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2024-05-23 17:54:10

Gene list

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Genomic element: pO157

Number of genes found: 187

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli O157:H7 EDL933, EDL933
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pO157 -10_signal2439 7 + 0.428571
NA pO157 promoter73746 30 + 0.5
NA L7023 hypothetical proteinpO157 CDS16148 150 - 0.486667
NA L7078 hypothetical proteinpO157 CDS65003 423 + 0.555556
NA L7021 hypothetical proteinpO157 CDS15307 108 - 0.435185
NA L7016 hypothetical proteinpO157 CDS7041 240 + 0.529167
NA pO157 repeat_region48460 21 + 0.380952
NA pO157 promoter6167 30 - 0.466667
NA pO157 repeat_region47890 21 + 0.380952
NA L7018 hypothetical proteinpO157 CDS9627 390 + 0.379487
NA pO157 repeat_region77768 490 + 0.497959
NA L7081 hypothetical proteinpO157 CDS66891 1362 + 0.571219
NA pO157 repeat_region53269 1310 + 0.539695
NA L7091 putative nickasepO157 CDS74290 1974 + 0.519757
NA L7060 hypothetical proteinpO157 CDS50750 684 - 0.69152
NA pO157 promoter26426 29 + 0.310345
NA pO157 misc_feature4072 9 + 0.333333
NA pO157 promoter8073 30 + 0.533333
NA L7046 hypothetical proteinpO157 CDS37943 822 + 0.530414
NA L7009 replication proteinpO157 CDS4259 195 + 0.54359
NA L7076 hypothetical proteinpO157 CDS63337 777 + 0.611326
NA pO157 promoter7323 28 + 0.285714
NA L7070 hypothetical proteinpO157 CDS57934 273 + 0.615385
NA pO157 repeat_region49724 21 - 0.285714
NA pO157 RBS2473 6 + 0.666667
NA pO157 rep_origin4084 149 + 0.355705
NA L7067 rep protein E1pO157 CDS54669 156 + 0.49359
NA pO157 misc_feature2240 88 - 0.545455
NA pO157 promoter87558 30 + 0.266667
NA L7013 pO157 misc_feature5755 222 - 0.536036
NA pO157 repeat_region48500 21 + 0.285714
NA pO157 repeat_region88476 424 + 0.518868
NA L7095 putative cytotoxinpO157 CDS78542 9510 + 0.313775
NA L7071 hypothetical proteinpO157 CDS58290 297 - 0.498316
NA L7004 putative hemolysin expression-modulating proteinpO157 CDS1658 210 + 0.357143
NA pO157 promoter91037 30 + 0.5
NA L7061 hypothetical proteinpO157 CDS51489 195 + 0.502564
NA pO157 RBS3032 4 + 0.5
NA pO157 promoter2754 29 + 0.344828
NA L7005 hypothetical proteinpO157 CDS1905 339 + 0.486726
NA L7066 hypothetical proteinpO157 CDS54198 327 - 0.541284
NA pO157 promoter17906 29 + 0.275862
NA pO157 promoter84137 30 + 0.266667
NA L7080 hypothetical proteinpO157 CDS66627 261 - 0.609195
NA pO157 promoter17290 30 + 0.266667
NA pO157 promoter1899 29 + 0.206897
NA L7082 hypothetical proteinpO157 CDS68299 564 + 0.586879
NA pO157 promoter88850 28 + 0.392857
NA L7097 hypothetical proteinpO157 CDS88342 504 - 0.517857
NA pO157 promoter10089 28 + 0.535714
NA L7025 hypothetical proteinpO157 CDS16882 174 + 0.442529
NA L7093 putative transposasepO157 CDS77322 360 - 0.511111
NA pO157 promoter54529 28 + 0.392857
NA L7094 transposasepO157 CDS77863 411 + 0.50365
NA L7019 transposasepO157 CDS10174 888 + 0.536036
NA pO157 repeat_region49745 21 - 0.285714
NA pO157 repeat_region48333 21 + 0.333333
NA L7026 hypothetical proteinpO157 CDS17323 822 + 0.456204
NA pO157 promoter4169 29 + 0.310345
NA L7074 hypothetical proteinpO157 CDS61938 684 + 0.571637
NA pO157 promoter74309 30 + 0.533333
NA pO157 misc_feature69237 447 + 0.615213
NA pO157 promoter11225 28 + 0.178571
NA L7096 putative transposasepO157 CDS88143 273 + 0.534799
NA L7030 hypothetical proteinpO157 CDS22421 174 + 0.45977
NA pO157 promoter7134 28 - 0.464286
NA pO157 repeat_region73032 60 + 0.55
NA L7007 replication initiation proteinpO157 CDS2973 75 + 0.48
NA L7083 hypothetical proteinpO157 CDS68948 456 - 0.600877
NA L7051 hypothetical proteinpO157 CDS46498 195 + 0.271795
NA L7059 hypothetical proteinpO157 CDS50133 621 - 0.521739
NA L7058 hypothetical proteinpO157 CDS49936 237 - 0.510549
NA pO157 repeat_region48285 21 + 0.428571
NA pO157 promoter44726 28 + 0.25
NA L7003 hypothetical proteinpO157 CDS1151 462 + 0.491342
NA pO157 promoter51825 29 + 0.310345
NA L7092 hypothetical proteinpO157 CDS76331 432 + 0.444444
NA pO157 repeat_region54552 27 + 0.62963
NA pO157 repeat_region49766 21 - 0.428571
NA pO157 repeat_region48530 21 - 0.333333
NA pO157 promoter22915 30 + 0.233333
NA L7014 hypothetical proteinpO157 CDS6029 735 - 0.519728
NA pO157 RBS72943 9 + 0.555556
NA pO157 promoter42736 29 + 0.275862
NA L7077 hypothetical proteinpO157 CDS64531 426 + 0.542253
NA pO157 repeat_region54827 248 + 0.415323
NA L7015 transposasepO157 CDS6547 510 - 0.558824
NA pO157 misc_feature38737 36 + 0.472222
NA pO157 promoter1025 28 + 0.25
NA L7010 hypothetical proteinpO157 CDS4810 285 + 0.547368
NA pO157 repeat_region88137 212 + 0.54717
NA L7027 hypothetical proteinpO157 CDS18147 1104 + 0.508152
NA pO157 promoter34145 30 + 0.6
NA L7011 pO157 misc_feature5139 5 +
NA pO157 repeat_region5661 1555 + 0.524759
NA pO157 -35_signal2416 6 + 0.666667
NA pO157 promoter60631 28 + 0.392857
NA pO157 promoter69611 30 - 0.5
NA L7079 hypothetical proteinpO157 CDS65583 531 - 0.619586
NA pO157 promoter4764 30 + 0.233333
NA pO157 repeat_region15426 501 + 0.49501
NA pO157 promoter47064 29 + 0.172414
NA L7029 lipid A biosynthesis lauroyl acyltransferasepO157 CDS21102 1032 + 0.475775
NA L7031 hypothetical proteinpO157 CDS23016 2697 + 0.447905
NA pO157 promoter77734 30 + 0.533333
NA L7012 hypothetical proteinpO157 CDS5440 288 - 0.340278
NA pO157 repeat_region77032 733 + 0.472033
NA L7053 putative serine-threonine protein kinasepO157 CDS47175 231 + 0.437229
NA pO157 promoter1390 30 + 0.433333
NA L7024 regulatory proteinpO157 CDS16587 135 + 0.474074
NA pO157 repeat_region57622 130 + 0.538462
NA pO157 repeat_region5986 682 - 0.51173
NA pO157 misc_feature37521 36 + 0.5
NA pO157 promoter6753 28 - 0.571429
NA pO157 promoter37539 28 + 0.5
NA pO157 promoter653 29 + 0.344828
NA pO157 repeat_region49703 21 - 0.285714
NA L7055 replication proteinpO157 CDS47955 318 - 0.584906
NA L7056 replication proteinpO157 CDS48551 954 - 0.525157
NA pO157 promoter16606 29 + 0.482759
NA pO157 misc_feature4521 150 - 0.6
NA pO157 misc_feature3847 249 + 0.522088
NA pO157 repeat_region48315 21 + 0.380952
NA L7057 replication proteinpO157 CDS49266 330 + 0.49697
NA L7085 hypothetical proteinpO157 CDS70187 261 + 0.517241
NA L7073 hypothetical proteinpO157 CDS60650 903 + 0.547065
NA pO157 repeat_region37521 1252 + 0.507188
NA L7054 replication proteinpO157 CDS47910 357 + 0.585434
NA pO157 promoter39216 29 + 0.275862
NA L7086 hypothetical proteinpO157 CDS70453 2019 + 0.583952
NA pO157 repeat_region9831 1273 + 0.504321
NA L7028 hypothetical proteinpO157 CDS19340 1722 + 0.479094
NA L7045 hypothetical proteinpO157 CDS37557 342 + 0.450292
NA L7011 hypothetical proteinpO157 CDS5094 276 + 0.485507
NA pO157 repeat_region49680 21 - 0.380952
NA L7072 hypothetical proteinpO157 CDS58849 1725 + 0.470725
NA pO157 promoter78518 29 + 0.275862
NA pO157 repeat_region53269 27 + 0.592593
NA pO157 promoter46416 30 + 0.233333
NA L7002 hypothetical proteinpO157 CDS698 252 + 0.587302
NA L7052 hypothetical proteinpO157 CDS46722 285 + 0.333333
NA L7075 hypothetical proteinpO157 CDS62737 555 + 0.565766
EHEC-hlyA L7048 hemolysin toxin proteinpO157 CDS39822 2997 + 0.39306
EHEC-hlyB L7049 hemolysin transport proteinpO157 CDS42868 2121 + 0.37388
EHEC-hlyC L7047 hemolysin transport proteinpO157 CDS39305 516 + 0.348837
EHEC-hlyD L7050 hemolysin transport proteinpO157 CDS44992 1440 + 0.365972
ccdA L7062 plasmid maintenance proteinpO157 CDS51892 219 + 0.506849
ccdB L7063 plasmid maintenance proteinpO157 CDS52112 306 + 0.503268
cpb2 L7006 protein CopBpO157 CDS2483 255 + 0.439216
espP L7020 putative exoprotein-precursorpO157 CDS11242 3903 + 0.442993
etpC L7032 type II secretion proteinpO157 CDS25799 876 + 0.423516
etpD L7033 type II secretion proteinpO157 CDS26714 1929 + 0.503888
etpE L7034 type II secretion proteinpO157 CDS28642 1506 + 0.536521
etpF L7035 type II secretion proteinpO157 CDS30149 1224 + 0.565359
etpG L7036 type II secretion proteinpO157 CDS31403 435 + 0.514943
etpH L7037 type II secretion proteinpO157 CDS31834 555 + 0.533333
etpI L7038 type II secretion proteinpO157 CDS32385 366 + 0.579235
etpJ L7039 type II secretion proteinpO157 CDS32747 600 + 0.548333
etpK L7040 type II secretion proteinpO157 CDS33343 978 + 0.53681
etpL L7041 type II secretion proteinpO157 CDS34254 1278 + 0.56651
etpM L7042 type II secretion proteinpO157 CDS35518 513 + 0.530214
etpN L7043 type II secretion proteinpO157 CDS36088 834 + 0.527578
etpO L7044 type II secretion proteinpO157 CDS37013 402 + 0.447761
finO L7001 fertility inhibition proteinpO157 CDS1 561 + 0.566845
flmA L7090 stable plasmid inheritance proteinpO157 CDS73950 159 + 0.471698
flmB L7101 pO157 misc_RNA73798 104 + 0.490385
flmC L7089 hypothetical proteinpO157 CDS73892 213 + 0.483568
insA L7022 transposasepO157 CDS15609 273 - 0.494505
katP L7017 EHEC-catalase/peroxidasepO157 CDS7373 2211 + 0.456807
psb1 L7087 putative regulator of SOS inductionpO157 CDS72523 438 + 0.570776
psiA L7088 hypothetical proteinpO157 CDS72957 762 + 0.589239
redF L7064 resolvasepO157 CDS52418 807 + 0.568773
rep2 L7008 replication initiation proteinpO157 CDS3040 858 + 0.575758
sopA L7068 pO157 RBS55400 4 + 0.5
sopA L7068 pO157 -10_signal55370 6 +
sopA L7068 pO157 -35_signal55347 6 + 0.333333
sopA L7068 plasmid-partitioning proteinpO157 CDS55412 1167 + 0.471294
sopB L7069 pO157 RBS56565 7 + 0.571429
sopB L7069 pO157 terminator57603 25 + 0.56
sopB L7069 pO157 -10_signal56533 6 + 0.166667
sopB L7069 pO157 -35_signal56508 6 + 0.166667
sopB L7069 plasmid partitioning proteinpO157 CDS56578 972 + 0.459877
ssb L7084 single-stranded DNA-binding proteinpO157 CDS69666 492 + 0.575203
tra6 L7065 transposasepO157 CDS53311 891 - 0.539843
traI L7098 DNA helicasepO157 CDS88992 1299 + 0.618938
traX L7099 F pilin acetylasepO157 CDS90310 747 + 0.580991
ypt2 L7100 hypothetical proteinpO157 CDS91115 861 + 0.444832