Gene list
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Genomic element: pUTI89
Number of genes found: 145
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Escherichia coli UTI89, UTI89 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | UTI89_P026 | immunity protein | pUTI89 | CDS | 18300 | 336 | + | 0.354167 |
NA | UTI89_P068 | hypothetical protein | pUTI89 | CDS | 58515 | 270 | + | 0.611111 |
NA | UTI89_P097 | fatty-acid-CoA ligase-like protein | pUTI89 | CDS | 74228 | 213 | + | 0.488263 |
NA | UTI89_P039 | hypothetical protein | pUTI89 | CDS | 33531 | 348 | + | 0.566092 |
NA | UTI89_P053 | hypothetical protein | pUTI89 | CDS | 48236 | 231 | + | 0.541126 |
NA | UTI89_P019 | hypothetical protein | pUTI89 | CDS | 15809 | 396 | + | 0.545455 |
NA | UTI89_P073 | hypothetical protein | pUTI89 | CDS | 61656 | 204 | + | 0.544118 |
NA | UTI89_P035 | hypothetical protein | pUTI89 | CDS | 30440 | 372 | - | 0.540323 |
NA | UTI89_P051 | hypothetical protein | pUTI89 | CDS | 46171 | 330 | + | 0.5 |
NA | UTI89_P143 | hypothetical protein | pUTI89 | CDS | 113020 | 213 | + | 0.661972 |
NA | UTI89_P080 | hypothetical protein | pUTI89 | CDS | 65299 | 423 | + | 0.543735 |
NA | UTI89_P141 | hypothetical protein | pUTI89 | CDS | 111368 | 861 | + | 0.440186 |
NA | UTI89_P091 | hypothetical protein | pUTI89 | CDS | 69670 | 237 | - | 0.535865 |
NA | UTI89_P060 | hypothetical protein | pUTI89 | CDS | 52044 | 276 | - | 0.456522 |
NA | UTI89_P010 | hypothetical protein | pUTI89 | CDS | 6106 | 1887 | + | 0.556969 |
NA | UTI89_P006 | transposase for IS26 | pUTI89 | CDS | 3292 | 717 | + | 0.531381 |
NA | UTI89_P089 | hypothetical protein | pUTI89 | CDS | 68562 | 564 | + | 0.579787 |
NA | UTI89_P066 | hypothetical protein | pUTI89 | CDS | 56646 | 519 | + | 0.375723 |
NA | UTI89_P096 | plasmid SOS inhibition protein A | pUTI89 | CDS | 73291 | 720 | + | 0.595833 |
NA | UTI89_P090 | hypothetical protein | pUTI89 | CDS | 69211 | 459 | - | 0.605664 |
NA | UTI89_P085 | hypothetical protein | pUTI89 | CDS | 66356 | 258 | - | 0.554264 |
NA | UTI89_P025 | hypothetical protein | pUTI89 | CDS | 18200 | 123 | + | 0.317073 |
NA | UTI89_P037 | hypothetical protein | pUTI89 | CDS | 31120 | 1509 | + | 0.534791 |
NA | UTI89_P099 | hypothetical protein | pUTI89 | CDS | 75060 | 237 | - | 0.540084 |
NA | UTI89_P139 | hypothetical protein | pUTI89 | CDS | 107306 | 570 | - | 0.621053 |
NA | UTI89_P101 | hypothetical protein | pUTI89 | CDS | 75766 | 822 | + | 0.442822 |
NA | UTI89_P022 | hypothetical protein | pUTI89 | CDS | 17038 | 261 | + | 0.505747 |
NA | UTI89_P009 | sodium-translocating NADH dehydrogenase (ubiquinone) gamma subunit | pUTI89 | CDS | 4998 | 762 | + | 0.484252 |
NA | UTI89_P032 | hypothetical protein | pUTI89 | CDS | 27292 | 327 | + | 0.541284 |
NA | UTI89_P144 | hypothetical protein | pUTI89 | CDS | 113465 | 474 | + | 0.476793 |
NA | UTI89_P042 | hypothetical protein | pUTI89 | CDS | 37498 | 789 | - | 0.435995 |
NA | UTI89_P033 | insertion sequence ATP-binding protein | pUTI89 | CDS | 27760 | 756 | - | 0.537037 |
NA | UTI89_P086 | hypothetical protein | pUTI89 | CDS | 66872 | 231 | + | 0.571429 |
NA | UTI89_P021 | putative transposase OrfA protein of insertion sequence IS629 | pUTI89 | CDS | 16610 | 327 | - | 0.544343 |
NA | UTI89_P116 | hypothetical protein | pUTI89 | CDS | 85395 | 219 | + | 0.420091 |
NA | UTI89_P054 | hypothetical protein | pUTI89 | CDS | 49212 | 168 | - | 0.369048 |
NA | UTI89_P121 | hypothetical protein | pUTI89 | CDS | 90635 | 312 | + | 0.352564 |
NA | UTI89_P001 | hypothetical protein | pUTI89 | CDS | 1 | 591 | + | 0.497462 |
NA | UTI89_P072 | hypothetical protein | pUTI89 | CDS | 61466 | 222 | + | 0.504505 |
NA | UTI89_P046 | hypothetical serine-threonine protein kinase | pUTI89 | CDS | 44164 | 189 | + | 0.497355 |
NA | UTI89_P036 | hypothetical protein | pUTI89 | CDS | 30726 | 426 | - | 0.556338 |
NA | UTI89_P005 | putative transposase | pUTI89 | CDS | 3238 | 594 | - | 0.53367 |
NA | UTI89_P017 | hypothetical protein | pUTI89 | CDS | 13751 | 381 | + | 0.488189 |
NA | UTI89_P044 | IS2 OrfA | pUTI89 | CDS | 40503 | 411 | + | 0.501217 |
NA | UTI89_P014 | putative integral membrane protein | pUTI89 | CDS | 11319 | 1131 | + | 0.584439 |
NA | UTI89_P003 | hypothetical protein | pUTI89 | CDS | 1324 | 75 | + | 0.493333 |
NA | UTI89_P102 | hypothetical protein | pUTI89 | CDS | 76883 | 510 | - | 0.452941 |
NA | UTI89_P043 | putative hemin receptor | pUTI89 | CDS | 38296 | 1971 | - | 0.488077 |
NA | UTI89_P083 | hypothetical protein | pUTI89 | CDS | 65886 | 495 | - | 0.654545 |
NA | UTI89_P016 | putative thioredoxin-family protein | pUTI89 | CDS | 13136 | 486 | + | 0.580247 |
NA | UTI89_P011 | hypothetical protein | pUTI89 | CDS | 8033 | 528 | + | 0.534091 |
NA | UTI89_P075 | hypothetical protein | pUTI89 | CDS | 62243 | 684 | + | 0.573099 |
NA | UTI89_P015 | ABC transporter, ATP-binding protein | pUTI89 | CDS | 12454 | 696 | + | 0.570402 |
NA | UTI89_P041 | putative transposase | pUTI89 | CDS | 35977 | 783 | + | 0.503193 |
NA | UTI89_P034 | hypothetical protein | pUTI89 | CDS | 28512 | 1500 | - | 0.538 |
NA | UTI89_P100 | hypothetical protein | pUTI89 | CDS | 75360 | 288 | + | 0.53125 |
NA | UTI89_P047 | hypothetical protein | pUTI89 | CDS | 44334 | 129 | + | 0.472868 |
NA | UTI89_P081 | hypothetical protein | pUTI89 | CDS | 65718 | 192 | + | 0.515625 |
NA | UTI89_P038 | hypothetical protein | pUTI89 | CDS | 33130 | 405 | + | 0.493827 |
NA | UTI89_P084 | hypothetical protein | pUTI89 | CDS | 66029 | 360 | + | 0.636111 |
NA | UTI89_P049 | hypothetical protein | pUTI89 | CDS | 44902 | 318 | - | 0.566038 |
NA | UTI89_P012 | hypothetical protein | pUTI89 | CDS | 8664 | 1380 | + | 0.571014 |
NA | UTI89_P059 | hypothetical protein | pUTI89 | CDS | 51100 | 681 | - | 0.582966 |
NA | UTI89_P013 | hypothetical protein | pUTI89 | CDS | 10046 | 1284 | + | 0.593458 |
NA | UTI89_P087 | hypothetical protein | pUTI89 | CDS | 66890 | 261 | - | 0.613027 |
NA | UTI89_P023 | hypothetical protein | pUTI89 | CDS | 17295 | 510 | + | 0.639216 |
NA | UTI89_P050 | replication protein RepFIB (P307 replicon) | pUTI89 | CDS | 45456 | 978 | - | 0.521472 |
NA | UTI89_P020 | hypothetical protein | pUTI89 | CDS | 16439 | 417 | + | 0.556355 |
NA | UTI89_P067 | transposase | pUTI89 | CDS | 57183 | 1221 | + | 0.504505 |
NA | UTI89_P031 | transposase | pUTI89 | CDS | 26961 | 267 | - | 0.573034 |
NA | UTI89_P040 | putative transposase | pUTI89 | CDS | 34958 | 1023 | + | 0.525904 |
NA | UTI89_P018 | hypothetical protein | pUTI89 | CDS | 15493 | 426 | + | 0.556338 |
NA | UTI89_P024 | hypothetical protein | pUTI89 | CDS | 17824 | 309 | - | 0.546926 |
NA | UTI89_P061 | hypothetical protein | pUTI89 | CDS | 52313 | 645 | - | 0.413953 |
artA | UTI89_P127 | hypothetical protein | pUTI89 | CDS | 94796 | 336 | - | 0.339286 |
ccdA | UTI89_P056 | plasmid maintenance protein CcdA | pUTI89 | CDS | 50571 | 219 | + | 0.502283 |
ccdB | UTI89_P057 | plasmid maintenance protein CcdB | pUTI89 | CDS | 50770 | 327 | + | 0.51682 |
cjrA | UTI89_P027 | putative inner membrane lipoprotein | pUTI89 | CDS | 21105 | 876 | + | 0.471461 |
cjrB | UTI89_P028 | putative periplasmic colicin Js sensitivity protein CjrB | pUTI89 | CDS | 21988 | 777 | + | 0.464607 |
cjrC | UTI89_P029 | putative outer membrane colicin Js receptor | pUTI89 | CDS | 22933 | 2262 | + | 0.485853 |
finO | UTI89_P142 | fertility inhibition protein | pUTI89 | CDS | 112331 | 561 | + | 0.54902 |
flmA | UTI89_P098 | stable plasmid inheritance protein | pUTI89 | CDS | 74286 | 159 | + | 0.477987 |
hmo | UTI89_P145 | putative regulator | pUTI89 | CDS | 113984 | 210 | + | 0.366667 |
impA | UTI89_P064 | UV protection and mutation protein | pUTI89 | CDS | 55829 | 438 | - | 0.552511 |
impC | UTI89_P065 | UV protection and mutation protein | pUTI89 | CDS | 56263 | 249 | - | 0.522088 |
int | UTI89_P048 | site-specific recombinase | pUTI89 | CDS | 44473 | 741 | + | 0.576248 |
istA | UTI89_P071 | transposase for insertion sequence element IS21 | pUTI89 | CDS | 60443 | 1173 | - | 0.531117 |
istB | UTI89_P070 | IS21 putative ATP-binding protein | pUTI89 | CDS | 59646 | 798 | - | 0.526316 |
pixB | UTI89_P045 | hypothetical protein | pUTI89 | CDS | 41509 | 273 | + | 0.318681 |
psb1 | UTI89_P095 | putative regulator of SOS induction | pUTI89 | CDS | 72860 | 435 | + | 0.563218 |
repA1 | UTI89_P004 | replication protein | pUTI89 | CDS | 1391 | 858 | + | 0.567599 |
repB | UTI89_P002 | replication protein RepB-like protein | pUTI89 | CDS | 831 | 261 | + | 0.402299 |
rsvB | UTI89_P058 | resolvase | pUTI89 | CDS | 51097 | 810 | + | 0.575309 |
scsC | UTI89_P007 | secreted copper-sensitivity suppressor C | pUTI89 | CDS | 4056 | 210 | + | 0.557143 |
scsD | UTI89_P008 | secreted copper-sensitivity suppressor D | pUTI89 | CDS | 4255 | 507 | + | 0.593688 |
senB | UTI89_P030 | enterotoxin TieB protein | pUTI89 | CDS | 25164 | 1275 | + | 0.452549 |
ssb | UTI89_P092 | single strand DNA-binding protein | pUTI89 | CDS | 69932 | 567 | + | 0.567901 |
stbA | UTI89_P062 | stable plasmid inheritance protein | pUTI89 | CDS | 53186 | 972 | + | 0.425926 |
stbB | UTI89_P063 | stable plasmid inheritance protein | pUTI89 | CDS | 54162 | 393 | + | 0.455471 |
traA | UTI89_P106 | F fimbriae pilin protein precursor | pUTI89 | CDS | 79434 | 360 | + | 0.458333 |
traB | UTI89_P110 | conjugal transfer protein TraB | pUTI89 | CDS | 81422 | 1428 | + | 0.570728 |
traC | UTI89_P117 | F pilus assembly protein TraC | pUTI89 | CDS | 85980 | 2631 | + | 0.540099 |
traD | UTI89_P137 | DNA binding protein TraD | pUTI89 | CDS | 103129 | 2145 | + | 0.520746 |
traE | UTI89_P108 | F pilus assembly protein TraE | pUTI89 | CDS | 80141 | 567 | + | 0.470899 |
traF | UTI89_P125 | F pilus assembly periplasmic protein TraF | pUTI89 | CDS | 93687 | 774 | + | 0.51292 |
traG | UTI89_P133 | mating contact stablization protein TraG | pUTI89 | CDS | 98035 | 2823 | + | 0.511158 |
traH | UTI89_P132 | putative ATP-binding F pilus assembly protein | pUTI89 | CDS | 96656 | 1383 | + | 0.522053 |
traI | UTI89_P138 | DNA helicase I | pUTI89 | CDS | 105273 | 5271 | + | 0.599696 |
traJ | UTI89_P104 | functional relaxosome complex initiator | pUTI89 | CDS | 78333 | 747 | + | 0.370817 |
traK | UTI89_P109 | F pilus assembly protein TraK | pUTI89 | CDS | 80694 | 729 | + | 0.57476 |
traL | UTI89_P107 | F fimbriae outer membrane protein | pUTI89 | CDS | 79808 | 312 | + | 0.467949 |
traM | UTI89_P103 | tra operon transcriptional repressor | pUTI89 | CDS | 77816 | 384 | + | 0.398438 |
traN | UTI89_P123 | mating contact stablization protein TraN | pUTI89 | CDS | 91590 | 1851 | + | 0.531605 |
traP | UTI89_P111 | conjugal transfer protein TraP | pUTI89 | CDS | 82839 | 591 | + | 0.500846 |
traQ | UTI89_P128 | F pilin synthesis protein | pUTI89 | CDS | 95212 | 285 | + | 0.522807 |
traR | UTI89_P114 | conjugal transfer protein TraR | pUTI89 | CDS | 84628 | 222 | + | 0.427928 |
traS | UTI89_P134 | surface exclusion inner membrane protein | pUTI89 | CDS | 100873 | 486 | + | 0.37037 |
traT | UTI89_P135 | surface exclusion outer membrane protein | pUTI89 | CDS | 101407 | 732 | + | 0.494536 |
traU | UTI89_P120 | F pilus assembly protein TraU | pUTI89 | CDS | 89619 | 993 | + | 0.546828 |
traV | UTI89_P113 | F pilus assembly protein TraV | pUTI89 | CDS | 83978 | 516 | + | 0.52907 |
traW | UTI89_P119 | F pilus assembly protein TraW | pUTI89 | CDS | 88990 | 633 | + | 0.595577 |
traX | UTI89_P140 | F pilin acetylation protein | pUTI89 | CDS | 110506 | 804 | + | 0.572139 |
traY | UTI89_P105 | plasmid nicking protein | pUTI89 | CDS | 79173 | 228 | + | 0.421053 |
trbA | UTI89_P126 | inner membrane protein TrbA | pUTI89 | CDS | 94474 | 342 | + | 0.383041 |
trbB | UTI89_P129 | F pilus assembly periplasmic protein TrbB | pUTI89 | CDS | 95483 | 546 | + | 0.558608 |
trbC | UTI89_P122 | F pilus assembly protein TrbC | pUTI89 | CDS | 90955 | 639 | + | 0.544601 |
trbD | UTI89_P112 | hypothetical protein | pUTI89 | CDS | 83368 | 369 | + | 0.409214 |
trbE | UTI89_P124 | inner membrane protein TrbE | pUTI89 | CDS | 93464 | 261 | + | 0.398467 |
trbF | UTI89_P131 | hypothetical protein | pUTI89 | CDS | 96253 | 426 | + | 0.375587 |
trbI | UTI89_P118 | hypothetical protein | pUTI89 | CDS | 88607 | 387 | + | 0.565891 |
trbJ | UTI89_P130 | F pilus assembly inner membrane protein TrbJ | pUTI89 | CDS | 95958 | 348 | + | 0.451149 |
yccB | UTI89_P069 | hypothetical protein | pUTI89 | CDS | 58798 | 855 | + | 0.526316 |
ycfA | UTI89_P078 | hypothetical protein | pUTI89 | CDS | 63641 | 771 | + | 0.60441 |
yciB | UTI89_P079 | hypothetical protein | pUTI89 | CDS | 64827 | 426 | + | 0.532864 |
ycjA | UTI89_P094 | hypothetical protein | pUTI89 | CDS | 70757 | 2049 | + | 0.578331 |
ycjB | UTI89_P082 | hypothetical protein | pUTI89 | CDS | 65773 | 384 | + | 0.59375 |
ydbA | UTI89_P088 | hypothetical protein | pUTI89 | CDS | 67154 | 1362 | + | 0.571953 |
ydeA | UTI89_P093 | hypothetical protein | pUTI89 | CDS | 70549 | 240 | + | 0.520833 |
ydiA | UTI89_P052 | hypothetical protein | pUTI89 | CDS | 47608 | 642 | - | 0.521807 |
yeaA | UTI89_P055 | hypothetical protein | pUTI89 | CDS | 49706 | 228 | - | 0.504386 |
yfbA | UTI89_P074 | hypothetical protein | pUTI89 | CDS | 61856 | 312 | + | 0.634615 |
yfcB | UTI89_P077 | hypothetical protein | pUTI89 | CDS | 63162 | 435 | + | 0.563218 |
yfeB | UTI89_P076 | hypothetical protein | pUTI89 | CDS | 62927 | 222 | + | 0.540541 |
yfiA | UTI89_P115 | hypothetical protein | pUTI89 | CDS | 84842 | 474 | + | 0.455696 |
yhfA | UTI89_P136 | hypothetical protein | pUTI89 | CDS | 102296 | 783 | + | 0.45977 |