CDS | 1185518 | 288 | + | 0.510417 |
NA | SBO_1428 | putative IS1 encoded protein | chromosome | CDS | 1404948 | 333 | - | 0.438438 |
acpP | SBO_1969 | acyl carrier protein | chromosome | CDS | 1943482 | 237 | - | 0.481013 |
bioC | SBO_0664 | BioC | chromosome | CDS | 677544 | 756 | + | 0.564815 |
cchA | SBO_2472 | detox protein | chromosome | CDS | 2460676 | 336 | - | 0.571429 |
cchB | SBO_2471 | detox protein | chromosome | CDS | 2460282 | 288 | - | 0.53125 |
entA | SBO_0457 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | chromosome | CDS | 477028 | 747 | + | 0.576975 |
entB | SBO_0456 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase | chromosome | CDS | 476171 | 858 | + | 0.551282 |
entC | SBO_0454 | isochorismate hydroxymutase 2, enterochelin biosynthesis | chromosome | CDS | 473362 | 1176 | + | 0.561224 |
entD | SBO_0443 | enterochelin synthetase, component D | chromosome | CDS | 457938 | 630 | - | 0.495238 |
entE | SBO_0455 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 474547 | 1611 | + | 0.563625 |
entF | SBO_0447 | ATP-dependent serine activating enzyme | chromosome | CDS | 462635 | 3882 | + | 0.562081 |
fabB | SBO_2360 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 2349335 | 1221 | - | 0.561835 |
fabF | SBO_1968 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1942153 | 1242 | - | 0.532206 |
fabG | SBO_1970 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1943929 | 735 | - | 0.514286 |
fadD | SBO_1283 | acyl-CoA synthetase | chromosome | CDS | 1271842 | 1686 | + | 0.511269 |
hcaA2 | SBO_2563 | small terminal subunit of phenylpropionate dioxygenase | chromosome | CDS | 2565598 | 519 | + | 0.520231 |
hcaB | SBO_2565 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | chromosome | CDS | 2566433 | 813 | + | 0.563346 |
hdhA | SBO_1517 | NAD-dependent 7alpha-hydroxysteroid dehydrogenase | chromosome | CDS | 1494183 | 768 | + | 0.47526 |
hpaB | SBO_4404 | 4-hydroxyphenylacetate 3-monooxygenase | chromosome | CDS | 4457553 | 1563 | - | 0.541267 |
hpaG | SBO_4412 | 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase | chromosome | CDS | 4466232 | 1290 | - | 0.556589 |
hpaH | SBO_4408 | 2-oxo-hept-3-ene-1,7-dioate hydratase | chromosome | CDS | 4462765 | 651 | - | 0.582181 |
iucA | SBO_4337 | siderophore biosynthesis protein | chromosome | CDS | 4386545 | 1782 | + | 0.537037 |
iucC | SBO_4339 | siderophore biosynthesis protein | chromosome | CDS | 4389274 | 1743 | + | 0.545611 |
iucD | SBO_4340 | lysine:N6-hydroxylase | chromosome | CDS | 4391013 | 1338 | + | 0.466368 |
kduD | SBO_2734 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2747547 | 762 | - | 0.520997 |
menE | SBO_2297 | o-succinylbenzoate-CoA ligase | chromosome | CDS | 2285818 | 1356 | - | 0.548673 |
menF | SBO_2302 | isochorismate hydroxymutase 2 | chromosome | CDS | 2291518 | 1071 | - | 0.537815 |
smtA | SBO_2209 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 2189492 | 786 | + | 0.516539 |
sorD | SBO_4048 | putative sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 4091055 | 807 | - | 0.505576 |
srlD | SBO_2813 | glucitol (sorbitol)-6-phosphate dehydrogenase | chromosome | CDS | 2823329 | 780 | - | 0.525641 |
sufI | SBO_2879 | suppressor of ftsI | chromosome | CDS | 2882056 | 1413 | - | 0.564048 |
tauD | SBO_0262 | taurine dioxygenase | chromosome | CDS | 276087 | 852 | + | 0.543427 |
tehB | SBO_1657 | tellurite resistance | chromosome | CDS | 1639923 | 594 | - | 0.452862 |
ucpA | SBO_2451 | putative oxidoreductase | chromosome | CDS | 2442181 | 858 | - | 0.537296 |
yacK | SBO_0112 | hypothetical protein | chromosome | CDS | 125437 | 1551 | + | 0.539007 |
yafE | SBO_0199 | putative biotin synthesis protein | chromosome | CDS | 217880 | 624 | + | 0.496795 |
yafS | SBO_0202 | hypothetical protein | chromosome | CDS | 220768 | 726 | + | 0.49449 |
ybbA | SBO_0396 | putative ATP-binding component of a transport system | chromosome | CDS | 413554 | 687 | + | 0.56623 |
ybbO | SBO_0395 | putative oxidoreductase | chromosome | CDS | 412161 | 810 | - | 0.539506 |
ybcY | SBO_1027 | hypothetical protein | chromosome | CDS | 1046279 | 432 | - | 0.405093 |
ybdB | SBO_0458 | hypothetical protein | chromosome | CDS | 477777 | 414 | + | 0.582126 |
ycaC | SBO_0986 | hypothetical protein | chromosome | CDS | 1008573 | 582 | - | 0.465636 |
yciK | SBO_1795 | putative oxidoreductase | chromosome | CDS | 1774591 | 759 | + | 0.523057 |
ydgB | SBO_1530 | putative oxidoreductase | chromosome | CDS | 1510504 | 723 | - | 0.51314 |
ydjB | SBO_1319 | hypothetical protein | chromosome | CDS | 1303184 | 660 | - | 0.521212 |
yebH | SBO_1235 | putative enzyme | chromosome | CDS | 1231468 | 810 | - | 0.518519 |
yecD | SBO_1192 | hypothetical protein | chromosome | CDS | 1187232 | 336 | + | 0.520833 |
yecO | SBO_1132 | hypothetical protein | chromosome | CDS | 1135566 | 744 | - | 0.502688 |
yecP | SBO_1131 | putative enzyme | chromosome | CDS | 1134598 | 972 | - | 0.522634 |
yeiN | SBO_2161 | hypothetical protein | chromosome | CDS | 2137924 | 891 | - | 0.501683 |
yghA | SBO_2997 | putative oxidoreductase | chromosome | CDS | 3000624 | 885 | + | 0.544633 |
yhbL | SBO_3173 | sigma cross-reacting protein 27A | chromosome | CDS | 3184669 | 663 | + | 0.524887 |
yhiQ | SBO_3495 | hypothetical protein | chromosome | CDS | 3487340 | 753 | - | 0.586985 |
yigI | SBO_3832 | hypothetical protein | chromosome | CDS | 3854364 | 480 | - | 0.522917 |
yjcS | SBO_4115 | hypothetical protein | chromosome | CDS | 4160426 | 1998 | - | 0.51952 |
yjgI | SBO_4198 | putative oxidoreductase | chromosome | CDS | 4248347 | 714 | + | 0.543417 |
yohF | SBO_1007 | putative oxidoreductase | chromosome | CDS | 1025466 | 762 | + | 0.553806 |
yojI | SBO_2096 | putative ATP-binding component of a transport system | chromosome | CDS | 2077005 | 1644 | + | 0.527981 |
yrbC | SBO_3190 | hypothetical protein | chromosome | CDS | 3197246 | 636 | + | 0.525157 |
yrbD | SBO_3189 | hypothetical protein | chromosome | CDS | 3196676 | 552 | + | 0.494565 |
yrbE | SBO_3188 | hypothetical protein | chromosome | CDS | 3195889 | 783 | + | 0.551724 |
Shigella dysenteriae Sd197, Sd197 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SDY_1212 | putative isomerase | chromosome | CDS | 1121164 | 660 | + | 0.525758 |
NA | SDY_1674 | hypothetical protein | chromosome | CDS | 1534642 | 411 | - | 0.510949 |
NA | SDY_3090 | hypothetical protein | chromosome | CDS | 2865287 | 1623 | - | 0.529883 |
NA | SDY_0420 | hypothetical protein | chromosome | CDS | 400936 | 1335 | - | 0.597004 |
NA | SDY_1239 | hypothetical protein | chromosome | CDS | 1145679 | 414 | - | 0.528986 |
NA | SDY_1154 | hypothetical protein | chromosome | CDS | 1073829 | 255 | + | 0.517647 |
NA | SDY_2636 | hypothetical protein | chromosome | CDS | 2428320 | 507 | - | 0.573964 |
NA | SDY_1237 | hypothetical protein | chromosome | CDS | 1144506 | 582 | - | 0.530928 |
NA | SDY_3629 | putative beta-ketoacyl-ACP synthase | chromosome | CDS | 3363131 | 1230 | + | 0.55122 |
NA | SDY_1779 | hypothetical protein | chromosome | CDS | 1618679 | 1758 | - | 0.508532 |
NA | SDY_1060 | hypothetical protein | chromosome | CDS | 996338 | 432 | + | 0.405093 |
NA | SDY_3913 | putative enzyme | chromosome | CDS | 3644050 | 870 | + | 0.532184 |
NA | SDY_1249 | hypothetical protein | chromosome | CDS | 1153779 | 432 | + | 0.511574 |
acp | SDY_P162 | Acp | pSD1_197 | CDS | 129030 | 237 | - | 0.299578 |
acpP | SDY_2056 | acyl carrier protein | chromosome | CDS | 1868138 | 237 | - | 0.481013 |
bioC | SDY_0829 | biotin biosynthesis protein | chromosome | CDS | 773471 | 756 | - | 0.564815 |
caiC | SDY_0059 | probable crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 55024 | 1569 | - | 0.506055 |
entA | SDY_0527 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | chromosome | CDS | 513759 | 747 | + | 0.575636 |
entB | SDY_0526 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase | chromosome | CDS | 512902 | 858 | + | 0.544289 |
entC | SDY_0524 | isochorismate hydroxymutase 2 | chromosome | CDS | 510093 | 1176 | + | 0.562075 |
entD | SDY_0511 | enterochelin synthetase, component D | chromosome | CDS | 493991 | 630 | - | 0.487302 |
entE | SDY_0525 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 511278 | 1611 | + | 0.559901 |
entF | SDY_0515 | ATP-dependent serine activating enzyme | chromosome | CDS | 498689 | 3882 | + | 0.561566 |
fabB | SDY_2522 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 2320477 | 1221 | - | 0.562654 |
fabF | SDY_2055 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1866811 | 1242 | - | 0.532206 |
fabG | SDY_2057 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1868585 | 735 | - | 0.512925 |
fadD | SDY_1709 | acyl-CoA synthetase | chromosome | CDS | 1561171 | 1686 | - | 0.513049 |
hdhA | SDY_1838 | NAD-dependent 7alpha-hydroxysteroid dehydrogenase | chromosome | CDS | 1674498 | 768 | - | 0.473958 |
menE | SDY_2456 | o-succinylbenzoate-CoA ligase | chromosome | CDS | 2256592 | 1356 | - | 0.561209 |
menF | SDY_2461 | isochorismate hydroxymutase 2, menaquinone biosynthesis | chromosome | CDS | 2262292 | 1071 | - | 0.533147 |
smtA | SDY_2337 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 2128881 | 786 | - | 0.517812 |
srlD | SDY_2902 | glucitol-6-phosphate dehydrogenase | chromosome | CDS | 2682458 | 780 | + | 0.528205 |
sufI | SDY_3220 | suppressor of ftsI | chromosome | CDS | 2983361 | 1413 | + | 0.562633 |
tauD | SDY_0502 | taurine dioxygenase | chromosome | CDS | 486961 | 852 | - | 0.538732 |
tehB | SDY_1747 | tellurite resistance protein | chromosome | CDS | 1591269 | 594 | - | 0.464646 |
ucpA | SDY_2622 | putative oxidoreductase | chromosome | CDS | 2416333 | 858 | - | 0.532634 |
yacK | SDY_0030 | hypothetical protein | chromosome | CDS | 27255 | 1551 | + | 0.539652 |
yafE | SDY_0229 | putative biotin synthesis protein | chromosome | CDS | 233151 | 564 | + | 0.469858 |
yafS | SDY_0232 | hypothetical protein | chromosome | CDS | 235963 | 741 | + | 0.489879 |
ybbA | SDY_0405 | putative ATP-binding component of a transport system | chromosome | CDS | 389100 | 687 | - | 0.567686 |
ybbO | SDY_0406 | putative oxidoreductase | chromosome | CDS | 390370 | 810 | + | 0.540741 |
ybdB | SDY_0528 | hypothetical protein | chromosome | CDS | 514508 | 414 | + | 0.582126 |
ycaC | SDY_2364 | hypothetical protein | chromosome | CDS | 2160996 | 456 | + | 0.453947 |
yciK | SDY_1341 | putative oxidoreductase | chromosome | CDS | 1238903 | 759 | - | 0.520422 |
ydgB | SDY_1547 | putative oxidoreductase | chromosome | CDS | 1414420 | 723 | - | 0.507607 |
ydjB | SDY_1505 | hypothetical protein | chromosome | CDS | 1377057 | 660 | - | 0.527273 |
yebH | SDY_1968 | putative enzyme | chromosome | CDS | 1790132 | 810 | - | 0.51358 |
yecO | SDY_1169 | hypothetical protein | chromosome | CDS | 1084147 | 744 | + | 0.505376 |
yecP | SDY_1170 | putative enzyme | chromosome | CDS | 1084887 | 972 | + | 0.514403 |
ygcW | SDY_2976 | putative oxidoreductase | chromosome | CDS | 2749916 | 786 | - | 0.452926 |
yghA | SDY_3069 | putative oxidoreductase | chromosome | CDS | 2846431 | 885 | - | 0.541243 |
yhbL | SDY_3390 | sigma cross-reacting protein 27A | chromosome | CDS | 3141055 | 663 | - | 0.520362 |
yhiQ | SDY_3565 | hypothetical protein | chromosome | CDS | 3300584 | 753 | + | 0.605578 |
yigI | SDY_3923 | hypothetical protein | chromosome | CDS | 3655557 | 486 | + | 0.520576 |
yjgI | SDY_4267 | putative oxidoreductase | chromosome | CDS | 3998900 | 714 | - | 0.542017 |
yohF | SDY_2151 | putative oxidoreductase | chromosome | CDS | 1949351 | 762 | + | 0.551181 |
yojI | SDY_0865 | putative ATP-binding component of a transport system | chromosome | CDS | 814416 | 1644 | + | 0.535888 |
yrbC | SDY_3373 | hypothetical protein | chromosome | CDS | 3128514 | 636 | - | 0.523585 |
yrbD | SDY_3374 | hypothetical protein | chromosome | CDS | 3129168 | 552 | - | 0.496377 |
yrbE | SDY_3375 | hypothetical protein | chromosome | CDS | 3129724 | 783 | - | 0.54917 |
Shigella flexneri 2a str. 2457T, 2457T | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | S1466 | hypothetical protein | chromosome | CDS | 1429960 | 1758 | + | 0.507964 |
NA | S0688 | hypothetical bacteriophage protein | chromosome | CDS | 696632 | 246 | - | 0.49187 |
NA | S1277 | hypothetical protein | chromosome | CDS | 1236262 | 810 | - | 0.545679 |
NA | S1848 | hypothetical protein | chromosome | CDS | 1785094 | 411 | - | 0.508516 |
NA | S2639 | hypothetical protein | chromosome | CDS | 2529298 | 501 | - | 0.576846 |
NA | S1084 | putative synthetase | chromosome | CDS | 1064463 | 735 | - | 0.557823 |
NA | S3224 | hypothetical protein | chromosome | CDS | 3110011 | 249 | + | 0.405622 |
NA | S1288 | putative sensor-type regulator | chromosome | CDS | 1247578 | 1929 | + | 0.513738 |
NA | S3222 | acyl-CoA synthase | chromosome | CDS | 3107379 | 1689 | + | 0.529307 |
NA | S1257 | putative isomerase | chromosome | CDS | 1214682 | 660 | + | 0.518182 |
NA | S3247 | hypothetical protein | chromosome | CDS | 3130957 | 411 | - | 0.513382 |
NA | S4169 | hypothetical protein | chromosome | CDS | 4072203 | 297 | + | 0.508417 |
acpP | S1178 | acyl carrier protein | chromosome | CDS | 1142224 | 237 | + | 0.481013 |
bioC | S0768 | biotin biosynthesis protein BioC | chromosome | CDS | 750506 | 756 | + | 0.562169 |
caiC | S0036 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 35187 | 1569 | - | 0.50733 |
entA | S0516 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 527806 | 747 | + | 0.575636 |
entB | S0515 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase | chromosome | CDS | 526949 | 858 | + | 0.550117 |
entD | S0501 | enterochelin synthetase, component D | chromosome | CDS | 508075 | 630 | - | 0.485714 |
entE | S0514 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 525325 | 1611 | + | 0.563004 |
entF | S0504 | ATP-dependent serine activating enzyme | chromosome | CDS | 512773 | 3846 | + | 0.565003 |
fabB | S2534 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2427944 | 1242 | - | 0.561192 |
fabF | S1179 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1142547 | 1242 | + | 0.533011 |
fabG | S4547 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 4452843 | 792 | + | 0.540404 |
fabG | S1177 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1141279 | 735 | + | 0.514286 |
fadD | S1538 | acyl-CoA synthase | chromosome | CDS | 1497407 | 1752 | + | 0.511986 |
hcaA2 | S2758 | small terminal subunit of phenylpropionate dioxygenase | chromosome | CDS | 2648830 | 519 | + | 0.527938 |
hcaB | S2760 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | chromosome | CDS | 2649665 | 813 | + | 0.560886 |
hpaG | S4654 | 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase | chromosome | CDS | 4547972 | 1290 | - | 0.55969 |
hpaH | S4650 | 2-oxo-hept-3-ene-1, 7-dioate hydratase | chromosome | CDS | 4544395 | 804 | - | 0.575871 |
iucA | S4056 | siderophore biosynthesis protein | chromosome | CDS | 3952684 | 1782 | - | 0.535915 |
iucC | S4054 | siderophore biosynthesis protein | chromosome | CDS | 3949994 | 1743 | - | 0.545611 |
iucD | S4053 | lysine:N6-hydroxylase | chromosome | CDS | 3948660 | 1338 | - | 0.46562 |
kduD | S3050 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2937539 | 762 | - | 0.519685 |
menE | S2473 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2365835 | 1356 | - | 0.561947 |
menF | S2478 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2371535 | 1071 | - | 0.538749 |
smtA | S0981 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 961291 | 786 | + | 0.513995 |
sorD | S3637 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 3519483 | 807 | + | 0.509294 |
srlD | S2919 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 2796045 | 780 | + | 0.530769 |
sufI | S3265 | suppressor of ftsI | chromosome | CDS | 3145361 | 1413 | - | 0.56334 |
tauD | S0271 | taurine dioxygenase | chromosome | CDS | 272006 | 852 | - | 0.545775 |
tehB | S1494 | Tellurite resistance protein TehB | chromosome | CDS | 1455972 | 594 | + | 0.459596 |
ucpA | S2627 | short chain dehydrogenase | chromosome | CDS | 2519269 | 792 | - | 0.54798 |
vpsA | S3453 | putative ATP-binding component of a transport system | chromosome | CDS | 3322554 | 810 | - | 0.54321 |
vpsB | S3452 | integral membrane protein | chromosome | CDS | 3321764 | 783 | - | 0.554278 |
vpsC | S3451 | cytoplasmic membrane protein | chromosome | CDS | 3321208 | 552 | - | 0.498188 |
yacK | S0122 | hypothetical protein | chromosome | CDS | 134820 | 1551 | + | 0.545455 |
yafE | S0204 | putative biotin synthesis protein | chromosome | CDS | 223972 | 621 | + | 0.492754 |
yafS | S0207 | hypothetical protein | chromosome | CDS | 226844 | 726 | + | 0.495868 |
ybbA | S0447 | putative ATP-binding component of a transport system | chromosome | CDS | 455853 | 687 | + | 0.56623 |
ybbO | S0445 | short chain dehydrogenase | chromosome | CDS | 454461 | 810 | - | 0.537037 |
ybdB | S0517 | hypothetical protein | chromosome | CDS | 528555 | 414 | + | 0.577295 |
ycaC | S0897 | hypothetical protein | chromosome | CDS | 891080 | 627 | - | 0.457735 |
yciK | S1358 | short chain dehydrogenase | chromosome | CDS | 1322505 | 759 | - | 0.524374 |
ydgB | S1759 | short chain dehydrogenase | chromosome | CDS | 1695251 | 723 | + | 0.50899 |
ydiD | S1647 | hypothetical protein | chromosome | CDS | 1600707 | 1701 | - | 0.496767 |
ydjB | S1570 | hypothetical protein | chromosome | CDS | 1528599 | 660 | - | 0.530303 |
yebH | S1519 | putative enzyme | chromosome | CDS | 1479386 | 810 | + | 0.518519 |
yecO | S2001 | hypothetical protein | chromosome | CDS | 1922862 | 744 | + | 0.505376 |
yecP | S2002 | putative enzyme | chromosome | CDS | 1923602 | 972 | + | 0.520576 |
yeiN | S2379 | hypothetical protein | chromosome | CDS | 2259308 | 939 | - | 0.492013 |
ygfF | S3087 | putative oxidoreductase | chromosome | CDS | 2971161 | 744 | - | 0.549731 |
yghA | S3251 | oxidoreductase | chromosome | CDS | 3133766 | 885 | + | 0.545763 |
yhbL | S3467 | sigma cross-reacting protein 27A (SCRP-27A) | chromosome | CDS | 3333090 | 654 | - | 0.527523 |
yhiQ | S4240 | hypothetical protein | chromosome | CDS | 4155030 | 753 | + | 0.590969 |
yigI | S3857 | hypothetical protein | chromosome | CDS | 3755454 | 486 | + | 0.524691 |
yjgI | S4503 | oxidoreductase | chromosome | CDS | 4405258 | 714 | + | 0.539216 |
yojI | S2425 | putative ATP-binding component of a transport system | chromosome | CDS | 2307815 | 1644 | - | 0.532847 |
yrbC | S3450 | hypothetical protein | chromosome | CDS | 3320554 | 636 | - | 0.52044 |
Shigella flexneri 2a str. 301, 301 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SF2021 | hypothetical protein | chromosome | CDS | 2045549 | 669 | + | 0.405082 |
NA | SF3021 | acyl-CoA synthase | chromosome | CDS | 3118716 | 1689 | + | 0.529307 |
NA | SF1808 | hypothetical protein | chromosome | CDS | 1844431 | 1758 | - | 0.507964 |
NA | SF1204 | putative sensor-type regulator | chromosome | CDS | 1247863 | 1929 | + | 0.513738 |
NA | SF3046 | hypothetical protein | chromosome | CDS | 3142294 | 411 | - | 0.513382 |
NA | SF2201 | hypothetical protein | chromosome | CDS | 2228275 | 669 | + | 0.405082 |
NA | SF1716 | hypothetical protein | chromosome | CDS | 1748137 | 411 | - | 0.508516 |
NA | SF1169 | putative isomerase | chromosome | CDS | 1211781 | 660 | + | 0.518182 |
NA | SF4375 | hypothetical protein | chromosome | CDS | 4547451 | 510 | - | 0.556863 |
NA | SF4374 | 4-hydroxyphenylacetate 3-monooxygenase large chain | chromosome | CDS | 4546402 | 1053 | - | 0.54321 |
NA | SF3908 | putative enzyme | chromosome | CDS | 4028494 | 882 | - | 0.531746 |
NA | SF1014 | putative synthetase | chromosome | CDS | 1060231 | 735 | - | 0.557823 |
NA | SF1644 | 7-alpha-hydroxysteroid dehydrogenase | chromosome | CDS | 1674136 | 621 | - | 0.454106 |
NA | SF2491 | hypothetical protein | chromosome | CDS | 2551164 | 501 | - | 0.576846 |
NA | SF3023 | hypothetical protein | chromosome | CDS | 3121348 | 249 | + | 0.405622 |
NA | SF1191 | hypothetical protein | chromosome | CDS | 1235208 | 810 | - | 0.544444 |
acp | CP0124 | Acp, putative acyl carrier protein | pCP301 | CDS | 106938 | 237 | - | 0.291139 |
acpP | SF1098 | acyl carrier protein | chromosome | CDS | 1139332 | 237 | + | 0.481013 |
bioC | SF0727 | biotin biosynthesis protein BioC | chromosome | CDS | 754349 | 756 | + | 0.562169 |
caiC | SF0034 | crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 35701 | 1569 | - | 0.50733 |
entA | SF0510 | 2,3-dihydroxybenzoate-2,3-dehydrogenase | chromosome | CDS | 531914 | 747 | + | 0.575636 |
entB | SF0509 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase | chromosome | CDS | 531057 | 858 | + | 0.551282 |
entD | SF0495 | enterochelin synthetase, component D | chromosome | CDS | 512184 | 630 | - | 0.485714 |
entE | SF0508 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 529433 | 1611 | + | 0.563004 |
entF | SF0498 | ATP-dependent serine activating enzyme | chromosome | CDS | 516881 | 3846 | + | 0.565003 |
fabB | SF2399 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2448487 | 1242 | - | 0.561192 |
fabF | SF1099 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1139654 | 1242 | + | 0.533011 |
fabG | SF4282 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 4460650 | 792 | + | 0.540404 |
fabG | SF1097 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1138387 | 735 | + | 0.514286 |
fadD | SF1423 | acyl-CoA synthase | chromosome | CDS | 1460476 | 1752 | + | 0.511986 |
hcaA2 | SF2586 | small terminal subunit of phenylpropionate dioxygenase | chromosome | CDS | 2655243 | 519 | + | 0.527938 |
hcaB | SF2588 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | chromosome | CDS | 2656078 | 813 | + | 0.560886 |
hpaG | SF4384 | 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase | chromosome | CDS | 4555819 | 1290 | - | 0.55969 |
hpaH | SF4380 | 2-oxo-hept-3-ene-1, 7-dioate hydratase | chromosome | CDS | 4552242 | 804 | - | 0.575871 |
iucA | SF3715 | siderophore biosynthesis protein | chromosome | CDS | 3820793 | 1782 | + | 0.535915 |
iucC | SF3717 | siderophore biosynthesis protein | chromosome | CDS | 3823522 | 1743 | + | 0.545611 |
iucD | SF3718 | lysine:N6-hydroxylase | chromosome | CDS | 3825261 | 1338 | + | 0.46562 |
kduD | SF2852 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2942858 | 762 | - | 0.519685 |
menE | SF2339 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2386378 | 1356 | - | 0.562684 |
menF | SF2344 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2392078 | 1071 | - | 0.538749 |
smtA | SF0917 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 957322 | 786 | + | 0.513995 |
sorD | SF4093 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 4251932 | 807 | - | 0.509294 |
srlD | SF2728 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 2801410 | 780 | + | 0.530769 |
sufI | SF3061 | suppressor of ftsI | chromosome | CDS | 3156698 | 1413 | - | 0.56334 |
tauD | SF0250 | taurine dioxygenase | chromosome | CDS | 269454 | 852 | - | 0.545775 |
tehB | SF1780 | tellurite resistance protein TehB | chromosome | CDS | 1817790 | 594 | - | 0.459596 |
ucpA | SF2480 | short chain dehydrogenase | chromosome | CDS | 2541136 | 792 | - | 0.54798 |
vpsA | SF3235 | putative ATP-binding component of a transport system | chromosome | CDS | 3331437 | 810 | - | 0.54321 |
vpsB | SF3234 | integral membrane protein | chromosome | CDS | 3330647 | 783 | - | 0.554278 |
vpsC | SF3233 | cytoplasmic membrane protein | chromosome | CDS | 3330091 | 552 | - | 0.498188 |
yacK | SF0119 | hypothetical protein | chromosome | CDS | 135334 | 1551 | + | 0.544165 |
yafE | SF0196 | putative biotin synthesis protein | chromosome | CDS | 224843 | 621 | + | 0.492754 |
yafS | SF0199 | hypothetical protein | chromosome | CDS | 227715 | 726 | + | 0.495868 |
ybbA | SF0439 | putative ATP-binding component of a transport system | chromosome | CDS | 456052 | 687 | + | 0.56623 |
ybbO | SF0438 | short chain dehydrogenase | chromosome | CDS | 454660 | 810 | - | 0.537037 |
ybbP | SF0441 | putative oxidoreductase | chromosome | CDS | 456735 | 2280 | + | 0.575 |
ybdB | SF0511 | hypothetical protein | chromosome | CDS | 532663 | 414 | + | 0.577295 |
ycaC | SF0856 | hypothetical protein | chromosome | CDS | 896266 | 627 | - | 0.457735 |
yciK | SF1273 | short chain dehydrogenase | chromosome | CDS | 1322638 | 759 | - | 0.524374 |
ydgB | SF1627 | short chain dehydrogenase | chromosome | CDS | 1655613 | 723 | + | 0.50899 |
ydiD | SF1529 | hypothetical protein | chromosome | CDS | 1562330 | 1701 | - | 0.496767 |
ydjB | SF1455 | hypothetical protein | chromosome | CDS | 1490225 | 660 | - | 0.530303 |
yebH | SF1404 | putative enzyme | chromosome | CDS | 1442460 | 810 | + | 0.518519 |
yecO | SF1911 | hypothetical protein | chromosome | CDS | 1946197 | 744 | + | 0.505376 |
yecP | SF1912 | putative enzyme | chromosome | CDS | 1946937 | 972 | + | 0.519547 |
yeiN | SF2250 | hypothetical protein | chromosome | CDS | 2279855 | 939 | - | 0.492013 |
ygfF | SF2888 | putative oxidoreductase | chromosome | CDS | 2979072 | 744 | - | 0.549731 |
yghA | SF3049 | oxidoreductase | chromosome | CDS | 3145103 | 885 | + | 0.545763 |
yhbL | SF3249 | sigma cross-reacting protein 27A (SCRP-27A) | chromosome | CDS | 3341973 | 654 | - | 0.527523 |
yhiQ | SF3528 | hypothetical protein | chromosome | CDS | 3618066 | 753 | - | 0.590969 |
yhiU | SF3599 | chromosome | pseudo | 3702719 | 297 | - | 0.508417 | |
yhiU | SF3599 | chromosome | pseudo | 3702719 | 297 | - | 0.508417 | |
yigI | SF3898 | hypothetical protein | chromosome | CDS | 4017372 | 486 | - | 0.524691 |
yjgI | SF4241 | oxidoreductase | chromosome | CDS | 4413064 | 714 | + | 0.539216 |
yojI | SF2295 | putative ATP-binding component of a transport system | chromosome | CDS | 2328358 | 1644 | - | 0.532847 |
yrbC | SF3232 | hypothetical protein | chromosome | CDS | 3329437 | 636 | - | 0.52044 |
Shigella flexneri 5 str. 8401, 8401 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SFV_1576 | putative enzyme | chromosome | CDS | 1611693 | 759 | + | 0.545455 |
NA | SFV_2020 | unknown protein encoded within prophage | chromosome | CDS | 2054224 | 657 | + | 0.407915 |
NA | SFV_2056 | hypothetical protein | chromosome | CDS | 2078139 | 498 | - | 0.475904 |
NA | SFV_1602 | hypothetical protein | chromosome | CDS | 1632725 | 801 | - | 0.505618 |
NA | SFV_1709 | hypothetical protein | chromosome | CDS | 1745116 | 411 | - | 0.508516 |
NA | SFV_2136 | hypothetical protein | chromosome | CDS | 2167588 | 495 | + | 0.565657 |
NA | SFV_3985 | hypothetical protein | chromosome | CDS | 4089067 | 297 | + | 0.508417 |
NA | SFV_1663 | hypothetical protein | chromosome | CDS | 1698797 | 867 | + | 0.499423 |
NA | SFV_1215 | putative sensor-type regulator | chromosome | CDS | 1260672 | 1842 | + | 0.513572 |
NA | SFV_2490 | hypothetical protein | chromosome | CDS | 2544866 | 501 | - | 0.576846 |
NA | SFV_4283 | hypothetical protein | chromosome | CDS | 4429130 | 897 | + | 0.522854 |
NA | SFV_1799 | hypothetical protein | chromosome | CDS | 1842502 | 1758 | - | 0.508532 |
NA | SFV_1206 | hypothetical protein | chromosome | CDS | 1250048 | 705 | - | 0.557447 |
NA | SFV_1187 | putative isomerase | chromosome | CDS | 1228463 | 660 | + | 0.516667 |
NA | SFV_2186 | unknown protein encoded within prophage | chromosome | CDS | 2218637 | 657 | + | 0.407915 |
acpP | SFV_1114 | acyl carrier protein | chromosome | CDS | 1157409 | 237 | + | 0.481013 |
acrA | SFV_0436 | acridine efflux pump | chromosome | CDS | 458608 | 1230 | - | 0.534959 |
acrB | SFV_0435 | acridine efflux pump | chromosome | CDS | 455436 | 3150 | - | 0.538095 |
acrD | SFV_2514 | Probable aminoglycoside efflux pump | chromosome | CDS | 2571467 | 3114 | + | 0.542068 |
bioC | SFV_0760 | Biotin synthesis protein bioC | chromosome | CDS | 790327 | 756 | + | 0.562169 |
caiC | SFV_0031 | probable crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 35274 | 1533 | - | 0.512068 |
dinF | SFV_4169 | DNA-damage-inducible protein F | chromosome | CDS | 4303146 | 1380 | - | 0.555797 |
entA | SFV_0544 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase | chromosome | CDS | 575278 | 747 | + | 0.576975 |
entB | SFV_0543 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase, isochroismatase | chromosome | CDS | 574421 | 858 | + | 0.552448 |
entD | SFV_0528 | enterochelin synthetase, component D | chromosome | CDS | 555499 | 771 | - | 0.491569 |
entE | SFV_0542 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 572797 | 1611 | + | 0.563004 |
entF | SFV_0532 | Enterobactin synthetase component F | chromosome | CDS | 560197 | 3894 | + | 0.564458 |
fabF | SFV_1115 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1157767 | 1206 | + | 0.531509 |
fabG | SFV_1113 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1156464 | 735 | + | 0.514286 |
fadD | SFV_1424 | acyl-CoA synthetase, long-chain-fatty-acid--CoA ligase | chromosome | CDS | 1471047 | 1719 | + | 0.513089 |
hcaB | SFV_2589 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | chromosome | CDS | 2651755 | 813 | + | 0.562116 |
hpaG | SFV_4384 | 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase | chromosome | CDS | 4522894 | 1290 | - | 0.560465 |
hpaH | SFV_4380 | 2-oxo-hept-3-ene-1,7-dioate hydratase | chromosome | CDS | 4519314 | 804 | - | 0.578358 |
iucA | SFV_3854 | siderophore biosynthesis protein | chromosome | CDS | 3954511 | 1725 | - | 0.543768 |
iucC | SFV_3852 | siderophore biosynthesis protein | chromosome | CDS | 3951821 | 1743 | - | 0.545611 |
iucD | SFV_3851 | lysine:N6-hydroxylase | chromosome | CDS | 3950487 | 1338 | - | 0.46562 |
kduD | SFV_2920 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2989821 | 762 | - | 0.519685 |
mdlA | SFV_0422 | ATP-binding component of a transport system | chromosome | CDS | 441615 | 1773 | + | 0.540891 |
menE | SFV_2331 | o-succinylbenzoate-CoA ligase | chromosome | CDS | 2380125 | 1356 | - | 0.562684 |
menF | SFV_2336 | isochorismate hydroxymutase 2 | chromosome | CDS | 2385825 | 1296 | - | 0.534722 |
sorD | SFV_4098 | putative sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 4224114 | 807 | - | 0.509294 |
srlD | SFV_2800 | glucitol (sorbitol)-6-phosphate dehydrogenase | chromosome | CDS | 2868509 | 780 | - | 0.530769 |
sufI | SFV_3066 | suppressor of ftsI | chromosome | CDS | 3130365 | 1413 | - | 0.564048 |
tauD | SFV_0332 | taurine dioxygenase, 2-oxoglutarate-dependent | chromosome | CDS | 350981 | 852 | + | 0.546948 |
tehB | SFV_1776 | tellurite resistance | chromosome | CDS | 1817124 | 594 | - | 0.459596 |
ucpA | SFV_2479 | putative oxidoreductase | chromosome | CDS | 2534838 | 792 | - | 0.54798 |
yacK | SFV_0113 | hypothetical protein | chromosome | CDS | 135004 | 1551 | + | 0.545455 |
yadG | SFV_0118 | putative ATP-binding component of a transport system | chromosome | CDS | 140620 | 852 | + | 0.491784 |
yafE | SFV_0194 | putative biotin synthesis protein | chromosome | CDS | 223904 | 771 | + | 0.494163 |
yafS | SFV_0197 | hypothetical protein | chromosome | CDS | 226941 | 723 | + | 0.495159 |
ybbO | SFV_0466 | putative oxidoreductase | chromosome | CDS | 492308 | 771 | - | 0.54345 |
ybdB | SFV_0545 | hypothetical protein | chromosome | CDS | 576027 | 414 | + | 0.582126 |
ycaC | SFV_0888 | hypothetical protein | chromosome | CDS | 930438 | 627 | - | 0.45614 |
yciK | SFV_1283 | putative oxidoreductase | chromosome | CDS | 1336569 | 759 | - | 0.525692 |
ydgB | SFV_1621 | putative oxidoreductase | chromosome | CDS | 1654721 | 723 | + | 0.50899 |
ydhE | SFV_1685 | putative transport protein | chromosome | CDS | 1722590 | 1374 | + | 0.532751 |
ydjB | SFV_1449 | hypothetical protein | chromosome | CDS | 1493291 | 642 | - | 0.534268 |
yebH | SFV_1406 | putative enzyme | chromosome | CDS | 1453000 | 810 | + | 0.518519 |
yecO | SFV_1906 | hypothetical protein | chromosome | CDS | 1951975 | 744 | + | 0.505376 |
yecP | SFV_1907 | putative enzyme | chromosome | CDS | 1952715 | 972 | + | 0.520576 |
yegN | SFV_2135 | hypothetical protein | chromosome | CDS | 2164960 | 2559 | + | 0.560375 |
yegO | SFV_2137 | hypothetical protein | chromosome | CDS | 2168083 | 3066 | + | 0.57045 |
yeiN | SFV_2240 | hypothetical protein | chromosome | CDS | 2273548 | 939 | - | 0.493078 |
yghA | SFV_3055 | putative oxidoreductase | chromosome | CDS | 3118811 | 885 | + | 0.545763 |
yhbL | SFV_3239 | sigma cross-reacting protein 27A (SCRP-27A) | chromosome | CDS | 3305630 | 654 | - | 0.527523 |
yhiH | SFV_3487 | Hypothetical ABC transporter ATP-binding protein yhiH | chromosome | CDS | 3551858 | 2736 | - | 0.566886 |
yhiQ | SFV_3509 | hypothetical protein | chromosome | CDS | 3578629 | 753 | - | 0.590969 |
yiaV | SFV_3948 | hypothetical protein | chromosome | CDS | 4051266 | 1137 | + | 0.506596 |
yibH | SFV_3940 | hypothetical protein | chromosome | CDS | 4042254 | 1086 | + | 0.519337 |
yigI | SFV_3678 | hypothetical protein | chromosome | CDS | 3765811 | 486 | + | 0.524691 |
yjcR | SFV_4129 | hypothetical protein | chromosome | CDS | 4258152 | 972 | + | 0.567901 |
yjgI | SFV_4245 | putative oxidoreductase | chromosome | CDS | 4381646 | 714 | + | 0.537815 |
yojI | SFV_2286 | putative ATP-binding component of a transport system | chromosome | CDS | 2322083 | 1644 | - | 0.534063 |
yrbC | SFV_3222 | hypothetical protein | chromosome | CDS | 3293094 | 636 | - | 0.52044 |
yrbD | SFV_3223 | hypothetical protein | chromosome | CDS | 3293748 | 552 | - | 0.498188 |
yrbE | SFV_3224 | hypothetical protein | chromosome | CDS | 3294304 | 783 | - | 0.554278 |
yrbF | SFV_3225 | putative ATP-binding component of a transport system | chromosome | CDS | 3295094 | 810 | - | 0.54321 |
ysgA | SFV_3668 | putative hydrolase | chromosome | CDS | 3754482 | 693 | + | 0.542569 |
Shigella sonnei Ss046, Ss046 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SSON_1662 | putative N-hydroxyarylamine O-acetyltransferase | chromosome | CDS | 1760735 | 846 | - | 0.518913 |
NA | SSON_1886 | unknown protein encoded within prophage | chromosome | CDS | 1985869 | 657 | + | 0.414003 |
NA | SSON_2178 | unknown protein encoded by prophage | chromosome | CDS | 2281713 | 432 | + | 0.409722 |
NA | SSON_1887 | putative bacteriophage tail protein | chromosome | CDS | 1987134 | 612 | + | 0.431373 |
NA | SSON_1030 | putative synthetase | chromosome | CDS | 1108871 | 735 | - | 0.559184 |
NA | SSON_2527 | hypothetical protein | chromosome | CDS | 2663984 | 507 | - | 0.579882 |
NA | SSON_1470 | hypothetical protein | chromosome | CDS | 1546340 | 411 | + | 0.508516 |
NA | SSON_1736 | hypothetical protein | chromosome | CDS | 1839495 | 1758 | - | 0.505119 |
acp | SSO_P086 | Acp | pSS_046 | CDS | 80158 | 237 | - | 0.295359 |
acpP | SSON_1114 | acyl carrier protein | chromosome | CDS | 1192906 | 237 | + | 0.481013 |
bioC | SSON_0756 | biotin biosynthesis protein | chromosome | CDS | 800608 | 756 | + | 0.564815 |
caiC | SSON_0043 | probable crotonobetaine/carnitine-CoA ligase | chromosome | CDS | 44336 | 1569 | - | 0.511791 |
cchA | SSON_2537 | detox protein | chromosome | CDS | 2674223 | 336 | - | 0.568452 |
cchB | SSON_2536 | detox protein | chromosome | CDS | 2673829 | 288 | - | 0.53125 |
entA | SSON_0547 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase, enterochelin biosynthesis | chromosome | CDS | 588082 | 747 | + | 0.575636 |
entB | SSON_0546 | 2,3-dihydro-2,3-dihydroxybenzoate synthetase | chromosome | CDS | 587225 | 858 | + | 0.55711 |
entC | SSON_0544 | isochorismate hydroxymutase 2 | chromosome | CDS | 584416 | 1176 | + | 0.562925 |
entD | SSON_0533 | enterochelin synthetase, component D | chromosome | CDS | 568904 | 630 | - | 0.466667 |
entE | SSON_0545 | 2,3-dihydroxybenzoate-AMP ligase | chromosome | CDS | 585601 | 1611 | + | 0.560521 |
entF | SSON_0537 | ATP-dependent serine activating enzyme | chromosome | CDS | 573602 | 3882 | + | 0.563627 |
fabB | SSON_2381 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 2512163 | 1221 | - | 0.562654 |
fabF | SSON_1115 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1193230 | 1242 | + | 0.533011 |
fabG | SSON_1113 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1191961 | 735 | + | 0.517007 |
fadD | SSON_1356 | acyl-CoA synthetase | chromosome | CDS | 1430364 | 1686 | + | 0.511862 |
hcaA2 | SSON_2621 | small terminal subunit of phenylpropionate dioxygenase | chromosome | CDS | 2773582 | 519 | + | 0.518304 |
hcaB | SSON_2623 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | chromosome | CDS | 2774417 | 813 | + | 0.562116 |
hdhA | SSON_1541 | NAD-dependent 7alpha-hydroxysteroid dehydrogenase, dehydroxylation of bile acids | chromosome | CDS | 1616635 | 768 | + | 0.484375 |
hpaB | SSON_4489 | 4-hydroxyphenylacetate 3-monooxygenase | chromosome | CDS | 4762425 | 1563 | - | 0.543826 |
hpaG | SSON_4499 | 5-oxo-1,2,5-tricarboxilic-3-penten acid decarboxilase/isomerase | chromosome | CDS | 4772375 | 1290 | - | 0.556589 |
hpaH | SSON_4495 | 2-oxo-hept-3-ene-1,7-dioate hydratase | chromosome | CDS | 4768755 | 804 | - | 0.585821 |
idnO | SSON_4451 | 5-keto-D-gluconate 5-reductase | chromosome | CDS | 4723050 | 765 | - | 0.494118 |
iucA | SSON_3601 | siderophore biosynthesis protein | chromosome | CDS | 3767550 | 1725 | + | 0.543768 |
iucC | SSON_3603 | siderophore biosynthesis protein | chromosome | CDS | 3770222 | 1743 | + | 0.545037 |
iucD | SSON_3604 | lysine:N6-hydroxylase | chromosome | CDS | 3771961 | 1338 | + | 0.467862 |
kduD | SSON_3002 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3154779 | 762 | - | 0.515748 |
menE | SSON_2321 | o-succinylbenzoate-CoA ligase | chromosome | CDS | 2449417 | 1422 | - | 0.554852 |
menF | SSON_2326 | isochorismate hydroxymutase 2 | chromosome | CDS | 2455183 | 1071 | - | 0.542484 |
mhpD | SSON_0329 | 2-keto-4-pentenoate hydratase | chromosome | CDS | 356486 | 816 | + | 0.556373 |
mhpF | SSON_0330 | acetaldehyde dehydrogenase | chromosome | CDS | 357298 | 951 | + | 0.547844 |
pduA | SSON_2058 | putative propanediol utilization protein: polyhedral bodies | chromosome | CDS | 2157020 | 285 | + | 0.526316 |
pduC | SSON_2060 | putative propanediol utilization protein: glycerol dehydratase large subunit | chromosome | CDS | 2158132 | 1665 | + | 0.511712 |
pduE | SSON_2062 | putative propanediol utilization protein: diol dehydratase small subunit | chromosome | CDS | 2160489 | 519 | + | 0.481696 |
pduJ | SSON_2065 | putative propanediol utilization protein: polyhedral bodies | chromosome | CDS | 2163209 | 276 | + | 0.528986 |
pduK | SSON_2066 | putative propanediol utilization protein: polyhedral bodies | chromosome | CDS | 2163508 | 423 | + | 0.555556 |
pduL | SSON_2067 | putative propanediol utilization protein | chromosome | CDS | 2163933 | 633 | + | 0.526066 |
pduN | SSON_2069 | putative propanediol utilization protein: polyhedral bodies | chromosome | CDS | 2165057 | 276 | + | 0.568841 |
pduT | SSON_2074 | putative propanediol utilization protein: polyhedral bodies | chromosome | CDS | 2170201 | 555 | + | 0.535135 |
smtA | SSON_0923 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 989244 | 786 | + | 0.517812 |
sorD | SSON_4198 | putative sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 4449884 | 807 | - | 0.51425 |
sufI | SSON_3159 | suppressor of ftsI | chromosome | CDS | 3317584 | 1413 | - | 0.564756 |
tauD | SSON_0346 | taurine dioxygenase, 2-oxoglutarate-dependent | chromosome | CDS | 371877 | 852 | + | 0.545775 |
tehB | SSON_1712 | tellurite resistance | chromosome | CDS | 1815669 | 594 | - | 0.454545 |
ucpA | SSON_2515 | putative oxidoreductase | chromosome | CDS | 2652770 | 858 | - | 0.539627 |
yacK | SSON_0131 | hypothetical protein | chromosome | CDS | 146214 | 1551 | + | 0.541586 |
yafE | SSON_0224 | putative biotin synthesis protein | chromosome | CDS | 248363 | 624 | + | 0.496795 |
yafS | SSON_0227 | hypothetical protein | chromosome | CDS | 251236 | 741 | + | 0.492578 |
ybbA | SSON_0483 | putative ATP-binding component of a transport system | chromosome | CDS | 512983 | 687 | + | 0.56623 |
ybbO | SSON_0482 | putative oxidoreductase | chromosome | CDS | 511590 | 810 | - | 0.538272 |
ybbP | SSON_0485 | putative oxidoreductase | chromosome | CDS | 513666 | 2415 | + | 0.575155 |
ybdB | SSON_0548 | hypothetical protein | chromosome | CDS | 588831 | 414 | + | 0.574879 |
ycaC | SSON_0898 | hypothetical protein | chromosome | CDS | 958825 | 627 | - | 0.457735 |
ycgM | SSON_1169 | putative isomerase | chromosome | CDS | 1248351 | 660 | + | 0.518182 |
yciK | SSON_1872 | putative oxidoreductase | chromosome | CDS | 1971200 | 759 | + | 0.527009 |
ydgB | SSON_1554 | putative oxidoreductase | chromosome | CDS | 1632975 | 723 | - | 0.517289 |
ydjB | SSON_1387 | hypothetical protein | chromosome | CDS | 1461011 | 660 | - | 0.524242 |
yebH | SSON_1338 | putative enzyme | chromosome | CDS | 1412278 | 810 | + | 0.511111 |
yecD | SSON_1274 | hypothetical protein | chromosome | CDS | 1349015 | 600 | - | 0.525 |
yecO | SSON_1250 | hypothetical protein | chromosome | CDS | 1326241 | 744 | - | 0.502688 |
yecP | SSON_1249 | putative enzyme | chromosome | CDS | 1325273 | 972 | - | 0.521605 |
yeiN | SSON_2221 | hypothetical protein | chromosome | CDS | 2330191 | 939 | - | 0.467519 |
ygfF | SSON_3055 | putative oxidoreductase | chromosome | CDS | 3214964 | 744 | - | 0.544355 |
yghA | SSON_3147 | putative oxidoreductase | chromosome | CDS | 3306100 | 885 | + | 0.546893 |
yghYX | SSON_3144 | Predicted hydrolase | chromosome | CDS | 3303291 | 927 | - | 0.514563 |
yhbL | SSON_3357 | sigma cross-reacting protein 27A (SCRP-27A) | chromosome | CDS | 3528880 | 663 | - | 0.526395 |
yhiQ | SSON_3732 | hypothetical protein | chromosome | CDS | 3913732 | 753 | - | 0.586985 |
yigI | SSON_3994 | hypothetical protein | chromosome | CDS | 4218323 | 486 | - | 0.526749 |
yjcS | SSON_4265 | hypothetical protein | chromosome | CDS | 4530044 | 1998 | - | 0.51952 |
yjgI | SSON_4429 | putative oxidoreductase | chromosome | CDS | 4699793 | 714 | - | 0.540616 |
yohF | SSON_2194 | putative oxidoreductase | chromosome | CDS | 2299442 | 762 | - | 0.553806 |
yojI | SSON_2269 | putative ATP-binding component of a transport system | chromosome | CDS | 2381166 | 1644 | - | 0.53528 |
yrbC | SSON_3340 | hypothetical protein | chromosome | CDS | 3516330 | 636 | - | 0.522013 |
yrbD | SSON_3341 | hypothetical protein | chromosome | CDS | 3516984 | 552 | - | 0.498188 |
yrbE | SSON_3342 | hypothetical protein | chromosome | CDS | 3517540 | 783 | - | 0.550447 |
ysgA | SSON_4005 | putative hydrolase | chromosome | CDS | 4232801 | 690 | - | 0.543478 |
Sodalis glossinidius str. morsitans, morsitans | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SG1061 | acyl carrier protein | chromosome | CDS | 1764096 | 237 | + | 0.455696 |
NA | SG0699 | putative ABC transporter ATP-binding protein | chromosome | CDS | 1178184 | 567 | + | 0.587302 |
NA | SG0208 | hypothetical protein | chromosome | CDS | 386926 | 636 | + | 0.573899 |
NA | SG1256 | putative isochorismatase | chromosome | CDS | 2117159 | 633 | - | 0.609795 |
NA | SG0205 | putative ABC transporter ATP-binding component | chromosome | CDS | 384656 | 810 | + | 0.581481 |
NA | SG0283 | putative oxidoreductase | chromosome | CDS | 507514 | 471 | - | 0.549894 |
NA | SG2339 | hypothetical protein | chromosome | CDS | 4016071 | 471 | + | 0.613588 |
NA | SG0284 | N-acylhomoserine lactone synthase | chromosome | CDS | 508464 | 630 | + | 0.433333 |
NA | SG0221 | sigma cross-reacting protein 27A (SCRP-27A) | chromosome | CDS | 405464 | 516 | + | 0.594961 |
NA | SG0590 | hypothetical protein | chromosome | CDS | 997903 | 729 | + | 0.56653 |
NA | SG1338 | putative isomerase | chromosome | CDS | 2219977 | 525 | + | 0.531429 |
NA | SG0752 | hypothetical protein | chromosome | CDS | 1254574 | 483 | + | 0.57971 |
NA | SG1884 | ethanolamine utilization protein EutN | chromosome | CDS | 3223056 | 273 | + | 0.512821 |
NA | SG1773 | putative gluconate 5-dehydrogenase | chromosome | CDS | 3027820 | 657 | + | 0.563166 |
NA | SG2219 | polyketide synthase | chromosome | CDS | 3855044 | 1059 | + | 0.516525 |
NA | SG0277 | putative cell division protein | chromosome | CDS | 500479 | 1422 | + | 0.599156 |
NA | SG0097 | hypothetical protein | chromosome | CDS | 154660 | 825 | + | 0.572121 |
NA | SG2120 | putative type II restriction enzyme | chromosome | CDS | 3666409 | 975 | + | 0.569231 |
NA | SG1062 | 3-oxoacyl-(acyl-carrier-protein) synthase II | chromosome | CDS | 1764414 | 1242 | + | 0.584541 |
NA | SG2369 | hypothetical protein | chromosome | CDS | 4068243 | 771 | - | 0.587549 |
NA | SG0905 | biotin synthesis protein BioC | chromosome | CDS | 1468833 | 780 | + | 0.629487 |
NA | SG0914 | hypothetical protein | chromosome | CDS | 1483193 | 858 | + | 0.544289 |
NA | SG1148 | hypothetical protein | chromosome | CDS | 1909731 | 825 | + | 0.572121 |
NA | SG1000 | putative S-adenosylmethionine-dependent methyltransferase | chromosome | CDS | 1645177 | 600 | + | 0.536667 |
NA | SG0206 | hypothetical protein | chromosome | CDS | 385474 | 783 | + | 0.586207 |
NA | SG0207 | hypothetical protein | chromosome | CDS | 386261 | 528 | + | 0.545455 |
NA | SG2126 | putative dehydrogenase | chromosome | CDS | 3690465 | 717 | - | 0.546722 |
NA | SGP1_0044 | achromobactin biosynthetic and transport gene acsD | pSG1 | CDS | 69804 | 1785 | - | 0.582073 |
NA | SG0625 | putative dehydrogenase | chromosome | CDS | 1068378 | 846 | - | 0.588652 |
NA | SG1623 | 3-oxoacyl-(acyl-carrier-protein) synthase I | chromosome | CDS | 2780070 | 1212 | - | 0.588284 |
NA | SG2133 | hydantoinase | chromosome | CDS | 3704944 | 1563 | - | 0.605886 |
NA | SGP1_0039 | achromobactin biosynthetic and transport gene acsA | pSG1 | CDS | 62774 | 1848 | - | 0.5671 |
NA | SGP2_0010 | putative hydantoinase | pSG2 | CDS | 13726 | 1554 | + | 0.356499 |
NA | SG1322 | putative methyltransferase | chromosome | CDS | 2201365 | 579 | + | 0.594128 |
NA | SG1060 | 3-oxoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1763207 | 735 | + | 0.522449 |
NA | SGP1_0041 | achromobactin biosynthetic and transport gene acsC | pSG1 | CDS | 65393 | 1821 | - | 0.56123 |
NA | SG1253 | hypothetical protein | chromosome | CDS | 2114940 | 744 | - | 0.534946 |
NA | SG1252 | hypothetical protein | chromosome | CDS | 2113972 | 972 | - | 0.588477 |
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
acpP | WGLp092 | hypothetical protein | chromosome | CDS | 99504 | 237 | + | 0.337553 |
bioC | WGLp455 | hypothetical protein | chromosome | CDS | 528358 | 762 | + | 0.251969 |
fabB | WGLp408 | hypothetical protein | chromosome | CDS | 470322 | 1224 | - | 0.300654 |
fabG | WGLp091 | hypothetical protein | chromosome | CDS | 98638 | 735 | + | 0.251701 |
Yersinia enterocolitica subsp. enterocolitica 8081, 8081 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | YE1959 | hypothetical protein | chromosome | CDS | 2138910 | 735 | - | 0.420408 |
NA | YE2642 | putative phosphopantetheinyl transferase | chromosome | CDS | 2859267 | 750 | - | 0.453333 |
NA | YE2860 | putative short chain dehydrogenase | chromosome | CDS | 3110994 | 747 | + | 0.481928 |
NA | YE0250 | putative carboxymethylenebutenolidase | chromosome | CDS | 287893 | 711 | - | 0.488045 |
NA | YE0898 | putative acyl carrier protein | chromosome | CDS | 1028539 | 258 | + | 0.383721 |
NA | YE0908 | putative beta-ketoacyl-[ACP] synthase | chromosome | CDS | 1037041 | 1176 | + | 0.506803 |
NA | YE1008 | hypothetical protein | chromosome | CDS | 1127808 | 756 | + | 0.48545 |
NA | YE1748 | putative ABC transporter (ATP-binding protein) | chromosome | CDS | 1944755 | 1719 | - | 0.473531 |
NA | YE4053 | hypothetical protein | chromosome | CDS | 4418851 | 759 | - | 0.546772 |
NA | YE1322 | putative RTX-family protein | chromosome | CDS | 1467937 | 6333 | + | 0.334912 |
NA | YE1999 | hemolysin transport protein | chromosome | CDS | 2182592 | 1395 | + | 0.477419 |
NA | YE3592 | isochorismatase family protein | chromosome | CDS | 3909060 | 528 | - | 0.445076 |
NA | YE0797 | hypothetical protein | chromosome | CDS | 922629 | 249 | + | 0.453815 |
NA | YE0536 | putative lipoprotein | chromosome | CDS | 608930 | 1083 | + | 0.493998 |
NA | YE0444 | multidrug efflux protein | chromosome | CDS | 516891 | 3126 | + | 0.50128 |
NA | YE2679 | putative sugar transporter | chromosome | CDS | 2905488 | 1398 | - | 0.486409 |
NA | YE2402 | hypothetical protein | chromosome | CDS | 2590582 | 972 | + | 0.518519 |
NA | YE0894 | putative O-methyltransferase | chromosome | CDS | 1025066 | 1110 | - | 0.41982 |
NA | YE2401 | hypothetical protein | chromosome | CDS | 2589884 | 702 | + | 0.485755 |
NA | YE2824 | hypothetical protein | chromosome | CDS | 3071142 | 1263 | + | 0.342043 |
NA | YE3596 | putative drug efflux protein | chromosome | CDS | 3915387 | 1203 | - | 0.506234 |
NA | YE3532 | hypothetical protein | chromosome | CDS | 3845878 | 1464 | - | 0.514344 |
NA | YE3530 | putative HlyD family secretion protein | chromosome | CDS | 3844419 | 1050 | - | 0.534286 |
NA | YE3176 | probable short-chain dehydrogenase | chromosome | CDS | 3447512 | 681 | - | 0.496329 |
NA | YE1151 | multidrug efflux protein | chromosome | CDS | 1289613 | 3132 | - | 0.496169 |
NA | YE2366 | putative fumarylacetoacetate hydrolase family protein | chromosome | CDS | 2555251 | 657 | - | 0.482496 |
NA | YE0791 | ABC transporter, ATP-binding component | chromosome | CDS | 913856 | 2151 | + | 0.498838 |
NA | YE0341 | putative dehydrogenase/reductase | chromosome | CDS | 406648 | 774 | - | 0.51938 |
NA | YE2892 | putative ABC transporter ATP-binding protein | chromosome | CDS | 3144202 | 1752 | + | 0.50742 |
NA | YE3193 | hypothetical protein | chromosome | CDS | 3470920 | 771 | - | 0.459144 |
NA | YE0795 | putative acyl-carrier-protein | chromosome | CDS | 920547 | 1251 | + | 0.531575 |
NA | YE0443 | multidrug efflux protein | chromosome | CDS | 515727 | 1161 | + | 0.518519 |
NA | YE1696 | putative ABC transport protein, ATP-binding component | chromosome | CDS | 1890125 | 1545 | - | 0.485437 |
NA | YE0792 | putative type I secretion protein | chromosome | CDS | 916006 | 1176 | + | 0.510204 |
NA | YE4052 | metalloprotease | chromosome | CDS | 4417247 | 1479 | + | 0.413117 |
NA | YE2000 | putative toxin transport protein | chromosome | CDS | 2183989 | 2133 | + | 0.477731 |
NA | YE1971 | probable membrane transport protein | chromosome | CDS | 2151310 | 1203 | + | 0.53616 |
NA | YE2163 | putative transport protein | chromosome | CDS | 2364118 | 1374 | + | 0.494905 |
NA | YE1576 | putative 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1776892 | 1275 | - | 0.512157 |
NA | YE1697 | hypothetical protein | chromosome | CDS | 1891740 | 711 | - | 0.457103 |
NA | YE1506 | hypothetical protein | chromosome | CDS | 1681290 | 888 | - | 0.400901 |
NA | YE1998 | putative RTX-family toxin transporter | chromosome | CDS | 2180469 | 2127 | + | 0.45275 |
NA | YE2204 | putative short chain dehydrogenase | chromosome | CDS | 2415176 | 762 | + | 0.505249 |
NA | YE1514 | putative HlyD family secretion protein | chromosome | CDS | 1691350 | 1116 | + | 0.469534 |
NA | YE1200 | putative HlyD family secretion protein | chromosome | CDS | 1339325 | 1209 | - | 0.502068 |
NA | YE0920 | hypothetical protein | chromosome | CDS | 1047443 | 720 | + | 0.491667 |
NA | YE0899 | putative acyl carrier protein | chromosome | CDS | 1028812 | 252 | + | 0.353175 |
NA | YE3595 | putative integral membrane efflux protein | chromosome | CDS | 3912249 | 3126 | - | 0.527191 |
NA | YE2069 | putative short chain dehydrogenease | chromosome | CDS | 2266718 | 741 | - | 0.504723 |
NA | YE3354 | putative oxidoreductase | chromosome | CDS | 3666293 | 750 | + | 0.492 |
NA | YE2398 | putative isochorismatase | chromosome | CDS | 2587549 | 597 | + | 0.514238 |
NA | YE2146 | putative hlyD-family protein | chromosome | CDS | 2345444 | 858 | + | 0.470862 |
NA | YE2891 | HlyD family secretion protein | chromosome | CDS | 3143202 | 987 | + | 0.516717 |
NA | YE4124 | Putative member of isochorismatase hydrolase family | chromosome | CDS | 4513765 | 1095 | + | 0.500457 |
NA | YE0128 | HlyD family secretion protein | chromosome | CDS | 145917 | 1233 | + | 0.472019 |
NA | YE0537 | putative multi-drug efflux protein | chromosome | CDS | 610012 | 3087 | + | 0.505993 |
NA | YE1949 | putative isochorismatase | chromosome | CDS | 2128354 | 693 | - | 0.52381 |
NA | YE0127 | ABC transporter protein | chromosome | CDS | 144005 | 1782 | + | 0.470258 |
NA | YE0798 | putative acyl-carrier-protein | chromosome | CDS | 922897 | 720 | + | 0.520833 |
NA | YE3629 | putative efflux system protein | chromosome | CDS | 3955284 | 1530 | + | 0.526797 |
NA | YE2966 | putative hemolysin | chromosome | CDS | 3227908 | 1452 | + | 0.359504 |
NA | YE1418 | putative O-methyltransferase | chromosome | CDS | 1590524 | 1032 | - | 0.438953 |
aas | YE3327 | Aas bifunctional protein | chromosome | CDS | 3636055 | 2157 | - | 0.511822 |
acpP | YE1636 | acyl carrier protein | chromosome | CDS | 1841393 | 237 | + | 0.421941 |
acpY | YE3533 | hypothetical protein | chromosome | CDS | 3847625 | 252 | - | 0.472222 |
acrA | YE3100 | multidrug efflux protein | chromosome | CDS | 3373045 | 1188 | + | 0.495791 |
acrB | YE3101 | multidrug efflux protein | chromosome | CDS | 3374249 | 3153 | + | 0.497304 |
bioC | YE2905 | biotin synthesis protein BioC | chromosome | CDS | 3157849 | 747 | - | 0.518072 |
budA | YE4016 | alpha-acetolactate decarboxylase | chromosome | CDS | 4372967 | 786 | + | 0.480916 |
ccmA | YE1263 | putative heme exporter protein A | chromosome | CDS | 1406645 | 627 | + | 0.499203 |
cydC | YE1521 | transport ATP-binding protein | chromosome | CDS | 1699549 | 1725 | - | 0.491594 |
cydD | YE1522 | transport ATP-binding protein | chromosome | CDS | 1701276 | 1767 | - | 0.482739 |
dhaR | YE0550 | glycerol metabolism operon regulatory protein | chromosome | CDS | 629026 | 1920 | - | 0.503125 |
emrA | YE3242 | multidrug resistance protein A | chromosome | CDS | 3535043 | 1173 | + | 0.492754 |
fabB | YE1287 | 3-oxoacyl-[acyl-carrier-protein] synthase I | chromosome | CDS | 1430569 | 1224 | + | 0.50817 |
fabF | YE1637 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1841724 | 1239 | + | 0.503632 |
fabF | YE0911 | 3-oxoacyl-[acyl-carrier-protein] synthase II | chromosome | CDS | 1039402 | 1248 | + | 0.511218 |
fabG | YE0910 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 1038674 | 732 | + | 0.487705 |
fabG | YE1635 | 3-oxoacyl-[acyl-carrier protein] reductase | chromosome | CDS | 1840505 | 735 | + | 0.502041 |
fadD | YE2375 | long-chain-fatty-acid-CoA ligase | chromosome | CDS | 2561645 | 1695 | - | 0.479646 |
gutD | YE1095 | sorbitol-6-phosphate 2-dehydrogenase | chromosome | CDS | 1225058 | 837 | - | 0.46595 |
hutI | YE2461 | imidazolonepropionase | chromosome | CDS | 2646387 | 1221 | + | 0.489762 |
idnO | YE1363 | gluconate 5-dehydrogenase | chromosome | CDS | 1517663 | 765 | - | 0.436601 |
irp4 | YE2620 | yersiniabactin biosynthetic protein YbtT | chromosome | CDS | 2837033 | 804 | + | 0.588308 |
irp5 | YE2621 | yersiniabactin siderophore biosynthetic protein | chromosome | CDS | 2837840 | 1578 | + | 0.584918 |
irp6 | YE2615 | lipoprotein inner membrane ABC-transporter | chromosome | CDS | 2817001 | 1803 | - | 0.566833 |
irp7 | YE2614 | inner membrane ABC-transporter YbtQ | chromosome | CDS | 2815212 | 1803 | - | 0.590128 |
kduD1 | YE1887 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2071104 | 762 | - | 0.492126 |
mdl | YE3121 | probable ATP transporter (ATP-binding protein) | chromosome | CDS | 3392827 | 1779 | - | 0.505902 |
mdl | YE3122 | probable ABC transporter (ATP-binding protein) | chromosome | CDS | 3394598 | 1767 | - | 0.488964 |
menE | YE1379 | putative O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 1538356 | 1239 | + | 0.540759 |
menF | YE1373 | menaquinone-specific isochorismate synthase | chromosome | CDS | 1532262 | 1359 | + | 0.491538 |
msbA | YE1543 | probable transport ATP-binding protein | chromosome | CDS | 1733187 | 1749 | + | 0.469411 |
nam | YE2262 | putative pyrazinamidase/nicotinamidase | chromosome | CDS | 2471842 | 654 | + | 0.469419 |
phnM | YE0471 | PhnM protein | chromosome | CDS | 546933 | 1149 | - | 0.534378 |
rrmA | YE1768 | rRNA (guanine-N1-)-methyltransferase | chromosome | CDS | 1959577 | 861 | + | 0.491289 |
ssiD | YE3945 | putative taurine dioxygenase | chromosome | CDS | 4286814 | 849 | - | 0.518257 |
sufI | YE3654 | putative cell division protein | chromosome | CDS | 3985062 | 1428 | - | 0.537115 |
tam | YE2842 | putative trans-aconitate methyltransferase | chromosome | CDS | 3090075 | 777 | + | 0.522523 |
tehB | YE2489 | putative tellurite resistance protein | chromosome | CDS | 2681392 | 870 | - | 0.409195 |
yacK | YE0712 | hypothetical protein | chromosome | CDS | 827646 | 1602 | + | 0.533084 |
yadG | YE0715 | putative ABC transporter, ATP-binding protein | chromosome | CDS | 830904 | 927 | + | 0.470334 |
ybbO | YE3056 | probable short-chain dehydrogenase | chromosome | CDS | 3321900 | 777 | + | 0.51094 |
yegM | YE1109 | putitive HlyD family secretion protein | chromosome | CDS | 1242703 | 1332 | - | 0.536036 |
yegN | YE1108 | AcrB/AcrD/AcrF family membrane protein | chromosome | CDS | 1239560 | 3144 | - | 0.541349 |
yegO | YE1107 | AcrB/AcrD/AcrF family membrane protein | chromosome | CDS | 1236489 | 3075 | - | 0.533984 |
yhcQ | YE3795 | putative HlyD family secretion protein | chromosome | CDS | 4138868 | 936 | - | 0.521368 |
Yersinia pestis Antiqua, Antiqua | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | YPA_0272 | putative siderophore biosynthesis protein IucC | chromosome | CDS | 316158 | 1749 | - | 0.539165 |
NA | YPA_1287 | yersiniabactin biosynthetic protein YbtU | chromosome | CDS | 1428452 | 1101 | - | 0.603996 |
NA | YPA_1060 | biotin synthesis protein BioC | chromosome | CDS | 1212201 | 804 | + | 0.538557 |
NA | YPA_2086 | 3-oxoacyl-(acyl-carrier-protein) synthase I | chromosome | CDS | 2340188 | 1224 | - | 0.495098 |
NA | YPA_0876 | putative phosphopantetheinyl transferase | chromosome | CDS | 1014367 | 741 | + | 0.468286 |
NA | YPA_1924 | 3-oxoacyl-(acyl-carrier-protein) synthase II | chromosome | CDS | 2158664 | 1242 | - | 0.492754 |
NA | YPA_1954 | N-acylhomoserine lactone synthase YpeI | chromosome | CDS | 2185941 | 645 | + | 0.368992 |
NA | YPA_1332 | putative tellurite resistance protein | chromosome | CDS | 1495527 | 888 | + | 0.45045 |
NA | YPA_0745 | putative short chain dehydrogenase | chromosome | CDS | 857544 | 747 | - | 0.420348 |
NA | YPA_1750 | hypothetical protein | chromosome | CDS | 1963754 | 417 | - | 0.53717 |
NA | YPA_0271 | putative siderophore biosynthesis protein IucD | chromosome | CDS | 314833 | 1329 | - | 0.535741 |
NA | YPA_3731 | hypothetical protein | chromosome | CDS | 4183527 | 624 | + | 0.482372 |
NA | YPA_1134 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase | chromosome | CDS | 1286655 | 765 | + | 0.482353 |
NA | YPA_1133 | hypothetical protein | chromosome | CDS | 1286026 | 633 | + | 0.515008 |
NA | YPA_3729 | hypothetical protein | chromosome | CDS | 4182170 | 783 | + | 0.50447 |
NA | YPA_3373 | putative siderophore biosysnthesis protein | chromosome | CDS | 3747326 | 1689 | + | 0.534636 |
NA | YPA_1375 | putative dehydrogenase | chromosome | CDS | 1550270 | 681 | - | 0.403818 |
NA | YPA_0654 | putative HlyD family secretion protein | chromosome | CDS | 740886 | 1113 | + | 0.490566 |
NA | YPA_3376 | hypothetical protein | chromosome | CDS | 3755874 | 1128 | + | 0.490248 |
NA | YPA_2559 | hypothetical protein | chromosome | CDS | 2851053 | 1764 | - | 0.521542 |
NA | YPA_0753 | putative short chain dehydrogenase | chromosome | CDS | 864762 | 789 | + | 0.395437 |
NA | YPA_0755 | putative acyl carrier protein | chromosome | CDS | 866115 | 249 | + | 0.337349 |
NA | YPA_0748 | putative beta-ketoacyl-(acyl-carrier-protein) synthase | chromosome | CDS | 860017 | 1284 | + | 0.433022 |
NA | YPA_3377 | putative thioesterase | chromosome | CDS | 3756994 | 765 | + | 0.486275 |
NA | YPA_2020 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2264934 | 1374 | - | 0.5131 |
NA | YPA_3801 | hypothetical protein | chromosome | CDS | 4274325 | 771 | - | 0.574578 |
NA | YPA_1794 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2009769 | 807 | + | 0.486989 |
NA | YPA_0719 | hypothetical protein | chromosome | CDS | 831274 | 1029 | - | 0.525753 |
NA | YPA_0558 | hypothetical protein | chromosome | CDS | 644659 | 720 | + | 0.466667 |
NA | YPA_2692 | short-chain dehydrogenase | chromosome | CDS | 2991338 | 681 | - | 0.503671 |
NA | YPA_0277 | hypothetical protein | chromosome | CDS | 322261 | 834 | - | 0.383693 |
NA | YPA_0280 | N-acylhomoserine lactone synthase YspI | chromosome | CDS | 326133 | 651 | - | 0.411674 |
NA | YPA_0237 | putative carboxymethylenebutenolidase | chromosome | CDS | 277490 | 873 | - | 0.498282 |
NA | YPA_0187 | hypothetical protein | chromosome | CDS | 223332 | 471 | - | 0.484076 |
NA | YPA_0663 | transport ATP-binding protein | chromosome | CDS | 751636 | 1767 | - | 0.506508 |
NA | YPA_1926 | 3-oxoacyl-(acyl-carrier protein) reductase | chromosome | CDS | 2160390 | 735 | - | 0.482993 |
NA | YPA_3369 | hypothetical protein | chromosome | CDS | 3735424 | 3414 | + | 0.463386 |
NA | YPA_0318 | putative virulence determinant | chromosome | CDS | 371331 | 9333 | + | 0.372228 |
NA | YPA_0696 | putative methyltransferase | chromosome | CDS | 797530 | 786 | + | 0.478372 |
NA | YPA_0824 | putative siderophore biosynthetic enzyme | chromosome | CDS | 952802 | 1299 | + | 0.431101 |
NA | YPA_2573 | putative permease | chromosome | CDS | 2865032 | 2430 | - | 0.546502 |
NA | YPA_1141 | 4-hydroxyphenylacetate 3-monooxygenase | chromosome | CDS | 1293287 | 1563 | + | 0.486884 |
NA | YPA_0431 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 501262 | 756 | - | 0.533069 |
NA | YPA_1186 | putative oxidoreductase | chromosome | CDS | 1337633 | 2067 | + | 0.520561 |
NA | YPA_3728 | putative ABC transporter ATP-binding protein | chromosome | CDS | 4181134 | 819 | + | 0.492063 |
NA | YPA_1286 | yersiniabactin biosynthetic protein YbtT | chromosome | CDS | 1427652 | 789 | - | 0.584284 |
NA | YPA_3118 | putative cell division protein | chromosome | CDS | 3457733 | 1425 | - | 0.524211 |
NA | YPA_0749 | putative beta-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 861293 | 747 | + | 0.432396 |
NA | YPA_1431 | hypothetical protein | chromosome | CDS | 1611523 | 972 | - | 0.52572 |
NA | YPA_2141 | putative fimbrial protein | chromosome | CDS | 2402215 | 1032 | + | 0.453488 |
NA | YPA_1432 | hypothetical protein | chromosome | CDS | 1612491 | 804 | - | 0.49005 |
NA | YPA_2576 | short-chain dehydrogenase | chromosome | CDS | 2869137 | 777 | + | 0.526384 |
NA | YPA_2574 | putative ABC transporter ATP-binding protein | chromosome | CDS | 2867458 | 687 | - | 0.521106 |
NA | YPA_1517 | putative pyrazinamidase/nicotinamidase | chromosome | CDS | 1701344 | 648 | - | 0.496914 |
NA | YPA_1374 | hypothetical protein | chromosome | CDS | 1549506 | 660 | - | 0.443939 |
NA | YPA_0722 | hypothetical protein | chromosome | CDS | 834133 | 375 | - | 0.506667 |
NA | YPA_3287 | putative taurine dioxygenase | chromosome | CDS | 3624305 | 849 | - | 0.510012 |
NA | YPA_3730 | hypothetical protein | chromosome | CDS | 4182957 | 558 | + | 0.480287 |
NA | YPA_2793 | putative dehydrogenase | chromosome | CDS | 3113522 | 771 | + | 0.499352 |
NA | YPA_1291 | lipoprotein inner membrane ABC-transporter | chromosome | CDS | 1446642 | 1713 | + | 0.578517 |
NA | YPA_0632 | hypothetical protein | chromosome | CDS | 720067 | 798 | + | 0.498747 |
NA | YPA_1610 | hypothetical protein | chromosome | CDS | 1798422 | 1002 | + | 0.479042 |
NA | YPA_1611 | putative ABC associated RTX toxin transporter, HlyD/MFP family | chromosome | CDS | 1799399 | 393 | + | 0.501272 |
NA | YPA_0102 | ABC transporter protein | chromosome | CDS | 121153 | 1818 | + | 0.490649 |
NA | YPA_2911 | hypothetical protein | chromosome | CDS | 3239350 | 1602 | - | 0.532459 |
NA | YPA_1354 | imidazolonepropionase | chromosome | CDS | 1524528 | 1221 | - | 0.502867 |
NA | YPA_3374 | putative siderophore biosysnthesis protein | chromosome | CDS | 3749027 | 5784 | + | 0.49101 |
NA | YPA_2709 | hypothetical protein | chromosome | CDS | 3013927 | 639 | - | 0.425665 |
NA | YPA_2031 | gluconate 5-dehydrogenase | chromosome | CDS | 2278364 | 870 | + | 0.441379 |
NA | YPA_0274 | siderophore biosynthesis protein, IucA familly | chromosome | CDS | 318837 | 1071 | - | 0.546219 |
NA | YPA_0826 | putative siderophore biosynthetic enzyme | chromosome | CDS | 954675 | 1845 | + | 0.469377 |
NA | YPA_1925 | acyl carrier protein | chromosome | CDS | 2160000 | 237 | - | 0.434599 |
NA | YPA_1138 | 2-oxo-hept-3-ene-1,7-dioate hydratase | chromosome | CDS | 1290206 | 804 | + | 0.50995 |
NA | YPA_1288 | yersiniabactin biosynthetic protein | chromosome | CDS | 1429549 | 9492 | - | 0.60788 |
NA | YPA_0862 | putative hydrolase | chromosome | CDS | 998080 | 843 | + | 0.5172 |
NA | YPA_3447 | hypothetical protein | chromosome | CDS | 3851816 | 2115 | + | 0.437352 |
NA | YPA_0861 | putative oxidoreductase | chromosome | CDS | 997292 | 741 | + | 0.535762 |
NA | YPA_3749 | enhancing lycopene biosynthesis protein 2 | chromosome | CDS | 4206017 | 654 | + | 0.457187 |
NA | YPA_1573 | putative short chain dehydrogenase | chromosome | CDS | 1760208 | 762 | - | 0.520997 |
NA | YPA_1285 | yersiniabactin siderophore biosynthetic protein | chromosome | CDS | 1426071 | 1578 | - | 0.588086 |
NA | YPA_2443 | hypothetical protein | chromosome | CDS | 2725562 | 747 | + | 0.496653 |
NA | YPA_2015 | putative O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2258943 | 1416 | - | 0.576977 |
NA | YPA_0275 | hypothetical protein | chromosome | CDS | 320000 | 609 | - | 0.504105 |
NA | YPA_1289 | yersiniabactin biosynthetic protein | chromosome | CDS | 1439128 | 6108 | - | 0.601506 |
NA | YPA_1122 | rRNA (guanine-N1-)-methyltransferase | chromosome | CDS | 1272054 | 840 | + | 0.485714 |
NA | YPA_1464 | putative fumarylacetoacetate hydrolase family protein | chromosome | CDS | 1646808 | 657 | + | 0.473364 |
NA | YPA_1003 | putative short chain oxidoreductase | chromosome | CDS | 1149825 | 816 | - | 0.58701 |
NA | YPA_1457 | long-chain-fatty-acid-CoA ligase | chromosome | CDS | 1639483 | 1722 | + | 0.482578 |
Yersinia pestis CO92, CO92 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | YPO1565 | putative oxidoreductase | chromosome | CDS | 1785362 | 741 | + | 0.535762 |
NA | YPO3199 | short chain dehydrogenase | chromosome | CDS | 3559660 | 681 | - | 0.503671 |
NA | YPO2814 | hypothetical protein | chromosome | CDS | 3144781 | 1764 | - | 0.520975 |
NA | YPO0777 | putative siderophore biosysnthesis protein | chromosome | CDS | 848635 | 1653 | - | 0.534785 |
NA | YPO0773 | putative thioesterase | chromosome | CDS | 839849 | 765 | - | 0.487582 |
NA | YPO3974 | hypothetical protein | chromosome | CDS | 4473845 | 771 | - | 0.574578 |
NA | YPO1992 | hypothetical protein | chromosome | CDS | 2264507 | 660 | - | 0.443939 |
NA | YPO3787 | putative carboxymethylenebutenolidase | chromosome | CDS | 4251211 | 804 | + | 0.493781 |
NA | YPO2950 | putative fimbrial protein | chromosome | CDS | 3296795 | 1032 | + | 0.453488 |
NA | YPO1949 | putative tellurite resistance protein | chromosome | CDS | 2210492 | 888 | + | 0.45045 |
NA | YPO3574 | hypothetical protein | chromosome | CDS | 3985614 | 783 | - | 0.50447 |
NA | YPO1452 | putative short chain dehydrogenase | chromosome | CDS | 1645639 | 747 | - | 0.420348 |
NA | YPO3835 | hypothetical protein | chromosome | CDS | 4303604 | 471 | + | 0.484076 |
NA | YPO1287 | putative short chain oxidoreductase | chromosome | CDS | 1445162 | 816 | - | 0.58701 |
NA | YPO3572 | hypothetical protein | chromosome | CDS | 3984416 | 624 | - | 0.482372 |
NA | YPO1456 | putative beta-ketoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1649388 | 747 | + | 0.432396 |
NA | YPO1080 | hypothetical protein | chromosome | CDS | 1227924 | 720 | + | 0.466667 |
NA | YPO3351 | short chain dehydrogenase | chromosome | CDS | 3737661 | 771 | - | 0.499352 |
NA | YPO0776 | putative siderophore biosysnthesis protein | chromosome | CDS | 842803 | 5820 | - | 0.492612 |
NA | YPO2082 | putative fumarylacetoacetate hydrolase family protein | chromosome | CDS | 2361784 | 657 | + | 0.473364 |
NA | YPO3081 | short chain dehydrogenase | chromosome | CDS | 3437472 | 777 | + | 0.526384 |
NA | YPO3575 | putative ABC transporter ATP-binding protein | chromosome | CDS | 3986614 | 819 | - | 0.492063 |
NA | YPO1532 | putative siderophore biosynthetic enzyme | chromosome | CDS | 1742758 | 1845 | + | 0.469377 |
NA | YPO1538 | putative siderophore biosynthetic enzyme | chromosome | CDS | 1751263 | 1815 | - | 0.426446 |
NA | YPO0778 | putative siderophore biosysnthesis protein | chromosome | CDS | 850331 | 6606 | - | 0.500757 |
NA | YPO2406 | hypothetical protein | chromosome | CDS | 2702351 | 417 | - | 0.53717 |
NA | YPO3973 | metalloprotease | chromosome | CDS | 4472443 | 1338 | + | 0.420777 |
NA | YPO2215 | short chain dehydrogenase | chromosome | CDS | 2488256 | 762 | - | 0.520997 |
NA | YPO1346 | hypothetical protein | chromosome | CDS | 1510239 | 789 | + | 0.500634 |
NA | YPO1462 | putative acyl carrier protein | chromosome | CDS | 1654210 | 249 | + | 0.337349 |
NA | YPO2050 | hypothetical protein | chromosome | CDS | 2328178 | 804 | - | 0.49005 |
NA | YPO0774 | hypothetical protein | chromosome | CDS | 840606 | 1128 | - | 0.490248 |
NA | YPO1993 | putative dehydrogenase | chromosome | CDS | 2265271 | 681 | - | 0.403818 |
NA | YPO0987 | hypothetical protein | chromosome | CDS | 1095052 | 834 | + | 0.383693 |
NA | YPO3078 | putative permease | chromosome | CDS | 3433367 | 2430 | - | 0.546502 |
NA | YPO1566 | putative hydrolase | chromosome | CDS | 1786150 | 843 | + | 0.5172 |
NA | YPO3218 | hypothetical protein | chromosome | CDS | 3582249 | 522 | - | 0.43295 |
NA | YPO3573 | hypothetical protein | chromosome | CDS | 3985052 | 558 | - | 0.480287 |
NA | YPO1811 | short chain dehydrogenase | chromosome | CDS | 2056525 | 2067 | + | 0.520561 |
NA | YPO2049 | hypothetical protein | chromosome | CDS | 2327210 | 972 | - | 0.52572 |
NA | YPO1455 | putative beta-ketoacyl-[acyl-carrier-protein] synthase | chromosome | CDS | 1648112 | 1284 | + | 0.433022 |
NA | YPO1460 | putative short chain dehydrogenase | chromosome | CDS | 1652857 | 789 | + | 0.395437 |
NA | YPO3079 | putative ABC transporter ATP-binding protein | chromosome | CDS | 3435793 | 687 | - | 0.521106 |
NA | YPO1580 | putative phosphopantetheinyl transferase | chromosome | CDS | 1802436 | 741 | + | 0.468286 |
NA | YPO3409 | hypothetical protein | chromosome | CDS | 3806901 | 1602 | - | 0.532459 |
NA | YPO0947 | putative virulence determinant | chromosome | CDS | 1037479 | 9333 | - | 0.372228 |
acpP | YPO1600 | acyl carrier protein | chromosome | CDS | 1824120 | 237 | + | 0.434599 |
alcA | YPO1530 | putative siderophore biosynthetic enzyme | chromosome | CDS | 1740885 | 1299 | + | 0.431101 |
bioC | YPO1153 | biotin synthesis protein BioC | chromosome | CDS | 1299245 | 804 | + | 0.538557 |
elbB | YPO3553 | enhancing lycopene biosynthesis protein 2 | chromosome | CDS | 3961893 | 654 | - | 0.457187 |
fabB | YPO2757 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 3089861 | 1224 | + | 0.495098 |
fabF | YPO1601 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1824451 | 1242 | + | 0.492754 |
fabG | YPO1599 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1823232 | 735 | + | 0.482993 |
fadD | YPO2074 | acyl-CoA synthase | chromosome | CDS | 2354492 | 1689 | + | 0.484902 |
hpaB | YPO1769 | 4-hydroxyphenylacetate 3-monooxygenase | chromosome | CDS | 2014131 | 1563 | + | 0.486884 |
hpaH | YPO1766 | 2-oxo-hept-3-ene-1,7-dioate hydratase | chromosome | CDS | 2011050 | 804 | + | 0.50995 |
hutI | YPO1972 | imidazolonepropionase | chromosome | CDS | 2239529 | 1221 | - | 0.502867 |
idnO | YPO2539 | gluconate 5-dehydrogenase | chromosome | CDS | 2851419 | 765 | + | 0.443137 |
irp1 | YPO1910 | yersiniabactin biosynthetic protein | chromosome | CDS | 2146470 | 9492 | - | 0.60788 |
irp2 | YPO1911 | yersiniabactin biosynthetic protein | chromosome | CDS | 2156049 | 6108 | - | 0.601506 |
iucC | YPO0992 | putative siderophore biosynthesis protein IucC | chromosome | CDS | 1100240 | 1749 | + | 0.539165 |
iucD | YPO0993 | putative siderophore biosynthesis protein IucD | chromosome | CDS | 1101985 | 1329 | + | 0.535741 |
kduD1 | YPO1724 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 1969761 | 762 | - | 0.488189 |
kduD2 | YPO0839 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 918783 | 756 | + | 0.533069 |
menE | YPO2523 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2831893 | 1416 | - | 0.576977 |
menF | YPO2528 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2837884 | 1368 | - | 0.512427 |
pncA | YPO2160 | putative pyrazinamidase/nicotinamidase | chromosome | CDS | 2429382 | 648 | - | 0.496914 |
rrmA | YPO1748 | rRNA (guanine-N1-)-methyltransferase | chromosome | CDS | 1990939 | 840 | + | 0.485714 |
smtA | YPO1402 | putative methyltransferase | chromosome | CDS | 1585713 | 786 | + | 0.478372 |
sufI | YPO0673 | putative cell division protein | chromosome | CDS | 734264 | 1425 | + | 0.524211 |
tauD | YPO0185 | putative taurine dioxygenase | chromosome | CDS | 203005 | 849 | + | 0.510012 |
ybtE | YPO1907 | yersiniabactin siderophore biosynthetic protein | chromosome | CDS | 2142992 | 1578 | - | 0.588086 |
ybtT | YPO1908 | yersiniabactin biosynthetic protein YbtT | chromosome | CDS | 2144573 | 804 | - | 0.583333 |
ybtU | YPO1909 | yersiniabactin biosynthetic protein YbtU | chromosome | CDS | 2145373 | 1101 | - | 0.603996 |
ypeI | YPO2456 | N-acylhomoserine lactone synthase YpeI | chromosome | CDS | 2754119 | 657 | + | 0.365297 |
yspI | YPO0984 | N-acylhomoserine lactone synthase YspI | chromosome | CDS | 1091363 | 651 | + | 0.411674 |
Yersinia pestis KIM, KIM | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | y0777 | hypothetical protein | chromosome | CDS | 869982 | 1674 | + | 0.528076 |
NA | y0970 | biotin synthesis protein | chromosome | CDS | 1095812 | 522 | + | 0.43295 |
NA | y2599 | isomerase | chromosome | CDS | 2862610 | 843 | - | 0.5172 |
NA | y2318 | hypothetical protein | chromosome | CDS | 2551685 | 660 | + | 0.443939 |
NA | y2709 | 3-oxoacyl-acyl carrier protein reductase | chromosome | CDS | 2993981 | 789 | - | 0.395437 |
NA | y0146 | ATP-binding component of ABC transport system | chromosome | CDS | 156378 | 819 | - | 0.492063 |
NA | y1533 | hypothetical protein | chromosome | CDS | 1696883 | 1032 | - | 0.453488 |
NA | y1100 | ATP-binding component of a transport system | chromosome | CDS | 1239286 | 687 | + | 0.521106 |
NA | y3096 | hypothetical protein | chromosome | CDS | 3406165 | 720 | - | 0.466667 |
NA | y3420 | thioesterase | chromosome | CDS | 3792240 | 768 | + | 0.488281 |
NA | y1645 | gluconate 5-dehydrogenase | chromosome | CDS | 1819141 | 726 | + | 0.451791 |
NA | y2261 | hypothetical protein | chromosome | CDS | 2490503 | 804 | + | 0.49005 |
NA | y3856 | hypothetical protein | chromosome | CDS | 4294468 | 771 | + | 0.574578 |
NA | y0144 | hypothetical protein | chromosome | CDS | 154816 | 573 | - | 0.481675 |
NA | y1118 | hypothetical protein | chromosome | CDS | 1254614 | 1764 | + | 0.521542 |
NA | y2561 | enzyme | chromosome | CDS | 2822979 | 840 | - | 0.485714 |
NA | y1101 | oxidoreductase | chromosome | CDS | 1239957 | 2442 | + | 0.547093 |
NA | y3406 | nonribosomal peptide synthetase/polyketide synthase | chromosome | CDS | 3770663 | 3414 | + | 0.463386 |
NA | y3411 | hypothetical protein | chromosome | CDS | 3782224 | 333 | + | 0.531532 |
NA | y2262 | enzyme | chromosome | CDS | 2491303 | 972 | + | 0.52572 |
NA | y3333 | hypothetical protein | chromosome | CDS | 3665557 | 9333 | - | 0.372228 |
NA | y1098 | short chain dehydrogenase | chromosome | CDS | 1237517 | 777 | - | 0.526384 |
NA | y2497 | short chain dehydrogenase | chromosome | CDS | 2758268 | 2067 | - | 0.520561 |
NA | y3412 | hypothetical protein | chromosome | CDS | 3782564 | 1689 | + | 0.534636 |
NA | y0839 | short chain dehydrogenase | chromosome | CDS | 940153 | 771 | + | 0.499352 |
NA | y0145 | hypothetical protein | chromosome | CDS | 155378 | 783 | - | 0.50447 |
NA | y1833 | hypothetical protein | chromosome | CDS | 2018116 | 732 | + | 0.464481 |
NA | y0143 | hypothetical protein | chromosome | CDS | 154180 | 624 | - | 0.482372 |
NA | y0125 | sigma cross-reacting protein 27A (SCRP-27A) | chromosome | CDS | 131666 | 654 | - | 0.457187 |
NA | y1933 | hypothetical protein | chromosome | CDS | 2131491 | 417 | + | 0.53717 |
NA | y3857 | secreted metalloprotease | chromosome | CDS | 4295303 | 1338 | - | 0.420777 |
NA | y2317 | oxidoreductase | chromosome | CDS | 2550900 | 681 | + | 0.403818 |
NA | y3377 | hypothetical protein | chromosome | CDS | 3723154 | 834 | + | 0.383693 |
NA | y2741 | hypothetical protein | chromosome | CDS | 3024987 | 411 | + | 0.491484 |
NA | y0984 | short chain dehydrogenase | chromosome | CDS | 1116142 | 681 | + | 0.503671 |
NA | y0395 | hypothetical protein | chromosome | CDS | 441615 | 471 | - | 0.484076 |
NA | y2836 | ABC transport protein | chromosome | CDS | 3138663 | 798 | - | 0.498747 |
NA | y2340 | imidazolonepropionase | chromosome | CDS | 2576019 | 1296 | + | 0.502315 |
NA | y2229 | isomerase | chromosome | CDS | 2457043 | 693 | - | 0.468975 |
NA | y2056 | short chain dehydrogenase | chromosome | CDS | 2264516 | 849 | - | 0.508834 |
NA | y3419 | hypothetical protein | chromosome | CDS | 3791123 | 1128 | + | 0.490248 |
NA | y0443 | carboxymethylenebutenolidase | chromosome | CDS | 493701 | 873 | - | 0.498282 |
NA | y2162 | hypothetical protein | chromosome | CDS | 2390163 | 648 | + | 0.496914 |
HMWP2 | y3410 | nonribosomal peptide synthetase | chromosome | CDS | 3775907 | 6405 | + | 0.498205 |
acpP | y1759 | acyl carrier protein | chromosome | CDS | 1941388 | 237 | + | 0.434599 |
bioC | y3029 | biotin biosynthesis protein | chromosome | CDS | 3336759 | 804 | - | 0.538557 |
fabB | y1591 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1758401 | 1224 | + | 0.495098 |
fabF | y2744 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 3027228 | 1029 | + | 0.525753 |
fabF | y2714 | beta-ketoacyl-acp synthase | chromosome | CDS | 2998231 | 1284 | - | 0.433022 |
fabF | y1760 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1941719 | 1242 | + | 0.492754 |
fabG | y2897 | 3-oxoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 3201746 | 816 | + | 0.58701 |
fabG | y2717 | 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase | chromosome | CDS | 3001241 | 747 | + | 0.420348 |
fabG | y2713 | 3-ketoacyl-acyl carrier protein reductase | chromosome | CDS | 2997492 | 792 | - | 0.433081 |
fabG | y1758 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 1940500 | 735 | + | 0.482993 |
fadD | y2236 | acyl-CoA synthase | chromosome | CDS | 2463303 | 1740 | - | 0.481609 |
hpaB | y2539 | component B of 4-hydroxyphenylacetic acid-hydroxylase | chromosome | CDS | 2801023 | 1563 | - | 0.486884 |
hpaH | y2542 | 2-oxo-hept-3-ene-1,7-dioate hydratase | chromosome | CDS | 2804863 | 804 | - | 0.50995 |
irp1 | y2400 | HMWP1 nonribosomal peptide/polyketide synthase | chromosome | CDS | 2660837 | 9492 | + | 0.60788 |
irp2 | y2399 | HMWP2 nonribosomal peptide synthetase | chromosome | CDS | 2654642 | 6108 | + | 0.601506 |
iucA1 | y3380 | aerobactin synthetase (subunit alpha) | chromosome | CDS | 3725640 | 609 | + | 0.504105 |
iucA2 | y3381 | aerobactin synthetase (subunit alpha) | chromosome | CDS | 3726341 | 1071 | + | 0.546219 |
iucC | y3383 | aerobactin synthetase (subunit beta) | chromosome | CDS | 3728342 | 1749 | + | 0.539165 |
iucD | y3384 | lysine : N6-hydroxylase | chromosome | CDS | 3730087 | 1329 | + | 0.535741 |
kduD | y3224 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3548806 | 756 | + | 0.533069 |
kduD | y1886 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2085066 | 807 | - | 0.486989 |
menE | y1664 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 1838811 | 1467 | + | 0.579414 |
menF | y1659 | menaquinone-specific isochorismate synthase | chromosome | CDS | 1832913 | 1374 | + | 0.5131 |
smtA | y2768 | S-adenosylmethionine-dependentmethyltransferase | chromosome | CDS | 3061232 | 792 | - | 0.478535 |
sufI | y3504 | suppressor of ftsI | chromosome | CDS | 3886844 | 1425 | - | 0.524211 |
tauD | y3966 | taurine dioxygenase | chromosome | CDS | 4424091 | 867 | + | 0.508651 |
tehB | y2361 | tellurite resistance | chromosome | CDS | 2605419 | 888 | - | 0.45045 |
ucpA | y2600 | oxidoreductase | chromosome | CDS | 2863500 | 741 | - | 0.535762 |
ybtD | y2584 | yersiniabactin biosynthesis component | chromosome | CDS | 2846453 | 657 | - | 0.461187 |
ybtE | y2403 | salicyl-AMP ligase | chromosome | CDS | 2672229 | 1578 | + | 0.588086 |
ybtT | y2402 | yersiniabactin thioesterase | chromosome | CDS | 2671569 | 657 | + | 0.578387 |
ybtU | y2401 | thiazolinyl-S-HMWP1 reductase | chromosome | CDS | 2670265 | 1161 | + | 0.601206 |
ypeI | y1733 | homoserine lactone synthase | chromosome | CDS | 1917056 | 657 | - | 0.365297 |
ysuG | y2638 | siderophore biosynthetic protein | chromosome | CDS | 2904979 | 1890 | - | 0.469841 |
ysuI | y2640 | siderophore biosynthetic protein | chromosome | CDS | 2907398 | 1299 | - | 0.431101 |
ytbI | y3374 | N-acylhomoserine lactone synthase | chromosome | CDS | 3719465 | 651 | + | 0.411674 |
Yersinia pestis Nepal516, Nepal516 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | YPN_2442 | siderophore biosynthetic enzyme | chromosome | CDS | 2731855 | 1815 | + | 0.426446 |
NA | YPN_2374 | rRNA (guanine-N1-)-methyltransferase | chromosome | CDS | 2658264 | 840 | - | 0.485714 |
NA | YPN_2516 | acyl carrier protein | chromosome | CDS | 2829232 | 249 | - | 0.337349 |
NA | YPN_2523 | beta-ketoacyl-(acyl-carrier-protein) synthase | chromosome | CDS | 2834295 | 1284 | - | 0.433022 |
NA | YPN_2518 | short-chain dehydrogenase | chromosome | CDS | 2830045 | 789 | - | 0.395437 |
NA | YPN_0129 | hypothetical protein | chromosome | CDS | 169637 | 471 | - | 0.484076 |
NA | YPN_2029 | acyl carrier protein | chromosome | CDS | 2292468 | 237 | - | 0.434599 |
NA | YPN_1720 | ABC associated RTX toxin transporter, HlyD/MFP family | chromosome | CDS | 1936222 | 393 | + | 0.501272 |
NA | YPN_3221 | hypothetical protein | chromosome | CDS | 3656620 | 3414 | - | 0.463386 |
NA | YPN_1526 | hypothetical protein | chromosome | CDS | 1735822 | 972 | - | 0.52572 |
NA | YPN_2526 | short-chain dehydrogenase | chromosome | CDS | 2837305 | 747 | + | 0.420348 |
NA | YPN_1860 | hypothetical protein | chromosome | CDS | 2100805 | 417 | - | 0.53717 |
NA | YPN_0531 | cell division protein | chromosome | CDS | 643801 | 1425 | + | 0.524211 |
NA | YPN_3622 | hypothetical protein | chromosome | CDS | 4149340 | 771 | - | 0.574578 |
NA | YPN_2848 | biotin synthesis protein BioC | chromosome | CDS | 3205808 | 804 | - | 0.538557 |
NA | YPN_2552 | hypothetical protein | chromosome | CDS | 2863293 | 1029 | + | 0.525753 |
NA | YPN_1719 | hypothetical protein | chromosome | CDS | 1935245 | 1002 | + | 0.479042 |
NA | YPN_1527 | hypothetical protein | chromosome | CDS | 1736790 | 804 | - | 0.49005 |
NA | YPN_3456 | membrane protein | chromosome | CDS | 3942181 | 783 | - | 0.50447 |
NA | YPN_2362 | hypothetical protein | chromosome | CDS | 2644499 | 633 | - | 0.515008 |
NA | YPN_2189 | 3-oxoacyl-(acyl-carrier-protein) synthase I | chromosome | CDS | 2474368 | 1224 | - | 0.495098 |
NA | YPN_2313 | oxidoreductase | chromosome | CDS | 2593395 | 2067 | - | 0.520561 |
NA | YPN_3436 | enhancing lycopene biosynthesis protein 2 | chromosome | CDS | 3918469 | 654 | - | 0.457187 |
NA | YPN_2030 | 3-oxoacyl-(acyl-carrier protein) reductase | chromosome | CDS | 2292858 | 735 | - | 0.482993 |
NA | YPN_3182 | N-acylhomoserine lactone synthase YspI | chromosome | CDS | 3587337 | 651 | + | 0.411674 |
NA | YPN_3218 | siderophore biosysnthesis protein | chromosome | CDS | 3648139 | 6651 | - | 0.500677 |
NA | YPN_1473 | dehydrogenase | chromosome | CDS | 1676556 | 681 | - | 0.403818 |
NA | YPN_0890 | short-chain dehydrogenase | chromosome | CDS | 1043282 | 681 | + | 0.503671 |
NA | YPN_2413 | hydrolase | chromosome | CDS | 2697940 | 843 | - | 0.5172 |
NA | YPN_1197 | hypothetical protein | chromosome | CDS | 1361349 | 747 | + | 0.496653 |
NA | YPN_3213 | thioesterase | chromosome | CDS | 3637688 | 765 | - | 0.487582 |
NA | YPN_2691 | short-chain oxidoreductase | chromosome | CDS | 3037754 | 816 | + | 0.58701 |
NA | YPN_2400 | phosphopantetheinyl transferase | chromosome | CDS | 2681756 | 741 | - | 0.468286 |
NA | YPN_2414 | oxidoreductase | chromosome | CDS | 2698830 | 741 | - | 0.535762 |
NA | YPN_2918 | hypothetical protein | chromosome | CDS | 3275232 | 720 | - | 0.466667 |
NA | YPN_3621 | metalloprotease | chromosome | CDS | 4147947 | 1329 | + | 0.421369 |
NA | YPN_0743 | dehydrogenase | chromosome | CDS | 869130 | 771 | + | 0.499352 |
NA | YPN_3187 | hypothetical protein | chromosome | CDS | 3593512 | 609 | + | 0.504105 |
NA | YPN_2134 | gluconate 5-dehydrogenase | chromosome | CDS | 2413098 | 870 | + | 0.441379 |
NA | YPN_1472 | hypothetical protein | chromosome | CDS | 1675792 | 660 | - | 0.443939 |
NA | YPN_1906 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2148163 | 807 | + | 0.486989 |
NA | YPN_3455 | membrane protein | chromosome | CDS | 3941619 | 558 | - | 0.480287 |
NA | YPN_2817 | ATPase | chromosome | CDS | 3171748 | 1743 | + | 0.512335 |
NA | YPN_2123 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2399668 | 1374 | - | 0.5131 |
NA | YPN_1452 | imidazolonepropionase | chromosome | CDS | 1650826 | 1221 | - | 0.502867 |
NA | YPN_1430 | fimbrial protein | chromosome | CDS | 1626806 | 1032 | - | 0.453488 |
NA | YPN_3144 | virulence determinant | chromosome | CDS | 3533384 | 9333 | - | 0.372228 |
NA | YPN_1011 | permease | chromosome | CDS | 1169143 | 2430 | + | 0.546502 |
NA | YPN_2361 | 5-carboxymethyl-2-hydroxymuconate delta-isomerase | chromosome | CDS | 2643732 | 771 | - | 0.481193 |
NA | YPN_3188 | siderophore biosynthesis protein, IucA familly | chromosome | CDS | 3594213 | 1071 | + | 0.546219 |
NA | YPN_1027 | hypothetical protein | chromosome | CDS | 1184498 | 1764 | + | 0.521542 |
NA | YPN_2357 | 2-oxo-hept-3-ene-1,7-dioate hydratase | chromosome | CDS | 2640142 | 804 | - | 0.50995 |
NA | YPN_1626 | pyrazinamidase/nicotinamidase | chromosome | CDS | 1837996 | 648 | - | 0.496914 |
NA | YPN_3217 | siderophore biosysnthesis protein | chromosome | CDS | 3646443 | 1689 | - | 0.534636 |
NA | YPN_3190 | siderophore biosynthesis protein IucC | chromosome | CDS | 3596214 | 1749 | + | 0.539165 |
NA | YPN_2052 | N-acylhomoserine lactone synthase YpeI | chromosome | CDS | 2316392 | 645 | + | 0.368992 |
NA | YPN_0177 | carboxymethylenebutenolidase | chromosome | CDS | 221683 | 873 | - | 0.498282 |
NA | YPN_2549 | hypothetical protein | chromosome | CDS | 2861088 | 375 | + | 0.506667 |
NA | YPN_0679 | hypothetical protein | chromosome | CDS | 798990 | 1602 | + | 0.532459 |
NA | YPN_1010 | ABC transporter ATP-binding protein | chromosome | CDS | 1168460 | 687 | + | 0.521106 |
NA | YPN_0876 | hypothetical protein | chromosome | CDS | 1022694 | 639 | + | 0.425665 |
NA | YPN_3041 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3416645 | 756 | + | 0.533069 |
NA | YPN_3457 | ABC transporter ATP-binding protein | chromosome | CDS | 3943181 | 819 | - | 0.492063 |
NA | YPN_2028 | 3-oxoacyl-(acyl-carrier-protein) synthase II | chromosome | CDS | 2291132 | 1242 | - | 0.492754 |
NA | YPN_3185 | hypothetical protein | chromosome | CDS | 3591026 | 834 | + | 0.383693 |
NA | YPN_2118 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2393677 | 1416 | - | 0.576977 |
NA | YPN_3454 | hypothetical protein | chromosome | CDS | 3940983 | 624 | - | 0.482372 |
NA | YPN_3882 | taurine dioxygenase | chromosome | CDS | 4416400 | 849 | - | 0.510012 |
NA | YPN_2522 | beta-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 2833556 | 747 | - | 0.432396 |
NA | YPN_2607 | transport ATP-binding protein | chromosome | CDS | 2942142 | 1767 | + | 0.506508 |
NA | YPN_2638 | hypothetical protein | chromosome | CDS | 2974680 | 798 | - | 0.498747 |
NA | YPN_1551 | long-chain-fatty-acid-CoA ligase | chromosome | CDS | 1763071 | 1722 | + | 0.482578 |
NA | YPN_2996 | Aas bifunctional protein | chromosome | CDS | 3367035 | 1959 | - | 0.519142 |
NA | YPN_3214 | hypothetical protein | chromosome | CDS | 3638445 | 1128 | - | 0.490248 |
NA | YPN_3191 | siderophore biosynthesis protein IucD | chromosome | CDS | 3597959 | 1329 | + | 0.535741 |
NA | YPN_2450 | siderophore biosynthetic enzyme | chromosome | CDS | 2742749 | 1299 | - | 0.431101 |
NA | YPN_1558 | fumarylacetoacetate hydrolase family protein | chromosome | CDS | 1770396 | 657 | + | 0.473364 |
NA | YPN_1008 | short-chain dehydrogenase | chromosome | CDS | 1166691 | 777 | - | 0.526384 |
NA | YPN_2448 | siderophore biosynthetic enzyme | chromosome | CDS | 2740330 | 1845 | - | 0.469377 |
NA | YPN_2354 | 4-hydroxyphenylacetate 3-monooxygenase | chromosome | CDS | 2636302 | 1563 | - | 0.486884 |
NA | YPN_1682 | short-chain dehydrogenase | chromosome | CDS | 1896903 | 762 | - | 0.520997 |
NA | YPN_2575 | methyltransferase | chromosome | CDS | 2897252 | 786 | - | 0.478372 |
NA | YPN_2616 | HlyD family secretion protein | chromosome | CDS | 2953547 | 1113 | - | 0.490566 |
NA | YPN_1718 | ABC RTX toxin transporter, fused ATP-binding/permease domains | chromosome | CDS | 1934894 | 327 | + | 0.477064 |
Yersinia pestis biovar Microtus str. 91001, 91001 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | YP_1582 | short chain dehydrogenase | chromosome | CDS | 1730741 | 2073 | - | 0.520984 |
NA | YP_3335 | metalloprotease | chromosome | CDS | 3731235 | 1338 | + | 0.420777 |
NA | YP_3262 | putative carboxymethylenebutenolidase | chromosome | CDS | 3637531 | 873 | - | 0.498282 |
NA | YP_2577 | putative fimbrial protein | chromosome | CDS | 2856168 | 1032 | + | 0.453488 |
NA | YP_3827 | hypothetical protein | chromosome | CDS | 4355914 | 624 | - | 0.482372 |
NA | YP_3830 | putative ABC transporter ATP-binding protein | chromosome | CDS | 4358112 | 819 | - | 0.492063 |
NA | YP_3494 | putative virulence determinant | chromosome | CDS | 3972453 | 9333 | + | 0.372335 |
NA | YP_3829 | hypothetical protein | chromosome | CDS | 4357112 | 783 | - | 0.50447 |
NA | YP_1427 | putative siderophore biosynthetic enzyme | chromosome | CDS | 1578174 | 1815 | - | 0.426446 |
NA | YP_3452 | hypothetical protein | chromosome | CDS | 3923357 | 834 | - | 0.383693 |
NA | YP_3427 | hypothetical protein | chromosome | CDS | 3876832 | 1128 | + | 0.490248 |
NA | YP_0846 | putative permease | chromosome | CDS | 917790 | 2442 | + | 0.547093 |
NA | YP_3828 | hypothetical protein | chromosome | CDS | 4356550 | 573 | - | 0.47993 |
acpP1 | YP_1354 | putative acyl carrier protein | chromosome | CDS | 1483121 | 249 | + | 0.337349 |
acpP3 | YP_2254 | acyl carrier protein | chromosome | CDS | 2501439 | 237 | - | 0.434599 |
alcA | YP_1419 | putative siderophore biosynthetic enzyme | chromosome | CDS | 1567796 | 1299 | + | 0.431101 |
bioC | YP_1007 | biotin synthesis protein BioC | chromosome | CDS | 1084838 | 804 | - | 0.538557 |
caiC | YP_2334 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 2595988 | 1416 | - | 0.576977 |
elbB | YP_3807 | enhancing lycopene biosynthesis protein 2 | chromosome | CDS | 4333400 | 654 | - | 0.457187 |
entF1 | YP_3423 | putative siderophore biosysnthesis protein | chromosome | CDS | 3858296 | 9936 | + | 0.488124 |
entF2 | YP_3424 | putative siderophore biosysnthesis protein | chromosome | CDS | 3868275 | 1653 | + | 0.534785 |
entF3 | YP_3425 | putative siderophore biosysnthesis protein | chromosome | CDS | 3869940 | 5829 | + | 0.492023 |
fabB | YP_2406 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2675321 | 1200 | - | 0.495833 |
fabF2 | YP_1167 | chromosome | pseudo | 1255568 | 1029 | + | 0.525753 | |
fabF3 | YP_1347 | putative beta-ketoacyl-[acyl-carrier-protein] synthase | chromosome | CDS | 1477023 | 1284 | + | 0.433022 |
fabF4 | YP_2253 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2500103 | 1242 | - | 0.492754 |
fabG | YP_2255 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 2501829 | 735 | - | 0.482993 |
fabG1 | YP_0336 | short chain dehydrogenase | chromosome | CDS | 352779 | 771 | + | 0.499352 |
fabG2 | YP_0733 | short chain dehydrogenase | chromosome | CDS | 795878 | 681 | + | 0.503671 |
fabG3 | YP_0843 | short chain dehydrogenase | chromosome | CDS | 915350 | 777 | - | 0.526384 |
fabG4 | YP_1304 | putative short chain oxidoreductase | chromosome | CDS | 1428130 | 816 | + | 0.58701 |
fabG5 | YP_1344 | putative short chain dehydrogenase | chromosome | CDS | 1474550 | 747 | - | 0.420348 |
fabG6 | YP_1348 | putative beta-ketoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1478254 | 792 | + | 0.433081 |
fabG7 | YP_1352 | putative short chain dehydrogenase | chromosome | CDS | 1481768 | 789 | + | 0.395437 |
fabG8 | YP_1840 | putative dehydrogenase | chromosome | CDS | 2050366 | 681 | - | 0.403818 |
fabG9 | YP_2012 | short chain dehydrogenase | chromosome | CDS | 2234114 | 849 | - | 0.508834 |
fadD | YP_1917 | acyl-CoA synthase | chromosome | CDS | 2136325 | 1740 | + | 0.481609 |
grsT | YP_3428 | putative thioesterase | chromosome | CDS | 3877949 | 768 | + | 0.488281 |
hpaB | YP_1624 | 4-hydroxyphenylacetate 3-monooxygenase | chromosome | CDS | 1773368 | 1563 | - | 0.486884 |
hpaH | YP_1627 | 2-oxo-hept-3-ene-1,7-dioate hydratase | chromosome | CDS | 1777208 | 804 | - | 0.50995 |
hutI | YP_1714 | imidazolonepropionase | chromosome | CDS | 1895670 | 1221 | - | 0.502867 |
idnO | YP_2350 | gluconate 5-dehydrogenase | chromosome | CDS | 2615393 | 870 | + | 0.441379 |
irp1 | YP_1653 | yersiniabactin biosynthetic protein | chromosome | CDS | 1803214 | 9492 | - | 0.60767 |
irp2 | YP_1654 | yersiniabactin biosynthetic protein | chromosome | CDS | 1812793 | 6126 | - | 0.601371 |
iucC | YP_3448 | putative siderophore biosynthesis protein IucC | chromosome | CDS | 3917254 | 1749 | - | 0.539165 |
iucD | YP_3447 | putative siderophore biosynthesis protein IucD | chromosome | CDS | 3915929 | 1329 | - | 0.536494 |
kduD | YP_1749 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 1938275 | 807 | - | 0.486989 |
kduD2 | YP_3535 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 4023569 | 756 | + | 0.531746 |
menF | YP_2339 | menaquinone-specific isochorismate synthase | chromosome | CDS | 2601979 | 1374 | - | 0.5131 |
mhpD2 | YP_1454 | putative hydrolase | chromosome | CDS | 1611622 | 843 | + | 0.5172 |
mhpD3 | YP_1925 | putative fumarylacetoacetate hydrolase family protein | chromosome | CDS | 2143778 | 543 | + | 0.475138 |
paaI1 | YP_2193 | Uncharacterized protein, possibly involved in aromatic compounds catabolism | chromosome | CDS | 2438879 | 417 | - | 0.53717 |
paaI2 | YP_3213 | Uncharacterized protein, possibly involved in aromatic compounds catabolism | chromosome | CDS | 3585498 | 471 | - | 0.484076 |
phnL2 | YP_0845 | putative ABC transporter ATP-binding protein | chromosome | CDS | 917119 | 687 | + | 0.521106 |
pldB1 | YP_0867 | Lysophospholipase | chromosome | CDS | 932445 | 1764 | + | 0.521542 |
pncA | YP_1960 | putative pyrazinamidase/nicotinamidase | chromosome | CDS | 2178508 | 648 | - | 0.496914 |
rrmA | YP_1488 | rRNA (guanine-N1-)-methyltransferase | chromosome | CDS | 1647777 | 840 | + | 0.485714 |
smtA1 | YP_0717 | SAM-dependent methyltransferase | chromosome | CDS | 775548 | 522 | + | 0.43295 |
smtA2 | YP_1191 | putative methyltransferase | chromosome | CDS | 1289566 | 792 | - | 0.479798 |
smtA3 | YP_1250 | putative ABC transport protein | chromosome | CDS | 1364989 | 798 | - | 0.498747 |
smtA4 | YP_1839 | SAM-dependent methyltransferase | chromosome | CDS | 2049602 | 660 | - | 0.443939 |
smtA5 | YP_1892 | SAM-dependent methyltransferase | chromosome | CDS | 2109609 | 972 | - | 0.52572 |
smtA6 | YP_1893 | SAM-dependent methyltransferase | chromosome | CDS | 2110577 | 804 | - | 0.49005 |
smtA8 | YP_2769 | SAM-dependent methyltransferase | chromosome | CDS | 3074451 | 720 | - | 0.466667 |
smtA9 | YP_3336 | SAM-dependent methyltransferase | chromosome | CDS | 3732637 | 771 | - | 0.574578 |
sufI1 | YP_0276 | hypothetical protein | chromosome | CDS | 282546 | 1776 | + | 0.522523 |
sufI2 | YP_2989 | putative cell division protein | chromosome | CDS | 3326206 | 1425 | + | 0.524912 |
tauD | YP_0184 | putative taurine dioxygenase | chromosome | CDS | 201715 | 867 | + | 0.507497 |
tehB | YP_1693 | putative tellurite resistance protein | chromosome | CDS | 1867254 | 888 | + | 0.45045 |
ucpA | YP_1453 | putative oxidoreductase | chromosome | CDS | 1610834 | 741 | + | 0.535762 |
ybtD | YP_1468 | putative phosphopantetheinyl transferase | chromosome | CDS | 1627907 | 741 | + | 0.468286 |
ybtE | YP_1650 | yersiniabactin siderophore biosynthetic protein | chromosome | CDS | 1799736 | 1578 | - | 0.588086 |
ybtT | YP_1651 | yersiniabactin biosynthetic protein YbtT | chromosome | CDS | 1801317 | 804 | - | 0.583333 |
ybtU | YP_1652 | yersiniabactin biosynthetic protein YbtU | chromosome | CDS | 1802117 | 1161 | - | 0.601206 |
ypeI | YP_2275 | N-acylhomoserine lactone synthase YpeI | chromosome | CDS | 2524043 | 657 | + | 0.365297 |
yspI | YP_3455 | N-acylhomoserine lactone synthase YspI | chromosome | CDS | 3927235 | 651 | - | 0.411674 |
ysuG | YP_1421 | putative siderophore biosynthetic enzyme | chromosome | CDS | 1569624 | 1890 | + | 0.469841 |
Yersinia pseudotuberculosis IP 32953, IP32953 | ||||||||
Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | YPTB3293 | putative thioesterase | chromosome | CDS | 3894299 | 774 | - | 0.488372 |
NA | YPTB3814 | metalloprotease | chromosome | CDS | 4548727 | 1338 | + | 0.422272 |
NA | YPTB3219 | pore forming RTX toxin family protein | chromosome | CDS | 3783316 | 9312 | - | 0.371241 |
NA | YPTB3294 | hypothetical protein | chromosome | CDS | 3895065 | 1128 | - | 0.496454 |
NA | YPTB2675 | putative fimbrial protein | chromosome | CDS | 3162076 | 1032 | + | 0.46124 |
NA | YPTB3296 | putative siderophore biosysnthesis protein. | chromosome | CDS | 3897256 | 5667 | - | 0.492324 |
NA | YPTB1478 | putative 3-oxoacyl-acyl carrier protein reductase | chromosome | CDS | 1772255 | 789 | + | 0.395437 |
NA | YPTB1985 | putative dehydrogenase | chromosome | CDS | 2340757 | 681 | - | 0.405286 |
NA | YPTB1372 | hypothetical protein | chromosome | CDS | 1634450 | 789 | + | 0.503169 |
NA | YPTB0200 | hypothetical protein | chromosome | CDS | 240730 | 471 | - | 0.484076 |
NA | YPTB3261 | hypothetical protein | chromosome | CDS | 3841125 | 834 | + | 0.384892 |
NA | YPTB1030 | putative permease | chromosome | CDS | 1236451 | 2430 | + | 0.542387 |
NA | YPTB0249 | putative carboxymethylenebutenolidase | chromosome | CDS | 294124 | 804 | - | 0.493781 |
NA | YPTB1888 | hypothetical protein | chromosome | CDS | 2229918 | 813 | + | 0.377614 |
NA | YPTB1638 | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-carboxymeth... | chromosome | CDS | 1989521 | 765 | + | 0.478431 |
NA | YPTB2033 | hypothetical protein | chromosome | CDS | 2397145 | 804 | - | 0.492537 |
NA | YPTB1473 | putative beta-ketoacyl-[acyl-carrier-protein] synthase | chromosome | CDS | 1767510 | 1284 | + | 0.430685 |
NA | YPTB1607 | putative phosphopantetheinyl transferase | chromosome | CDS | 1954627 | 741 | + | 0.469636 |
NA | YPTB2966 | hypothetical protein | chromosome | CDS | 3499431 | 720 | - | 0.465278 |
NA | YPTB2064 | putative fumarylacetoacetate hydrolase family protein | chromosome | CDS | 2430775 | 657 | + | 0.473364 |
NA | YPTB3815 | hypothetical protein | chromosome | CDS | 4550129 | 771 | - | 0.575875 |
NA | YPTB1984 | hypothetical protein | chromosome | CDS | 2339993 | 660 | - | 0.443939 |
NA | YPTB1576 | 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase / 5-carboxymeth... | chromosome | CDS | 1902257 | 843 | + | 0.518387 |
NA | YPTB1047 | hypothetical protein | chromosome | CDS | 1250418 | 1764 | + | 0.520975 |
NA | YPTB2032 | hypothetical protein | chromosome | CDS | 2396177 | 972 | - | 0.524691 |
NA | YPTB1886 | hypothetical protein | chromosome | CDS | 2228366 | 726 | + | 0.318182 |
NA | YPTB2137 | short chain dehydrogenase | chromosome | CDS | 2512472 | 762 | - | 0.519685 |
NA | YPTB1319 | putative short chain oxidoreductase | chromosome | CDS | 1571294 | 816 | - | 0.584559 |
NA | YPTB0923 | short chain dehydrogenase | chromosome | CDS | 1115815 | 681 | + | 0.503671 |
NA | YPTB1575 | putative oxidoreductase | chromosome | CDS | 1901469 | 741 | + | 0.537112 |
NA | YPTB1027 | short chain dehydrogenase | chromosome | CDS | 1233999 | 777 | - | 0.526384 |
NA | YPTB1684 | short chain dehydrogenase | chromosome | CDS | 2037975 | 2067 | + | 0.52298 |
NA | YPTB1474 | putative beta-ketoacyl-[acyl-carrier-protein] reductase | chromosome | CDS | 1768786 | 747 | + | 0.429719 |
NA | YPTB2196 | putative transcriptional regulator | chromosome | CDS | 2585058 | 1803 | - | 0.513034 |
NA | YPTB1550 | putative siderophore biosynthetic enzyme | chromosome | CDS | 1866652 | 1815 | - | 0.427548 |
NA | YPTB1470 | putative short chain dehydrogenase | chromosome | CDS | 1765037 | 747 | - | 0.420348 |
NA | YPTB1480 | putative acyl carrier protein | chromosome | CDS | 1773608 | 249 | + | 0.337349 |
NA | YPTB3297 | possible high molecular weight siderophore biosynthesis protein. | chromosome | CDS | 3902935 | 11661 | - | 0.496098 |
NA | YPTB0781 | short chain dehydrogenase | chromosome | CDS | 939092 | 771 | + | 0.499352 |
NA | YPTB2315 | hypothetical protein | chromosome | CDS | 2732264 | 417 | - | 0.53717 |
acpP | YPTB2470 | acyl carrier protein | chromosome | CDS | 2915805 | 237 | - | 0.434599 |
alcA | YPTB1542 | putative siderophore biosynthetic enzyme | chromosome | CDS | 1856239 | 1299 | + | 0.431871 |
alcC | YPTB1544 | putative siderophore biosynthetic enzyme | chromosome | CDS | 1858112 | 1845 | + | 0.469919 |
bioC | YPTB1184 | biotin synthesis protein BioC | chromosome | CDS | 1411713 | 804 | + | 0.537313 |
elbB | YPTB3498 | enhancing lycopene biosynthesis protein 2 | chromosome | CDS | 4163287 | 654 | - | 0.457187 |
fabB | YPTB2626 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 3103047 | 1224 | - | 0.498366 |
fabF | YPTB2469 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 2914469 | 1242 | - | 0.492754 |
fabF2 | YPTB1449 | 3-oxoacyl-(acyl carrier protein) synthase | chromosome | CDS | 1741759 | 1275 | - | 0.523922 |
fabG | YPTB2471 | 3-ketoacyl-(acyl-carrier-protein) reductase | chromosome | CDS | 2916195 | 735 | - | 0.482993 |
fadD | YPTB2057 | acyl-CoA synthase | chromosome | CDS | 2423483 | 1689 | + | 0.485494 |
hpaB | YPTB1645 | 4-hydroxyphenylacetate 3-monooxygenase | chromosome | CDS | 1996222 | 1563 | + | 0.486884 |
hpaG | YPTB1637 | putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-ca... | chromosome | CDS | 1988892 | 633 | + | 0.510269 |
hpaH | YPTB1642 | 2-oxo-hept-3-ene-1,7-dioate hydratase | chromosome | CDS | 1993141 | 804 | + | 0.504975 |
hutI | YPTB1966 | imidazolonepropionase | chromosome | CDS | 2316318 | 1221 | - | 0.506142 |
idnO | YPTB2571 | gluconate 5-dehydrogenase | chromosome | CDS | 3042812 | 765 | + | 0.44183 |
irp1 | YPTB1595 | yersiniabactin biosynthetic protein | chromosome | CDS | 1924950 | 9492 | - | 0.60788 |
irp2 | YPTB1596 | yersiniabactin biosynthetic protein | chromosome | CDS | 1934529 | 6108 | - | 0.601506 |
iucC | YPTB3265 | putative siderophore biosynthesis protein IucC | chromosome | CDS | 3846315 | 1749 | + | 0.539737 |
iucD | YPTB3266 | putative siderophore biosynthesis protein IucD | chromosome | CDS | 3848060 | 1329 | + | 0.536494 |
kduD1 | YPTB2357 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 2777111 | 762 | + | 0.488189 |
kduD2 | YPTB3083 | 2-deoxy-D-gluconate 3-dehydrogenase | chromosome | CDS | 3636899 | 756 | + | 0.533069 |
menE | YPTB2556 | O-succinylbenzoic acid--CoA ligase | chromosome | CDS | 3023204 | 1416 | - | 0.576977 |
menF | YPTB2561 | menaquinone-specific isochorismate synthase | chromosome | CDS | 3029195 | 1374 | - | 0.510917 |
pncA | YPTB2086 | putative pyrazinamidase/nicotinamidase | chromosome | CDS | 2456678 | 648 | - | 0.5 |
rhbC | YPTB3263 | possible siderophore biosynthesis protein, IucA familly | chromosome | CDS | 3843612 | 1773 | + | 0.532431 |
rrmA | YPTB1626 | rRNA (guanine-N1-)-methyltransferase | chromosome | CDS | 1974795 | 840 | + | 0.486905 |
smtA | YPTB1427 | putative methyltransferase | chromosome | CDS | 1709395 | 786 | + | 0.478372 |
sufI | YPTB3390 | putative cell division protein | chromosome | CDS | 4025644 | 1425 | - | 0.522807 |
tauD | YPTB3719 | putative taurine dioxygenase | chromosome | CDS | 4414613 | 849 | - | 0.510012 |
tehB | YPTB1947 | putative tellurite resistance protein | chromosome | CDS | 2288891 | 888 | + | 0.451577 |
yacK | YPTB0722 | conserved cupredoxin-like protein | chromosome | CDS | 867390 | 1602 | + | 0.531835 |
yafE | YPTB0908 | putative methyltransferase in menaquinone/biotin biosynthesis | chromosome | CDS | 1095450 | 522 | + | 0.427203 |
ybbA | YPTB1029 | putative ABC transporter ATP-binding protein | chromosome | CDS | 1235768 | 687 | + | 0.519651 |
ybtE | YPTB1592 | yersiniabactin siderophore biosynthetic protein | chromosome | CDS | 1921472 | 1578 | - | 0.58872 |
ybtT | YPTB1593 | yersiniabactin biosynthetic protein YbtT | chromosome | CDS | 1923053 | 789 | - | 0.584284 |
ybtU | YPTB1594 | yersiniabactin biosynthetic protein YbtU | chromosome | CDS | 1923853 | 1101 | - | 0.603088 |
ypsI | YPTB2499 | N-acylhomoserine lactone synthase YpeI | chromosome | CDS | 2949583 | 645 | + | 0.367442 |
yrbC | YPTB3516 | Conserved putative exported protein | chromosome | CDS | 4185269 | 624 | - | 0.483974 |
yrbD | YPTB3517 | Conserved putative membrane protein | chromosome | CDS | 4185905 | 558 | - | 0.483871 |
yrbE | YPTB3518 | ABC transporter, permease subunit, toluene tolerance protein | chromosome | CDS | 4186467 | 783 | - | 0.505747 |
yrbF | YPTB3519 | ABC transporter, ATP-binding subunit, toluene tolerance protein | chromosome | CDS | 4187467 | 819 | - | 0.489621 |
yspI | YPTB3258 | N-acylhomoserine lactone synthase YspI | chromosome | CDS | 3837443 | 651 | + | 0.411674 |