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2024-05-10 17:11:56

Gene list

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COG category: Coenzyme transport and metabolism

Number of genes found: 4716

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Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
bioA BU292 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS320225 1287 + 0.299145
bioB BU291 biotin synthetasechromosome CDS319115 1032 - 0.282946
bioD BU290 dethiobiotin synthetasechromosome CDS318076 675 - 0.272593
cysD BU424 sulfate adenylyltransferase subunit 2chromosome CDS459239 909 - 0.308031
cysG BU425 ferrochelatasechromosome CDS460157 1422 - 0.281997
cysH BU426 phosphoadenosine phosphosulfate reductasechromosome CDS461917 735 - 0.27483
dxs BU464 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS508592 1827 - 0.308703
folA BU143 dihydrofolate reductasechromosome CDS149125 486 - 0.236626
folC BU167 dihydrofolate synthasechromosome CDS180565 1236 + 0.270227
folD BU486 methenyltetrahydrofolate cyclohydrolasechromosome CDS535936 858 + 0.286713
gshA BU407 glutamate-cysteine ligasechromosome CDS443565 1557 + 0.24727
gshB BU547 glutathione synthetasechromosome CDS583707 963 + 0.284528
hemC BU591 porphobilinogen deaminasechromosome CDS624014 945 + 0.28254
ilvC BU599 ketol-acid reductoisomerasechromosome CDS630120 1473 - 0.284453
ilvI BU226 acetolactate synthase large subunitchromosome CDS248819 1716 - 0.339161
ispA BU465 geranyltranstransferasechromosome CDS510476 849 - 0.240283
kdtB BU583 lipopolysaccharide core biosynthesis protein kDatBchromosome CDS616608 498 + 0.251004
lipA BU269 lipoyl synthasechromosome CDS294963 972 + 0.260288
lipB BU268 lipoate-protein ligase Bchromosome CDS294209 636 + 0.240566
metK BU408 S-adenosylmethionine synthetasechromosome CDS445268 1137 - 0.334213
nadE BU174 NAD(+) synthetasechromosome CDS187430 807 - 0.294919
panB BU197 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS213771 792 - 0.289141
panC BU196 pantoate-beta-alanine ligasechromosome CDS212899 858 - 0.226107
pncB BU361 nicotinate phosphoribosyltransferasechromosome CDS393991 1200 - 0.261667
ribA BU271 GTP cyclohydrolase II proteinchromosome CDS296797 585 + 0.311111
ribB BU059 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS64192 648 - 0.339506
ribD1 BU461 riboflavin deaminasechromosome CDS506978 426 + 0.307512
ribD2 BU462 riboflavin reductasechromosome CDS507446 624 + 0.258013
ribE BU112 riboflavin synthase subunit alphachromosome CDS117204 627 + 0.23764
ribF BU150 FMN adenylyltransferasechromosome CDS159484 942 - 0.234607
ribH BU459 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS505439 483 + 0.289855
serC BU312 phosphoserine aminotransferasechromosome CDS345066 1086 - 0.28453
thiL BU460 thiamin-monophosphate kinasechromosome CDS505951 972 + 0.260288
trpE BUpT01 anthranilate synthase component IpTrp CDS1 1566 + 0.323755
trpG BUpT02 anthranilate synthase small subunitpTrp CDS1569 603 + 0.338308
trpG2 BUpT04 anthranilate synthase small subunitpTrp CDS5199 603 + 0.338308
yacE BU203 hypothetical proteinchromosome CDS221834 654 - 0.227829
ybeN BU446 hypothetical proteinchromosome CDS487518 645 + 0.224806
yggW BU550 hypothetical proteinchromosome CDS585850 1131 + 0.247569
 
Buchnera aphidicola str. Bp (Baizongia pistaciae), Bp (Baizongia pistaciae)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
apbE bbp209 putative thiamine biosynthesis protein ApbE precursorchromosome CDS244469 1026 - 0.244639
bioA bbp273 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS313714 1290 + 0.272868
bioB bbp272 biotin synthasechromosome CDS312598 1035 - 0.28599
bioD bbp269 dethiobiotin synthetasechromosome CDS310034 684 - 0.285088
bioF bbp271 8-amino-7-oxononanoate synthasechromosome CDS311447 1155 - 0.292641
folA bbp133 dihydrofolate reductasechromosome CDS146011 495 - 0.234343
folC bbp157 folylpolyglutamate synthasechromosome CDS176994 1281 + 0.263076
folD bbp430 methylenetetrahydrofolate dehydrogenasechromosome CDS504309 864 + 0.310185
gshA bbp368 glutamate-cysteine ligasechromosome CDS424268 1566 + 0.243295
gshB bbp490 glutathione synthetasechromosome CDS552392 975 + 0.267692
ilvC bbp541 ketol-acid reductoisomerasechromosome CDS605635 1476 - 0.292005
ilvI bbp208 acetolactate synthase large subunitchromosome CDS242448 1731 - 0.326979
lipA bbp250 lipoyl synthasechromosome CDS287938 945 + 0.27619
lipB bbp249 lipoate-protein ligase Bchromosome CDS287195 612 + 0.253268
ribA bbp252 GTP cyclohydrolase II proteinchromosome CDS289913 600 + 0.278333
ribB bbp056 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS63734 636 - 0.331761
ribD bbp408 diaminohydroxyphosphoribosylaminopyrimidinedeaminasechromosome CDS476991 1119 + 0.277927
ribE bbp107 riboflavin synthase subunit alphachromosome CDS118530 639 + 0.270736
ribH bbp407 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS476422 480 + 0.2625
serC bbp289 phosphoserine aminotransferasechromosome CDS338022 1122 - 0.250446
trpE bbp526 anthranilate synthase component Ichromosome CDS589611 1569 - 0.289356
trpG bbp525 anthranilate synthase component IIchromosome CDS589033 579 - 0.295337
ygfA bbp370 5-formyltetrahydrofolate cyclo-ligasechromosome CDS427210 588 - 0.22619
yggW bbp498 putative oxidasechromosome CDS560559 1125 + 0.209778
 
Buchnera aphidicola str. Cc (Cinara cedri), Cc
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
cyoE BCc_287 CyoEchromosome CDS325934 921 - 0.158523
folD BCc_305 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS346377 855 + 0.231579
ilvC BCc_388 IlvCchromosome CDS406239 1473 - 0.24372
ilvI BCc_139 IlvIchromosome CDS163331 1725 - 0.265507
lipA BCc_170 LipAchromosome CDS198016 933 + 0.231511
lipB BCc_169 LipBchromosome CDS197331 609 + 0.192118
serC BCc_192 SerCchromosome CDS225626 1089 - 0.224977
yggW BCc_361 YggWchromosome CDS384938 1152 + 0.173611
 
Buchnera aphidicola str. Sg (Schizaphis graminum), Sg
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
bioA BUsg281 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS320276 1299 + 0.273287
bioB BUsg280 biotin synthasechromosome CDS319167 1029 - 0.282799
dxs BUsg448 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS509785 1758 - 0.307736
folA BUsg136 dihydrofolate reductasechromosome CDS149938 486 - 0.248971
folC BUsg161 dihydrofolate synthasechromosome CDS181237 1257 + 0.260939
folD BUsg470 methenyltetrahydrofolate cyclohydrolasechromosome CDS536830 858 + 0.291375
folE BUsg129 GTP cyclohydrolase Ichromosome CDS143817 657 + 0.226788
gshA BUsg392 glutamate--cysteine ligasechromosome CDS443649 1557 + 0.236994
gshB BUsg529 glutathione synthetasechromosome CDS584745 963 + 0.263759
ilvC BUsg575 ketol-acid reductoisomerasechromosome CDS630756 1476 - 0.268293
ilvI BUsg220 acetolactate synthase large subunitchromosome CDS249790 1716 - 0.316434
ispA BUsg449 geranyltranstransferasechromosome CDS511562 885 - 0.247458
kdtB BUsg562 phosphopantetheine adenylyltransferasechromosome CDS617470 498 + 0.228916
lipA BUsg259 lipoyl synthasechromosome CDS295766 960 + 0.273958
lipB BUsg258 lipoate-protein ligase Bchromosome CDS294987 657 + 0.229833
metK BUsg393 S-adenosylmethionine synthetasechromosome CDS445326 1140 - 0.321053
nadE BUsg168 NAD(+) synthetasechromosome CDS188190 807 - 0.26518
panB BUsg191 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS214671 792 - 0.282828
panC BUsg190 pantoate--beta-alanine ligasechromosome CDS213798 858 - 0.231935
pncB BUsg349 nicotinate phosphoribosyltransferasechromosome CDS394698 1197 - 0.25731
ribA BUsg261 GTP cyclohydrolase II proteinchromosome CDS297655 591 + 0.269036
ribB BUsg056 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS64337 642 - 0.32243
ribD1 BUsg445 riboflavin biosynthesis protein RibDchromosome CDS508202 444 + 0.306306
ribD2 BUsg446 riboflavin biosynthesis protein RibDchromosome CDS508664 654 + 0.235474
ribE BUsg104 riboflavin synthase subunit alphachromosome CDS117605 627 + 0.242424
ribF BUsg143 riboflavin biosynthesis protein RibFchromosome CDS160207 939 - 0.218317
ribH BUsg443 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS506724 480 + 0.25
serC BUsg302 phosphoserine aminotransferasechromosome CDS345790 1086 - 0.258748
thiL BUsg444 thiamine-monophosphate kinasechromosome CDS507207 972 + 0.254115
yacE BUsg197 hypothetical 22.6 kDa proteinchromosome CDS222655 633 - 0.197472
ybeN BUsg431 hypothetical 24.5 kDa proteinchromosome CDS488855 651 + 0.22427
ygcM BUsg402 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS455621 363 - 0.275482
ygfA BUsg396 hypothetical 21.1 kDa proteinchromosome CDS448120 600 - 0.253333
yggW BUsg532 hypothetical 42.6 kDa proteinchromosome CDS586881 1131 + 0.228117
 
Candidatus Blochmannia floridanus
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
birA Bfl184 bifunctional protein: biotin operon repressor and biotin-[acetyl-CoA carboxylase] synthetasechromosome CDS218136 825 + 0.271515
cysD Bfl162 sulfate adenylyltransferase subunit 2chromosome CDS195282 918 + 0.313726
cysG Bfl161 siroheme synthasechromosome CDS193837 1386 + 0.305195
cysH Bfl160 phosphoadenosine phosphosulfate reductasechromosome CDS192957 741 + 0.303644
dxs Bfl238 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS251626 1854 - 0.314455
folA Bfl124 dihydrofolate reductase type Ichromosome CDS142060 507 + 0.285996
folB Bfl061 dihydroneopterin aldolase, also has dihydroneopterin triphosphate 2'-epimerase activitychromosome CDS65861 369 + 0.238482
folC Bfl494 folylpolyglutamate synthasechromosome CDS548199 1248 - 0.290064
folD Bfl305 FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolasechromosome CDS337664 891 - 0.292929
folE Bfl472 GTP cyclohydrolase Ichromosome CDS520675 666 - 0.261261
folK Bfl150 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinasechromosome CDS175495 495 + 0.290909
folP Bfl099 dihydropteroate synthasechromosome CDS107925 846 + 0.309693
hemC Bfl580 porphobilinogen deaminasechromosome CDS650907 936 + 0.304487
hemD Bfl581 uroporphyrinogen-III synthetasechromosome CDS651868 744 + 0.306452
ilvC Bfl588 ketol-acid reductoisomerasechromosome CDS655543 1479 - 0.29547
ilvE Bfl591 branched-chain amino acid aminotransferasechromosome CDS660617 924 - 0.319264
ilvG Bfl593 acetolactate synthase II large subunitchromosome CDS661892 1665 - 0.340541
ispB Bfl092 octaprenyl-diphosphate synthasechromosome CDS101185 975 - 0.265641
lplA Bfl357 lipoate-protein ligase Achromosome CDS394844 1014 + 0.273176
metK Bfl252 S-adenosylmethionine synthetasechromosome CDS268376 1158 - 0.331606
pabA Bfl568 para-aminobenzoate synthase, glutamine amidotransferase component IIchromosome CDS637730 582 - 0.300687
pabB Bfl443 para-aminobenzoate synthase component Ichromosome CDS485126 1386 + 0.287157
pabC Bfl402 4-amino-4-deoxychorismate lyasechromosome CDS443622 819 - 0.263736
pdxA Bfl127 pyridoxal phosphate biosynthetic protein PdxAchromosome CDS144350 1029 - 0.300292
pdxB Bfl497 erythronate-4-phosphate dehydrogenasechromosome CDS551437 1119 - 0.292225
pdxH Bfl370 pyridoxamine 5'-phosphate oxidasechromosome CDS405628 645 + 0.249612
pdxJ Bfl539 pyridoxal phosphate biosynthetic proteinchromosome CDS601701 744 - 0.325269
ribA Bfl425 GTP cyclohydrolase II proteinchromosome CDS464182 600 + 0.31
ribB Bfl065 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS70261 642 + 0.330218
ribD Bfl234 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesischromosome CDS248862 1137 + 0.332454
ribE Bfl366 riboflavin synthase subunit alphachromosome CDS402614 609 + 0.252874
ribF Bfl117 riboflavin biosynthesis protein RibFchromosome CDS131171 936 + 0.277778
ribH Bfl235 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase beta chain)chromosome CDS250136 480 + 0.297917
serC Bfl383 phosphoserine aminotransferasechromosome CDS421058 1098 - 0.271403
trpE Bfl426 anthranilate synthase component Ichromosome CDS465508 1566 + 0.306513
trpG Bfl427 anthranilate synthase component IIchromosome CDS467081 582 + 0.292096
ubiA Bfl025 4-hydroxybenzoate octaprenyl transferasechromosome CDS28887 855 + 0.267836
ubiE Bfl622 ubiquinone/menaquinone biosynthesis methyltransferase UbiEchromosome CDS693105 765 - 0.262745
ubiF Bfl318 putative monooxygenasechromosome CDS352518 1194 + 0.278894
ubiG Bfl477 3-demethylubiquinone-9 3-methyltransferasechromosome CDS527499 738 + 0.280488
ubiH Bfl259 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS276061 1185 + 0.280169
ubiX Bfl375 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS412067 600 - 0.298333
ygfA Bfl257 putative ligasechromosome CDS274607 588 - 0.258503
yigC Bfl620 putative oxidoreductasechromosome CDS689299 1500 - 0.305333
 
Candidatus Blochmannia pennsylvanicus str. BPEN, BPEN
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
birA BPEN_190 biotin-[acetylCoA carboxylase] holoenzyme synthetasechromosome CDS239424 816 + 0.29902
coaA BPEN_191 pantothenate kinasechromosome CDS240388 942 - 0.278132
coaD BPEN_634 CMP-deoxy-D-manno-octulosonate-lipid A transferasechromosome CDS758957 516 + 0.294574
coaE BPEN_153 Dephospho-CoA kinasechromosome CDS189805 639 - 0.283255
cysD BPEN_167 ATP-sulfurylase, subunit 2chromosome CDS214767 915 + 0.335519
cysG BPEN_166 1,3-dimethyluroporphyriongen III dehydrogenasechromosome CDS213326 1425 + 0.330526
cysH BPEN_165 phosphoadenosine phosphosulfate reductasechromosome CDS212284 762 + 0.317585
dfp BPEN_637 4'-phosphopantothenoylcysteine decarboxylasechromosome CDS760593 1209 + 0.329198
dxs BPEN_244 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS274265 1875 - 0.343467
folA BPEN_128 dihydrofolate reductase type Ichromosome CDS156320 495 + 0.274747
folB BPEN_062 dihydroneopterin aldolase, also has dihydroneopterin triphosphatechromosome CDS73996 384 + 0.286458
folC BPEN_510 dihydrofolate synthasechromosome CDS610496 1275 - 0.331765
folD BPEN_313 5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS371401 861 - 0.329849
folE BPEN_487 GTP cyclohydrolase Ichromosome CDS581657 666 - 0.304805
folK BPEN_155 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinasechromosome CDS191738 495 + 0.341414
folP BPEN_102 7,8-dihydropteroate synthasechromosome CDS120501 840 + 0.352381
hemC BPEN_601 porphobilinogen deaminasechromosome CDS723951 903 + 0.327796
hemD BPEN_602 uroporphyrinogen-III synthetasechromosome CDS724900 750 + 0.313333
ilvC BPEN_609 ketol-acid reductoisomerasechromosome CDS729092 1476 - 0.317073
ilvE BPEN_612 branched-chain amino acid aminotransferasechromosome CDS734104 921 - 0.353963
ilvG BPEN_614 acetolactate synthase II large subunitchromosome CDS735323 1641 - 0.363803
ispA BPEN_245 geranyltranstransferasechromosome CDS276175 921 - 0.34202
ispB BPEN_095 octaprenyl-diphosphate synthasechromosome CDS113396 972 - 0.338477
lplA BPEN_368 lipoate-protein ligase Achromosome CDS435873 1020 + 0.335294
metK BPEN_259 S-adenosylmethionine synthetasechromosome CDS293740 1170 - 0.364957
pabA BPEN_588 aminodeoxychorismate synthase subunit IIchromosome CDS707069 582 - 0.345361
pabB BPEN_457 aminodeoxychorismate synthase subunit Ichromosome CDS542815 1389 + 0.311735
pabC BPEN_414 4-amino-4-deoxychorismate lyasechromosome CDS490159 822 - 0.311436
pdxA BPEN_131 pyridoxine phosphate biosynthetic protein PdxJ-PdxA subunit, NAD-dependent dehydrogenase/carboxylasechromosome CDS158972 1020 - 0.322549
pdxB BPEN_513 erythronate-4-phosphate dehydrogenasechromosome CDS614374 1125 - 0.316444
pdxH BPEN_381 pyridoxamine 5'-phosphate oxidasechromosome CDS447480 651 + 0.308756
pdxJ BPEN_559 pyridoxal phosphate biosynthetic proteinchromosome CDS668433 735 - 0.322449
ribA BPEN_437 GTP cyclohydrolase II proteinchromosome CDS515202 600 + 0.318333
ribB BPEN_067 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS79574 645 + 0.375194
ribD BPEN_240 pyrimidine deaminase/reductasechromosome CDS271407 1140 + 0.365789
ribE BPEN_377 riboflavin synthase subunit alphachromosome CDS444000 624 + 0.266026
ribF BPEN_121 bifunctional: flavokinase; FAD synthetasechromosome CDS145136 975 + 0.297436
ribH BPEN_241 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS272651 477 + 0.303983
serC BPEN_394 phosphoserine aminotransferasechromosome CDS463815 1089 - 0.310376
trpE BPEN_438 anthranilate synthase component Ichromosome CDS518841 1563 + 0.347409
trpG BPEN_439 anthranilate synthase component II: glutamine amidotransferasechromosome CDS520406 597 + 0.341709
ubiA BPEN_025 4-hydroxybenzoate octaprenyl transferasechromosome CDS30037 873 + 0.306987
ubiD BPEN_647 3-octaprenyl-4-hydroxybenzoate decarboxylasechromosome CDS773904 1464 - 0.346995
ubiE BPEN_649 2-octaprenyl-6-methoxy-1,4-benzoquinone methylasechromosome CDS777805 765 - 0.29281
ubiF BPEN_326 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenasechromosome CDS387214 1170 + 0.335897
ubiG BPEN_493 3-demethylubiquinone-9 3-methyltransferasechromosome CDS589738 693 + 0.327561
ubiH BPEN_266 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS302617 1191 + 0.307305
ubiX BPEN_386 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS454174 615 - 0.35122
visC BPEN_267 putative monooxygenase, FAD/NAD(P)-binding domainchromosome CDS303831 1224 + 0.293301
ygfA BPEN_264 putative ligasechromosome CDS300664 612 - 0.300654
 
Enterobacteria phage Fels-2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA STM4161 sulfur carrier protein ThiSchromosome CDS4378924 201 - 0.567164
NA STM0771 putative ABC-type cobalamin/Fe3+-siderophore transport componentchromosome CDS835496 777 + 0.563707
NA STM3350 putative inner membrane proteinchromosome CDS3517981 732 - 0.539617
NA STM0769 putative cytoplasmic proteinchromosome CDS833339 699 + 0.596566
NA STM2405 indolepyruvate decarboxylasechromosome CDS2520388 1653 - 0.591047
NA STM2922 putative 3-polyprenyl-4-hydroxybenzoate decarboxylasechromosome CDS3063775 1428 + 0.555322
NA STM2573 2-dehydropantoate 2-reductasechromosome CDS2718475 918 - 0.489107
NA STM0163 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS192411 984 + 0.556911
NA STM2921 putative flavoproteinchromosome CDS3063182 594 + 0.577441
NA STM1546 hypothetical proteinchromosome CDS1622640 1509 - 0.528827
NA STM2175 salicylate hydroxylasechromosome CDS2271771 1194 - 0.588777
NA STM4012 coproporphyrinogen III oxidasechromosome CDS4220856 1242 - 0.479871
acpT STM3583 putative phosphopantetheinyl transferasechromosome CDS3750673 579 + 0.588946
allP STM0522 putative allantoin transport proteinchromosome CDS582566 1314 + 0.459665
apbA STM0434 2-dehydropantoate 2-reductasechromosome CDS486780 912 - 0.526316
apbE STM2266 putative lipoproteinchromosome CDS2364276 1053 - 0.564103
asrB STM2549 anaerobic sulfite reductase subunit Bchromosome CDS2687490 819 + 0.555556
bioA STM0793 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS858794 1290 - 0.586822
bioB STM0794 biotin synthetasechromosome CDS860170 1041 + 0.551393
bioD STM0797 dithiobiotin synthetasechromosome CDS863096 687 + 0.590975
bioD STM1489 dithiobiotin synthetasechromosome CDS1566447 696 + 0.518678
bioF STM0795 8-amino-7-oxononanoate synthasechromosome CDS861207 1158 + 0.604491
birA STM4138 biotin--protein ligasechromosome CDS4357697 963 + 0.499481
btuB STM4130 outer membrane receptor protein precursorchromosome CDS4348110 1845 + 0.517615
btuC STM1340 vtamin B12-transporter permeasechromosome CDS1419571 981 + 0.593272
btuD STM1342 vitamin B12-transporter ATPasechromosome CDS1421194 750 + 0.565333
btuR STM1718 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS1815127 591 + 0.539763
cbiA STM2035 cobyrinic acid a,c-diamide synthasechromosome CDS2112422 1380 - 0.557971
cbiC STM2033 precorrin-8X methylmutasechromosome CDS2110823 633 - 0.554502
cbiD STM2032 cobalt-precorrin-6A synthasechromosome CDS2109684 1140 - 0.557018
cbiE STM2031 precorrin-6B methylasechromosome CDS2109085 606 - 0.577558
cbiF STM2029 vitamin B12 biosynthetic proteinchromosome CDS2107760 774 - 0.572351
cbiG STM2028 cobalamin biosynthesis protein CbiGchromosome CDS2106724 1056 - 0.556818
cbiH STM2027 precorrin-3B C17-methyltransferasechromosome CDS2105999 726 - 0.568871
cbiJ STM2026 precorrin-6x reductasechromosome CDS2105211 792 - 0.594697
cbiK STM2025 vitamin B12 biosynthetic proteinchromosome CDS2104414 795 - 0.557233
cbiL STM2024 precorrin-2 methyltransferasechromosome CDS2103704 714 - 0.578431
cbiP STM2019 cobyric acid synthasechromosome CDS2099682 1521 - 0.560158
cbiT STM2030 precorrin-8w decarboxylasechromosome CDS2108517 579 - 0.559586
citG STM0619 triphosphoribosyl-dephospho-CoA synthasechromosome CDS682406 897 - 0.606466
citG2 STM0063 triphosphoribosyl-dephospho-CoA synthasechromosome CDS72929 909 + 0.547855
citX STM0620 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyasechromosome CDS683274 552 - 0.619565
citX2 STM0062 putative cytoplasmic proteinchromosome CDS72400 552 + 0.559783
coaA STM4139 pantothenate kinasechromosome CDS4358694 951 - 0.45531
coaE STM0140 dephospho-CoA kinasechromosome CDS163207 621 - 0.549114
cobD STM2034 cobalamin biosynthesis proteinchromosome CDS2111466 960 - 0.590625
cobS STM2017 cobalamin synthasechromosome CDS2098400 744 - 0.564516
cobT STM2016 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2097303 1071 - 0.598506
cobU STM2018 adenosylcobinamide kinasechromosome CDS2099140 546 - 0.549451
cysD STM2935 sulfate adenylyltransferase subunit 2chromosome CDS3074391 909 - 0.530253
cysG STM3477 siroheme synthasechromosome CDS3627468 1374 + 0.580786
cysH STM2946 phosphoadenosine phosphosulfate reductasechromosome CDS3088189 735 - 0.564626
dfp STM3730 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS3923518 1224 + 0.550654
dxs STM0422 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS474630 1863 - 0.555556
entC STM0595 isochorismate synthasechromosome CDS656255 1176 + 0.582483
fepC STM0590 enterobactin transporterchromosome CDS650785 795 - 0.568553
fhuC STM0192 hydroxymate-dependent iron transport proteinchromosome CDS225976 798 + 0.588972
fimY STM0550 putative regulatory proteinchromosome CDS611492 723 - 0.46473
folA STM0087 dihydrofolate reductase type Ichromosome CDS100839 480 + 0.5375
folB STM3206 dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerasechromosome CDS3371486 363 - 0.498623
folC STM2365 multifunctional folylpolyglutamate synthasechromosome CDS2477354 1269 - 0.584712
folD STM0542 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS602702 867 - 0.544406
folE STM2193 GTP cyclohydrolase Ichromosome CDS2290444 669 - 0.526158
folK STM0183 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinasechromosome CDS213398 480 - 0.575
folP STM3295 7,8-dihydropteroate synthasechromosome CDS3463737 849 - 0.53828
gshA STM2818 glutamate--cysteine ligasechromosome CDS2966935 1557 - 0.521516
gshB STM3095 glutathione synthetasechromosome CDS3256939 948 + 0.545359
hemA STM1777 glutamyl-tRNA reductasechromosome CDS1874454 1257 - 0.567224
hemB STM0372 delta-aminolevulinic acid dehydratasechromosome CDS423678 975 - 0.553846
hemC STM3938 porphobilinogen deaminasechromosome CDS4145049 957 - 0.586207
hemD STM3937 uroporphyrinogen-III synthetasechromosome CDS4144312 741 - 0.576248
hemE STM4167 uroporphyrinogen decarboxylasechromosome CDS4384145 1065 + 0.575587
hemF STM2451 coproporphyrinogen III oxidasechromosome CDS2561205 900 + 0.573333
hemG STM3987 protoporphyrin oxidasechromosome CDS4195136 546 + 0.503663
hemH STM0489 ferrochelatasechromosome CDS546914 963 + 0.568017
hemL STM0202 glutamate-1-semialdehyde aminotransferasechromosome CDS237211 1281 - 0.593287
hemN STM4004 coproporphyrinogen III oxidasechromosome CDS4211171 1374 + 0.517467
hemX STM3936 uroporphyrinogen III methylasechromosome CDS4143121 1170 - 0.55641
hemY STM3935 heme biosynthetic proteinchromosome CDS4141922 1200 - 0.578333
ilvB STM3796 acetolactate synthase large subunitchromosome CDS3995917 1689 - 0.560687
ilvC STM3909 ketol-acid reductoisomerasechromosome CDS4117377 1476 + 0.566396
ilvE STM3903 branched-chain amino acid aminotransferasechromosome CDS4110897 930 + 0.545161
ilvG STM3901 acetolactate synthase II large subunitchromosome CDS4108973 1647 + 0.563449
ilvI STM0116 acetolactate synthase III large subunitchromosome CDS135898 1662 + 0.546931
ispA STM0423 geranyltranstransferasechromosome CDS476516 900 - 0.574444
ispB STM3305 octaprenyl diphosphate synthasechromosome CDS3473347 972 + 0.533951
kbl STM3709 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS3903917 1197 - 0.558897
kdtB STM3725 phosphopantetheine adenylyltransferasechromosome CDS3920624 480 + 0.527083
ldhA STM1647 D-lactate dehydrogenasechromosome CDS1740029 990 + 0.517172
lipA STM0633 lipoyl synthasechromosome CDS694862 966 - 0.548654
lipB STM0635.S lipoyltransferasechromosome CDS697288 642 - 0.498442
lplA STM4576 lipoate-protein ligase Achromosome CDS4831413 1017 - 0.567355
menA STM4090 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS4298154 930 - 0.555914
menB STM2307 naphthoate synthasechromosome CDS2413999 858 - 0.562937
menC STM2306 O-succinylbenzoate synthasechromosome CDS2413037 963 - 0.601246
menD STM2309 2-oxoglutarate decarboxylasechromosome CDS2415626 1671 - 0.594853
menF STM2310 menaquinone-specific isochorismate synthasechromosome CDS2417382 1296 - 0.568673
menG STM4089 ribonuclease activity regulator protein RraAchromosome CDS4297576 486 - 0.549383
metK STM3090 S-adenosylmethionine synthetasechromosome CDS3251693 1155 + 0.542857
moaA STM0802 molybdenum cofactor biosynthesis protein Achromosome CDS870638 990 + 0.541414
moaB STM0803 molybdopterin biosynthetic protein Bchromosome CDS871649 513 + 0.555556
moaC STM0804 molybdenum cofactor biosynthesis protein Cchromosome CDS872164 486 + 0.555556
moaD STM0805 molybdopterin biosynthetic proteinchromosome CDS872636 252 + 0.575397
moaE STM0806 molybdopterin converting factor subunit 2chromosome CDS872889 453 + 0.609272
mobA STM3994 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4202196 585 - 0.552137
mobB STM3993 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4201684 516 - 0.498062
moeA STM0846 molybdopterin biosynthesis proteinchromosome CDS915711 1242 - 0.57971
moeB STM0845 molybdopterin biosynthesis protein MoeBchromosome CDS914962 750 - 0.574667
mogA STM0008 molybdenum cofactor biosynthesis proteinchromosome CDS8729 591 + 0.56176
nadA STM0756 quinolinate synthetasechromosome CDS820233 1044 + 0.552682
nadB STM2641 L-aspartate oxidasechromosome CDS2780428 1623 + 0.551448
nadC STM0145 nicotinate-nucleotide pyrophosphorylasechromosome CDS168373 894 - 0.579418
nadD STM0645 nicotinic acid mononucleotide adenyltransferasechromosome CDS706846 642 - 0.548287
nadE STM1310 NAD(+) synthetasechromosome CDS1390119 828 - 0.530193
nadR STM4580.S nicotinamide-nucleotide adenylyltransferasechromosome CDS4835782 1260 + 0.507937
pabA STM3469 para-aminobenzoate synthase component IIchromosome CDS3619759 564 - 0.551418
pabB STM1824 para-aminobenzoate synthase component Ichromosome CDS1921169 1365 + 0.552381
pabC STM1198 4-amino-4-deoxychorismate lyasechromosome CDS1281800 810 + 0.514815
panB STM0182 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS212486 792 - 0.573232
panC STM0181 pantoate--beta-alanine ligasechromosome CDS211506 855 - 0.545029
panD STM0180 aspartate 1-decarboxylase precursorchromosome CDS211031 381 - 0.535433
panF STM3382 sodium/panthothenate symporterchromosome CDS3552266 1452 + 0.552342
pdxA STM0091 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS103481 990 - 0.586869
pdxB STM2370 erythronate-4-phosphate dehydrogenasechromosome CDS2482355 1137 - 0.566403
pdxH STM1448 pyridoxamine 5'-phosphate oxidasechromosome CDS1522704 657 + 0.550989
pdxJ STM2578 pyridoxal phosphate biosynthetic proteinchromosome CDS2722442 732 - 0.575137
pdxK STM2435 pyridoxine kinasechromosome CDS2547554 867 - 0.570934
pdxY STM1450 pyridoxine kinasechromosome CDS1524821 861 + 0.5482
pncB STM1004 nicotinate phosphoribosyltransferasechromosome CDS1096831 1203 - 0.544472
pnuC STM0757 nucleoside/purine/pyrimidine transporterchromosome CDS821301 720 + 0.506944
poxB STM0935 pyruvate dehydrogenasechromosome CDS1010107 1719 - 0.570681
ptpS STM2949 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS3092934 363 + 0.528926
rfbI STM2093 CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS2174120 993 - 0.404834
ribA STM1711 GTP cyclohydrolase II proteinchromosome CDS1804109 591 + 0.500846
ribB STM3195 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3357851 654 - 0.561162
ribD STM0416 pyrimidine deaminase/reductasechromosome CDS469844 1104 + 0.603261
ribE STM1426 riboflavin synthase subunit alphachromosome CDS1503552 642 + 0.515576
ribF STM0045 hypothetical proteinchromosome CDS52872 939 + 0.567625
ribH STM0417 riboflavin synthase subunit betachromosome CDS471036 471 + 0.543524
rimK STM0875 ribosomal protein S6 modification proteinchromosome CDS946561 903 + 0.563677
serA STM3062 D-3-phosphoglycerate dehydrogenasechromosome CDS3223279 1233 - 0.553934
serC STM0977 phosphoserine aminotransferasechromosome CDS1061475 1089 + 0.536272
tbpA STM0108 thiamine-binding periplasmic proteinchromosome CDS125687 984 - 0.549797
thiC STM4164 thiamine biosynthesis protein ThiCchromosome CDS4380491 1896 - 0.580696
thiD STM2146 phosphomethylpyrimidine kinasechromosome CDS2240261 801 - 0.605493
thiE STM4163 thiamine-phosphate pyrophosphorylasechromosome CDS4379856 636 - 0.595912
thiF STM4162 thiamine biosynthesis protein ThiFchromosome CDS4379105 759 - 0.578393
thiG STM4160 thiazole synthasechromosome CDS4378152 771 - 0.614786
thiH STM4159 thiamine biosynthesis protein ThiHchromosome CDS4377022 1134 - 0.544092
thiL STM0419 thiamine monophosphate kinasechromosome CDS472025 978 + 0.56544
thiM STM2147 hydroxyethylthiazole kinasechromosome CDS2241048 798 - 0.610276
trpD STM1724 anthranilate phosphoribosyltransferasechromosome CDS1820112 1596 + 0.573308
trpE STM1723 anthranilate synthase component Ichromosome CDS1818550 1563 + 0.579655
ubiA STM4234 4-hydroxybenzoate octaprenyltransferasechromosome CDS4455210 873 + 0.547537
ubiB STM3979 NAD(P)H-flavin reductasechromosome CDS4185162 702 + 0.529915
ubiC STM4233 chorismate pyruvate lyasechromosome CDS4454699 498 + 0.542169
ubiE STM3970 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4177291 756 + 0.481481
ubiF STM0671 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS736055 1176 + 0.59949
ubiG STM2276 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2380316 729 + 0.550069
ubiH STM3057 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3218465 1179 - 0.609839
ubiX STM2356 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2466582 570 - 0.550877
visC STM3056 hypothetical proteinchromosome CDS3217137 1203 - 0.572735
yabJ STM0106 putative ABC transporter proteinchromosome CDS123410 708 - 0.580508
ycdW STM1135 putative oxidoreductasechromosome CDS1225066 939 + 0.550586
yfeK STM2438 putative periplasmic proteinchromosome CDS2550588 381 + 0.493438
ygdL STM2987 putative enzymechromosome CDS3138843 807 - 0.560099
ygfA STM3061 putative ligasechromosome CDS3222350 549 + 0.575592
yggW STM3104 coproporphyrinogen III oxidasechromosome CDS3263114 1137 + 0.546174
yiaE STM3646 2-hydroxyacid dehydrogenasechromosome CDS3833687 975 + 0.568205
yieE STM3849 putative cytoplasmic proteinchromosome CDS4056350 756 + 0.531746
yigC STM3978 putative oxidoreductasechromosome CDS4183598 1479 + 0.538202
 
Erwinia carotovora subsp. atroseptica SCRI1043, SCRI1043
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECA1426 putative thiamine pyrophosphate enzymechromosome CDS1618722 1797 + 0.469672
NA ECA2876 putative phage-related proteinchromosome CDS3220532 840 + 0.411905
NA ECA1923 riboflavin synthase subunit alphachromosome CDS2181519 636 + 0.509434
NA ECA1970 putative thiamine biosynthesis proteinchromosome CDS2237016 972 + 0.476337
NA ECA2981 hypothetical proteinchromosome CDS3330105 2058 + 0.506803
NA ECA1579 2-dehydropantoate 2-reductasechromosome CDS1834370 891 + 0.563412
NA ECA4463 hypothetical proteinchromosome CDS5008470 744 + 0.522849
NA ECA0557 hypothetical proteinchromosome CDS624609 522 + 0.5
NA ECA3009 coproporphyrinogen III oxidasechromosome CDS3361374 1314 - 0.556317
NA ECA1070 putative 3-polyprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS1199330 1425 + 0.506667
NA ECA3760 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS4199670 981 - 0.552497
NA ECA4254 putative iron(III) ABC transporter ATP-binding proteinchromosome CDS4767603 798 + 0.572682
NA ECA2357 putative kinasechromosome CDS2668763 534 + 0.417603
NA ECA3553 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS3984884 417 + 0.501199
NA ECA0462 putative 5-formyltetrahydrofolate cyclo-ligasechromosome CDS526894 627 + 0.550239
NA ECA2628 conserved phage proteinchromosome CDS2961047 1029 - 0.495627
NA ECA3094 ABC transporter ATP-binding proteinchromosome CDS3454008 771 - 0.546044
NA ECA2971 putative branched-chain amino acid aminotransferasechromosome CDS3321890 918 + 0.550109
NA ECA0522 hypothetical proteinchromosome CDS596187 615 + 0.458537
NA ECA3243 putative ferric-enterobactin ABC transporter ATP-binding proteinchromosome CDS3626100 801 + 0.548065
NA ECA1010 hypothetical proteinchromosome CDS1134065 819 + 0.542125
NA ECA3632 coproporphyrinogen III oxidasechromosome CDS4080027 1140 + 0.568421
NA ECA4066 para-aminobenzoate synthase component IIchromosome CDS4531245 576 - 0.510417
NA ECA0869 hypothetical proteinchromosome CDS962609 858 + 0.522144
NA ECA0112 hypothetical proteinchromosome CDS131919 1287 + 0.574981
NA ECA3947 putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS4418704 927 - 0.539374
KdtB ECA0150 phosphopantetheine adenylyltransferasechromosome CDS170375 480 - 0.49375
apbE ECA1854 thiamine biosynthesis lipoproteinchromosome CDS2105019 1047 - 0.520535
bioA ECA2826 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS3166195 1305 + 0.549425
bioB ECA2825 biotin synthasechromosome CDS3165062 1038 - 0.531792
bioD ECA2257 dithiobiotin synthetasechromosome CDS2556274 666 - 0.525526
bioD ECA2822 dithiobiotin synthetasechromosome CDS3162450 681 - 0.544787
bioF ECA2824 8-amino-7-oxononanoate synthasechromosome CDS3163865 1158 - 0.585492
birA ECA0214 biotin--protein ligasechromosome CDS247002 960 + 0.425
btuB ECA4238 vitamin B12 receptor precursorchromosome CDS4748153 1848 - 0.474026
btuC ECA1832 vtamin B12-transporter permeasechromosome CDS2078193 996 + 0.549197
btuD ECA1834 vitamin B12-transporter ATPasechromosome CDS2079817 753 + 0.594954
btuR ECA2290 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS2595969 591 + 0.526227
budB ECA0741 alpha-acetolactate synthasechromosome CDS809514 1680 + 0.541071
cbrD ECA2806 achromobactin transport ATP-binding proteinchromosome CDS3147401 840 - 0.552381
citG ECA2569 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthasechromosome CDS2899810 906 - 0.562914
citX ECA2570 apo-citrate lyase phosphoribosyl-dephospho-CoA transferasechromosome CDS2900693 528 - 0.570076
coaA ECA0215 pantothenate kinasechromosome CDS247989 951 - 0.398528
coaE ECA3802 dephospho-CoA kinasechromosome CDS4250722 627 + 0.5311
cysD ECA3543 sulfate adenylyltransferase subunit 2chromosome CDS3969465 909 - 0.544554
cysG1 ECA3544 siroheme synthase [includes: uroporphyrin-III C-methyltransferase; precorrin-2 oxidase; ferrochelatase]chromosome CDS3970383 1443 - 0.5842
cysG2 ECA4081 siroheme synthase [includes: uroporphyrin-III C-methyltransferase; precorrin-2 oxidase; ferrochelatase]chromosome CDS4549962 1380 + 0.546377
cysH ECA3545 phosphoadenosine phosphosulfate reductasechromosome CDS3972135 735 - 0.559184
dat ECA3117 D-alanine aminotransferasechromosome CDS3479267 861 + 0.505226
dfp ECA0144 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS165547 1278 - 0.545383
dhpS ECA0699 dihydropteroate synthasechromosome CDS770241 834 + 0.521583
dxs ECA1131 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS1282733 1866 - 0.530547
ehpC ECA2701 putative phenazine antibiotic biosynthesis proteinchromosome CDS3036349 1878 - 0.492545
ehpE ECA2698 putative phenazine antibiotic biosynthesis proteinchromosome CDS3034530 639 - 0.525822
entC ECA0477 isochorismate synthasechromosome CDS543754 1197 + 0.535505
fecE ECA1073 iron(III) dicitrate transport ATP-binding proteinchromosome CDS1201900 768 - 0.561198
fhuC ECA3312 ferrichrome transport ATP-binding proteinchromosome CDS3721339 798 - 0.571429
folA ECA3864 dihydrofolate reductasechromosome CDS4323391 483 - 0.534162
folB ECA3590 dihydroneopterin aldolasechromosome CDS4036671 357 - 0.521008
folC ECA3055 bifunctional protein [includes: folylpolyglutamate synthase and dihydrofolate synthase]chromosome CDS3411257 1269 - 0.550827
folD ECA3149 bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase]chromosome CDS3516455 864 + 0.530093
folE ECA2711 GTP cyclohydrolase Ichromosome CDS3045672 663 - 0.505279
folK ECA3320 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS3732230 498 + 0.556225
folX ECA3045 D-erythro-7,8-dihydroneopterin triphosphate epimerasechromosome CDS3402596 372 + 0.456989
fre ECA0206 NAD(P)H-flavin reductasechromosome CDS231891 702 + 0.507123
gshA ECA3363 glutamate--cysteine ligasechromosome CDS3777940 1554 - 0.501287
gshB ECA3924 glutathione synthetasechromosome CDS4392301 960 + 0.5375
hemA ECA2189 glutamyl-tRNA reductasechromosome CDS2491599 1257 + 0.536993
hemB ECA0203 delta-aminolevulinic acid dehydratasechromosome CDS228573 1023 + 0.528837
hemC ECA4188 porphobilinogen deaminasechromosome CDS4680620 942 + 0.564756
hemD ECA4189 uroporphyrinogen-III synthetasechromosome CDS4681558 741 + 0.54386
hemE ECA0235 uroporphyrinogen decarboxylasechromosome CDS275283 1065 + 0.532394
hemF ECA0874 coproporphyrinogen III oxidasechromosome CDS969369 933 - 0.550911
hemG ECA0212 protoporphyrinogen oxidasechromosome CDS239695 540 + 0.47963
hemH ECA1181 ferrochelatasechromosome CDS1336525 963 + 0.550363
hemL ECA3307 glutamate-1-semialdehyde aminotransferasechromosome CDS3714803 1281 + 0.571429
hemN ECA0026 coproporphyrinogen III oxidasechromosome CDS30749 1374 + 0.502183
hemX ECA4190 putative uroporphyrin-III C-methyltransferasechromosome CDS4682322 1125 + 0.553778
hemY ECA4191 porphyrin biosynthetic proteinchromosome CDS4683449 1194 + 0.551089
hprA ECA2721 glycerate dehydrogenasechromosome CDS3057901 990 - 0.513131
ilvB ECA3848 acetolactate synthase large subunitchromosome CDS4302196 1665 + 0.566967
ilvC ECA4221 ketol-acid reductoisomerasechromosome CDS4722380 1479 - 0.532792
ilvE ECA4227 branched-chain amino acid aminotransferasechromosome CDS4730043 927 - 0.539374
ilvG ECA4229 acetolactate synthase II large subunitchromosome CDS4731332 1647 - 0.546448
ilvI ECA3829 acetolactate synthase III large subunitchromosome CDS4277864 1719 - 0.536358
ipdC ECA3605 indole-3-pyruvate decarboxylasechromosome CDS4054763 1668 + 0.543765
ispA ECA1132 geranyltranstransferasechromosome CDS1284617 912 - 0.542763
ispB ECA0689 octaprenyl-diphosphate synthasechromosome CDS760380 972 - 0.504115
kbl ECA0167 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS186786 1197 + 0.544695
ldhA ECA2000 D-lactate dehydrogenasechromosome CDS2266640 993 - 0.531722
lipA ECA1297 lipoyl synthasechromosome CDS1469462 966 - 0.541408
lipB ECA1298 lipoyltransferasechromosome CDS1470655 684 - 0.535088
menA ECA4263 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS4777900 918 + 0.533769
menB ECA1213 naphthoate synthasechromosome CDS1381835 858 + 0.545455
menC ECA1214 O-succinylbenzoate synthasechromosome CDS1382692 972 + 0.584362
menD ECA1211 2-oxoglutarate decarboxylasechromosome CDS1379359 1683 + 0.595365
menF ECA1210 menaquinone-specific isochorismate synthasechromosome CDS1377747 1323 + 0.5548
menG ECA4264 ribonuclease activity regulator protein RraAchromosome CDS4778952 486 + 0.528807
metK ECA3920 S-adenosylmethionine synthetasechromosome CDS4388480 1152 + 0.530382
moaA ECA2817 molybdenum cofactor biosynthesis protein Achromosome CDS3156435 990 - 0.530303
moaB ECA2816 molybdenum cofactor biosynthesis protein Bchromosome CDS3155882 519 - 0.539499
moaC ECA2815 molybdenum cofactor biosynthesis protein Cchromosome CDS3155369 495 - 0.573737
moaD ECA2814 molybdopterin converting factor subunit 1chromosome CDS3155127 246 - 0.52439
moaE ECA2813 molybdopterin converting factor subunit 2chromosome CDS3154672 453 - 0.560706
mobA ECA0017 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS22674 591 - 0.468697
mobB ECA0016 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS22163 522 - 0.442529
moeA ECA2836 molybdopterin biosynthesis proteinchromosome CDS3178804 1236 + 0.575243
moeB ECA2837 molybdopterin biosynthesis protein MoeBchromosome CDS3180042 753 + 0.551129
mogA ECA3885 molybdenum cofactor biosynthesis proteinchromosome CDS4348133 588 - 0.534014
nadA ECA1378 quinolinate synthetasechromosome CDS1558773 1062 + 0.541431
nadB ECA3285 L-aspartate oxidasechromosome CDS3689812 1602 + 0.529963
nadC ECA3797 nicotinate-nucleotide pyrophosphorylasechromosome CDS4244964 891 + 0.533109
nadD ECA1306 nicotinic acid mononucleotide adenyltransferasechromosome CDS1478437 642 - 0.554517
nadE ECA2412 NAD(+) synthetasechromosome CDS2724246 825 + 0.501818
nadR ECA0463 nicotinamide-nucleotide adenylyltransferasechromosome CDS527517 1254 - 0.494418
nirE ECA2989 uroporphyrin-III C-methyltransferasechromosome CDS3335911 834 - 0.601918
pabB ECA2378 para-aminobenzoate synthase component Ichromosome CDS2688488 1455 + 0.537457
pabC ECA1800 4-amino-4-deoxychorismate lyasechromosome CDS2046622 798 + 0.522556
panB ECA3321 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS3732844 795 + 0.542138
panC ECA3322 pantoate--beta-alanine ligasechromosome CDS3733793 855 + 0.532164
panD ECA3323 aspartate 1-decarboxylase precursorchromosome CDS3734665 381 + 0.532808
panE ECA1136 2-dehydropantoate 2-reductasechromosome CDS1288064 909 - 0.530253
panF ECA0259 sodium/panthothenate symporterchromosome CDS303438 1452 - 0.556474
pdxA ECA3858 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS4318033 1002 + 0.545908
pdxB ECA3060 erythronate-4-phosphate dehydrogenasechromosome CDS3416595 1137 - 0.558487
pdxH ECA1935 pyridoxamine 5'-phosphate oxidasechromosome CDS2191939 684 + 0.532164
pdxJ ECA3275 pyridoxal phosphate biosynthetic proteinchromosome CDS3680225 732 - 0.536885
pdxY ECA1937 pyridoxine kinasechromosome CDS2194218 861 + 0.54007
pncB ECA2540 nicotinate phosphoribosyltransferasechromosome CDS2862696 1206 + 0.516584
pnuC ECA1379 nicotinamide mononucleotide transport proteinchromosome CDS1559893 726 + 0.490358
rfbI ECA1421 CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS1613498 960 + 0.4
ribA ECA1943 GTP cyclohydrolase II proteinchromosome CDS2202874 594 - 0.515152
ribB ECA0899 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS1002298 654 + 0.555046
ribD ECA1126 riboflavin biosynthesis proteinchromosome CDS1278982 1110 + 0.569369
ribF ECA3877 hypothetical proteinchromosome CDS4338213 942 - 0.526539
ribH ECA1127 riboflavin synthase subunit betachromosome CDS1280201 477 + 0.501048
rimK ECA2679 ribosomal protein S6 modification proteinchromosome CDS3014433 912 - 0.528509
serA ECA3905 D-3-phosphoglycerate dehydrogenasechromosome CDS4371418 1233 - 0.525547
serC ECA2594 phosphoserine aminotransferasechromosome CDS2928085 1086 - 0.523941
tbpA ECA3844 thiamine-binding periplasmic protein precursorchromosome CDS4296705 1065 + 0.54554
thiC ECA0232 thiamine biosynthesis protein ThiCchromosome CDS271446 1995 - 0.552882
thiD ECA3196 phosphomethylpyrimidine kinasechromosome CDS3576767 804 - 0.593284
thiE ECA0231 thiamine-phosphate pyrophosphorylasechromosome CDS270808 642 - 0.571651
thiF ECA0230 thiamine biosynthesis protein ThiFchromosome CDS270027 780 - 0.589744
thiG ECA0229 thiazole synthasechromosome CDS269043 786 - 0.589059
thiH ECA0228 thiamine biosynthesis protein ThiHchromosome CDS267925 1122 - 0.534759
thiL ECA1129 thiamine monophosphate kinasechromosome CDS1281190 981 + 0.530071
thiM ECA3197 hydroxyethylthiazole kinasechromosome CDS3577567 795 - 0.583648
thiQ ECA3846 thiamine transport ATP-binding proteinchromosome CDS4299357 693 + 0.559885
thiS ECA0229A sulfur carrier protein ThiSchromosome CDS269830 201 - 0.507463
tkrA ECA0078 2-hydroxyacid dehydrogenasechromosome CDS92960 966 - 0.549689
trpE ECA2296 anthranilate synthase component Ichromosome CDS2602958 1563 + 0.570697
trpG ECA2297 anthranilate synthase component IIchromosome CDS2604520 579 + 0.590674
ubiA ECA0627 4-hydroxybenzoate octaprenyltransferasechromosome CDS699974 864 + 0.513889
ubiC ECA0626 chorismate-pyruvate lyasechromosome CDS699428 534 + 0.529963
ubiD ECA0205 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS230345 1497 + 0.536406
ubiE ECA0196 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS222967 756 + 0.503968
ubiF ECA1320 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS1494007 1167 + 0.55527
ubiG ECA1200 3-demethylubiquinone-9 3-methyltransferasechromosome CDS1362525 726 - 0.546832
ubiX ECA3051 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS3407589 573 - 0.527051
visB ECA0458 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS522816 1179 - 0.59542
visC ECA0457 hypothetical proteinchromosome CDS521576 1212 - 0.566007
 
Escherichia coli 536, 536
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECP_0161 ferrichrome transport ATP-binding protein FhuCchromosome CDS175125 798 + 0.56391
NA ECP_2442 pyridoxine kinasechromosome CDS2558322 852 - 0.518779
NA ECP_3884 putative sodium:solute symporterchromosome CDS4046269 1716 - 0.530886
NA ECP_1258 glutamyl-tRNA reductasechromosome CDS1286752 1257 + 0.533811
NA ECP_0432 delta-aminolevulinic acid dehydratasechromosome CDS457404 1008 - 0.534722
NA ECP_0645 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferasechromosome CDS681943 552 - 0.585145
NA ECP_0762 Intergral membrane NMN transport protein PnuCchromosome CDS797989 720 + 0.480556
NA ECP_2257 thiamine biosynthesis lipoprotein ApbE precursorchromosome CDS2347503 1056 - 0.530303
NA ECP_0071 thiamine-binding periplasmic protein precursorchromosome CDS77039 984 - 0.518293
NA ECP_4138 S-adenosylmethionine:2-demethylmenaquinone methyltransferasechromosome CDS4318249 486 - 0.522634
NA ECP_4139 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4318827 927 - 0.535059
NA ECP_2977 regulatory proteinchromosome CDS3144137 1272 - 0.498428
NA ECP_0536 ferrochelatasechromosome CDS565192 963 + 0.535826
NA ECP_2275 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2376616 723 + 0.543568
NA ECP_3264 dihydropteroate synthasechromosome CDS3434510 849 - 0.512367
NA ECP_4271 hypothetical proteinchromosome CDS4477827 558 + 0.530466
NA ECP_0476 thiamine-monophosphate kinasechromosome CDS502986 978 + 0.54908
NA ECP_0839 molybdopterin biosynthesis protein MoeBchromosome CDS878531 750 - 0.553333
NA ECP_3570 4'-phosphopantetheinyl transferase AcpTchromosome CDS3732981 588 + 0.568027
NA ECP_3831 putative phosphoadenosine phosphosulfate reductase familychromosome CDS4001753 1233 + 0.513382
NA ECP_3994 HemY proteinchromosome CDS4169536 1197 - 0.550543
NA ECP_2739 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2877696 366 + 0.491803
NA ECP_2922 hypothetical protein YggCchromosome CDS3090479 714 - 0.52521
NA ECP_0918 phosphoserine aminotransferasechromosome CDS968212 1089 + 0.495868
NA ECP_2736 phosphoadenosine phosphosulfate reductasechromosome CDS2873061 735 - 0.511565
NA ECP_4202 thiazole biosynthesis protein ThiHchromosome CDS4401652 1134 - 0.544974
NA ECP_4057 NAD(P)H-flavin reductasechromosome CDS4232487 702 + 0.522792
NA ECP_2308 menaquinone biosynthesis protein menDchromosome CDS2414399 1860 - 0.566667
NA ECP_0485 2-dehydropantoate 2-reductasechromosome CDS510832 912 - 0.516447
NA ECP_4048 ubiquinone/menaquinone biosynthesis methyltransferase UbiEchromosome CDS4224812 756 + 0.519841
NA ECP_4299 putative symporter YjcGchromosome CDS4508793 1650 - 0.553333
NA ECP_3063 hypothetical aminotransferase, class IIchromosome CDS3228199 1173 + 0.519182
NA ECP_4272 hypothetical proteinchromosome CDS4478381 1005 + 0.520398
NA ECP_0658 lipoic acid synthetasechromosome CDS693712 966 - 0.534162
NA ECP_1982 probable 4'-phosphopantetheinyl transferasechromosome CDS2067001 735 + 0.341497
NA ECP_2342 D-erythro-7,8-dihydroneopterin triphosphate epimerasechromosome CDS2452612 363 + 0.446281
NA ECP_0685 putative monooxygenasechromosome CDS721892 1176 + 0.559524
NA ECP_1378 putative mandelate racemase/muconate lactonizing enzyme family proteinchromosome CDS1410347 966 + 0.545549
NA ECP_1937 probable salicylate synthetase YbtSchromosome CDS1972774 1305 - 0.55249
NA ECP_0795 molybdenum cofactor biosynthesis protein Achromosome CDS832889 1023 + 0.531769
NA ECP_1755 para-aminobenzoate synthase component Ichromosome CDS1806655 1362 + 0.510279
NA ECP_3274 octaprenyl-diphosphate synthasechromosome CDS3444013 972 + 0.526749
NA ECP_2305 O-succinylbenzoate-CoA synthasechromosome CDS2411810 963 - 0.590862
NA ECP_0139 aspartate 1-decarboxylase precursorchromosome CDS151430 381 - 0.530184
NA ECP_4257 4-hydroxybenzoate octaprenyltransferasechromosome CDS4464844 873 + 0.515464
NA ECP_2290 hypothetical protein YfaW (putative racemase)chromosome CDS2397018 1218 - 0.514778
NA ECP_2193 GTP cyclohydrolase Ichromosome CDS2283852 669 - 0.508221
NA ECP_2734 sulfate adenylyltransferase subunit 2chromosome CDS2870321 909 - 0.533553
NA ECP_4187 BirAchromosome CDS4385040 966 + 0.491718
NA ECP_0048 dihydrofolate reductasechromosome CDS51368 480 + 0.53125
NA ECP_0796 molybdenum cofactor biosynthesis protein Bchromosome CDS833933 513 + 0.526316
NA ECP_0054 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS54533 969 - 0.560372
NA ECP_3878 acetolactate synthase isozyme I large subunitchromosome CDS4040041 1689 - 0.563055
NA ECP_0792 dethiobiotin synthetasechromosome CDS828302 678 + 0.539823
NA ECP_2309 menaquinone-specific isochorismate synthasechromosome CDS2416158 1296 - 0.530864
NA ECP_3601 putative oxygen independent coproporphyrinogen III oxidasechromosome CDS3765330 1338 + 0.523916
NA ECP_4207 thiamine biosynthesis protein ThiCchromosome CDS4405121 1896 - 0.55116
NA ECP_2350 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2459344 570 - 0.52807
NA ECP_0660 lipoate-protein ligase Bchromosome CDS695497 642 - 0.476636
NA ECP_2398 probable oxalyl-CoA decarboxylasechromosome CDS2513691 1695 - 0.470206
NA ECP_3997 porphobilinogen deaminasechromosome CDS4172693 963 - 0.568017
NA ECP_0788 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS824000 1401 - 0.551749
NA ECP_4188 pantothenate kinasechromosome CDS4386034 972 - 0.440329
NA ECP_1701 hypothetical ABC transporter permease protein YnjCchromosome CDS1749877 1536 + 0.565104
NA ECP_0069 thiamine transport ATP-binding protein ThiQchromosome CDS74771 699 - 0.569385
NA ECP_1609 riboflavin synthase alpha chainchromosome CDS1657559 642 - 0.478193
NA ECP_0797 molybdenum cofactor biosynthesis protein Cchromosome CDS834448 486 + 0.561728
NA ECP_3118 putative iron compound permease protein of ABC transporter familychromosome CDS3283156 1050 - 0.507619
NA ECP_3459 siroheme synthasechromosome CDS3609487 1374 + 0.533479
NA ECP_0644 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthasechromosome CDS681090 879 - 0.555176
NA ECP_1686 NH(3)-dependent NAD(+) synthetasechromosome CDS1735124 828 + 0.498792
NA ECP_3351 sodium/pantothenate symporterchromosome CDS3517497 1452 + 0.544077
NA ECP_1330 GTP cyclohydrolase IIchromosome CDS1361664 591 - 0.497462
NA ECP_1584 pyridoxamine 5'-phosphate oxidasechromosome CDS1636713 657 - 0.515982
NA ECP_0620 ferric enterobactin transport ATP-binding protein FepCchromosome CDS655512 816 - 0.545343
NA ECP_1319 COB(I)alamin adenosyltransferasechromosome CDS1350875 591 - 0.49577
NA ECP_3718 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS3899012 1197 - 0.541353
NA ECP_4066 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4246599 528 - 0.492424
NA ECP_2033 putative ABC transporterchromosome CDS2102508 768 - 0.566406
NA ECP_1242 iron ABC transporter, ATP-binding proteinchromosome CDS1268954 759 - 0.536232
NA ECP_0473 riboflavin biosynthesis protein RibDchromosome CDS500825 1086 + 0.549724
NA ECP_0479 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS505542 1863 - 0.537305
NA ECP_3962 acetolactate synthase isozyme II large subunitchromosome CDS4134350 1647 + 0.540376
NA ECP_0790 8-amino-7-oxononanoate synthasechromosome CDS826413 1155 + 0.574892
NA ECP_0635 hypothetical protein YbdNchromosome CDS671220 1221 - 0.464373
NA ECP_2306 naphthoate synthasechromosome CDS2412772 858 - 0.545455
NA ECP_3604 putative permease of iron compound ABC transport systemchromosome CDS3767882 957 + 0.527691
NA ECP_1659 vitamin B12 transport system permease protein BtuCchromosome CDS1708958 981 - 0.549439
NA ECP_0590 FolDchromosome CDS619837 867 - 0.546713
NA ECP_4205 adenylyltransferase ThiFchromosome CDS4403738 756 - 0.562169
NA ECP_3605 putative ATP-binding protein of ABC transport systemchromosome CDS3768835 771 + 0.490272
NA ECP_1312 anthranilate synthase component Ichromosome CDS1342969 1563 - 0.540627
NA ECP_2935 S-adenosylmethionine synthetasechromosome CDS3104511 1155 + 0.530736
NA ECP_0163 ferrichrome transport system permease protein FhuBchromosome CDS176809 1983 + 0.601109
NA ECP_2142 hydroxyethylthiazole kinasechromosome CDS2225009 789 - 0.551331
NA ECP_0023 riboflavin kinasechromosome CDS22950 942 + 0.527601
NA ECP_1406 D-lactate dehydrogenasechromosome CDS1440242 990 - 0.50303
NA ECP_0761 quinolinate synthetase Achromosome CDS796908 1044 + 0.506705
NA ECP_2769 glucarate dehydratase related proteinchromosome CDS2912814 1341 - 0.53915
NA ECP_0669 nicotinate-nucleotide adenylyltransferasechromosome CDS703792 642 - 0.492212
NA ECP_4256 chorismate-pyruvate lyasechromosome CDS4464334 498 + 0.524096
NA ECP_0622 ferric enterobactin transport system permease protein FepDchromosome CDS657313 1017 - 0.60177
NA ECP_2457 coproporphyrinogen III oxidase, aerobicchromosome CDS2571817 900 + 0.547778
NA ECP_0798 molybdopterin converting factor subunit 1chromosome CDS834926 246 + 0.560976
NA ECP_4067 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4247108 576 - 0.505208
NA ECP_3119 putative iron compound permease protein of ABC transporter familychromosome CDS3284202 984 - 0.539634
NA ECP_1529 starvation sensing protein RspAchromosome CDS1579738 1215 - 0.509465
NA ECP_3732 phosphopantetheine adenylyltransferasechromosome CDS3914295 480 + 0.522917
NA ECP_0480 geranyltranstransferasechromosome CDS507429 900 - 0.54
NA ECP_3451 para-aminobenzoate synthase glutamine amidotransferase component IIchromosome CDS3601925 564 - 0.524823
NA ECP_1088 4-amino-4-deoxychorismate lyasechromosome CDS1144178 810 + 0.506173
NA ECP_0866 ribosomal protein S6 modification proteinchromosome CDS906118 903 + 0.560354
NA ECP_4056 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS4230945 1497 + 0.534402
NA ECP_4204 ThiS proteinchromosome CDS4403554 201 - 0.517413
NA ECP_3136 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3302540 654 - 0.524465
NA ECP_0568 glyoxylate carboligasechromosome CDS596620 1782 + 0.529742
NA ECP_4774 transcriptional regulator NadRchromosome CDS4924188 1233 + 0.502839
NA ECP_2899 protein VisCchromosome CDS3068977 1203 - 0.547797
NA ECP_2141 phosphomethylpyrimidine kinasechromosome CDS2224212 801 - 0.546816
NA ECP_0698 putative pyridoxine phosphate biosynthetic proteinchromosome CDS739470 987 + 0.518744
NA ECP_0789 biotin synthasechromosome CDS825376 1041 + 0.554275
NA ECP_3120 ferric enterobactin transport ATP-binding protein FepCchromosome CDS3285182 810 - 0.495062
NA ECP_0840 molybdopterin biosynthesis protein MoeAchromosome CDS879280 1236 - 0.564725
NA ECP_4174 starvation sensing protein RspAchromosome CDS4365100 1275 + 0.493333
NA ECP_0886 pyruvate dehydrogenasechromosome CDS923238 1719 - 0.535195
NA ECP_0010 molybdopterin biosynthesis mog proteinchromosome CDS9205 588 + 0.540816
NA ECP_2904 putative 5-formyltetrahydrofolate cyclo-ligase-family proteinchromosome CDS3073905 747 + 0.526104
NA ECP_3996 uroporphyrinogen-III synthase HemDchromosome CDS4171956 741 - 0.534413
NA ECP_1243 iron(III) ABC transporter, permease proteinchromosome CDS1269709 981 - 0.544343
NA ECP_1537 putative dethiobiotin synthetasechromosome CDS1585955 696 - 0.521552
NA ECP_2768 glucarate dehydratasechromosome CDS2911453 1341 - 0.536913
NA ECP_0474 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS501999 471 + 0.52017
NA ECP_0799 molybdopterin converting factor subunit 2chromosome CDS835173 453 + 0.560706
NA ECP_1657 vitamin B12 transport ATP-binding protein BtuDchromosome CDS1707596 750 - 0.552
NA ECP_1989 nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2070753 1080 - 0.512037
NA ECP_3148 dihydroneopterin aldolasechromosome CDS3315907 369 - 0.512195
NA ECP_3656 2-ketogluconate reductasechromosome CDS3831538 975 + 0.512821
NA ECP_1240 putative pyrophosphorylase ModDchromosome CDS1267281 855 - 0.519298
NA ECP_2900 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3070202 1179 - 0.592027
NA ECP_1581 pyridoxamine kinasechromosome CDS1634388 861 - 0.52381
NA ECP_2949 hypothetical protein YggWchromosome CDS3115075 1137 + 0.525066
NA ECP_0079 acetolactate synthase isozyme III large subunitchromosome CDS86948 1725 + 0.531594
NA ECP_0488 protoheme IX farnesyltransferasechromosome CDS514043 891 - 0.535354
NA ECP_2941 glutathione synthetasechromosome CDS3109696 951 + 0.521556
NA ECP_3737 flavoprotein affecting synthesis of DNA and pantothenate metabolismchromosome CDS3917201 1221 + 0.53317
NA ECP_0571 putative allantoin permeasechromosome CDS600338 1455 + 0.472852
NA ECP_2653 glutamate-cysteine ligasechromosome CDS2792167 1557 - 0.514451
NA ECP_4770 lipoate-protein ligase Achromosome CDS4919974 1017 - 0.574238
NA ECP_0143 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS154233 795 - 0.548428
NA ECP_1997 putative phosphoadenosine phosphosulfate reductasechromosome CDS2077948 1224 - 0.500817
NA ECP_3967 ketol-acid reductoisomerasechromosome CDS4141704 1476 + 0.530488
NA ECP_0164 glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS178826 1281 - 0.558158
NA ECP_1991 cobalamin biosynthesis protein CobUchromosome CDS2072584 546 - 0.503663
NA ECP_1990 cobalamin [5'-phosphate] synthasechromosome CDS2071844 744 - 0.533602
NA ECP_3893 2-oxo-3-deoxygalactonate 6-phosphate aldolase/galactonate dehydratasechromosome CDS4056348 1149 - 0.525675
 
Escherichia coli APEC O1, APEC O1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA APECO1_1854 hypothetical proteinchromosome CDS152321 381 - 0.532808
NA APECO1_2942 putative ATP-binding protein of ABC transport systemchromosome CDS3954007 771 + 0.488975
NA APECO1_3617 putative 5-formyltetrahydrofolate cyclo-ligase-family proteinchromosome CDS3250783 747 + 0.52075
NA APECO1_4163 putative oxalyl-CoA decarboxylasechromosome CDS2624061 1695 - 0.471386
NA APECO1_3443 hypothetical proteinchromosome CDS3409998 1173 + 0.522592
NA APECO1_1052 putative anthranilate synthasechromosome CDS2092250 1305 - 0.551724
NA APECO1_2413 putative transporterchromosome CDS4593810 558 + 0.507168
NA APECO1_2302 putative S-adenosylmethionine synthetasechromosome CDS4723026 1098 - 0.533698
NA APECO1_312 putative iron compound ABC transporter, permease proteinchromosome CDS1260398 981 - 0.546381
NA APECO1_3386 putative iron compound permease protein of ABC transporter familychromosome CDS3467782 984 - 0.543699
NA APECO1_3387 putative iron compound permease protein of ABC transporter familychromosome CDS3466736 1050 - 0.509524
NA APECO1_311 putative iron compound ABC transporter, ATP-binding proteinchromosome CDS1259643 897 - 0.537347
acpT APECO1_2979 holo-(acyl carrier protein) synthase 2chromosome CDS3912253 588 + 0.568027
bioA APECO1_1315 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS772665 1290 - 0.563566
bioB APECO1_1314 biotin synthasechromosome CDS774042 1041 + 0.54659
bioD APECO1_1311 dithiobiotin synthetasechromosome CDS776968 678 + 0.547198
bioF APECO1_1313 8-amino-7-oxononanoate synthasechromosome CDS775079 1155 + 0.579221
birA APECO1_2494 BirA bifunctional proteinchromosome CDS4494663 966 + 0.490683
btuC APECO1_784 vitamin B12-transporter ATPasechromosome CDS1809623 750 - 0.552
btuC APECO1_786 vitamin B12 transporter subunit: membrane component of ABC superfamilychromosome CDS1810985 981 - 0.553517
btuR APECO1_430 cob(I)alamin adenolsyltransferasechromosome CDS1386628 591 - 0.50423
chuU APECO1_2943 putative permease of iron compound ABC transport systemchromosome CDS3953054 957 + 0.528736
chuW APECO1_2946 putative oxygen independent coproporphyrinogen III oxidase ChuWchromosome CDS3950502 1338 + 0.521674
citG APECO1_1438 triphosphoribosyl-dephospho-CoA transferasechromosome CDS630680 879 - 0.5438
citX APECO1_1437 apo-citrate lyase phosphoribosyl-dephospho-CoA transferasechromosome CDS631533 552 - 0.585145
coaA APECO1_2493 pantothenate kinasechromosome CDS4495657 972 - 0.440329
coaC APECO1_1885 dephospho-CoA kinasechromosome CDS114903 621 - 0.523349
cobS APECO1_1073 putative cobalamin synthasechromosome CDS2136903 780 - 0.525641
cobT APECO1_1072 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2135812 1080 - 0.523148
cobU APECO1_1074 cobalamin biosynthesis protein CobUchromosome CDS2137643 546 - 0.505495
cyoE APECO1_1583 cytochrome o ubiquinol oxidase C subunitchromosome CDS462523 936 - 0.53312
cysD APECO1_3772 sulfate adenylyltransferase subunit 2chromosome CDS3052182 909 - 0.534653
cysG APECO1_3088 multifunctional protein; Uroporphyrin-III C-methyltransferase; Ferrochelatase; Precorrin-2 oxidasechromosome CDS3788609 1374 + 0.540029
cysH APECO1_3770 phosphoadenosine phosphosulfate reductasechromosome CDS3054921 735 - 0.510204
dfp APECO1_2822 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthasechromosome CDS4103983 1293 + 0.528229
dgoD APECO1_2765 bifunctional 2-oxo-3-deoxygalactonate 6-phosphate aldolase/galactonate dehydratasechromosome CDS4166216 1149 - 0.528285
dxs APECO1_1590 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS454023 1863 - 0.540526
entC APECO1_1456 isochorismate synthasechromosome CDS610392 1188 + 0.558081
fepC APECO1_1461 ferric enterobactin transport ATP-binding proteinchromosome CDS605089 1134 - 0.559965
fepC APECO1_3385 ferric enterobactin transport ATP-binding protein FepCchromosome CDS3468762 810 - 0.492593
fepD APECO1_1459 ferric enterobactin transport system permease protein FepDchromosome CDS606890 1017 - 0.599803
fhuC APECO1_1834 iron-hydroxamate transporter subunitchromosome CDS175698 798 + 0.562657
folA APECO1_1934 dihydrofolate reductasechromosome CDS52305 615 + 0.520325
folB APECO1_3356 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerasechromosome CDS3504937 369 - 0.506775
folC APECO1_4249 bifunctional folylpolyglutamate synthase/dihydrofolate synthasechromosome CDS2536777 1269 - 0.55792
folD APECO1_1486 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS569491 867 - 0.545559
folE APECO1_4398 GTP cyclohydrolase Ichromosome CDS2356970 669 - 0.508221
folK APECO1_1843 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinasechromosome CDS163275 480 - 0.495833
folP APECO1_3255 7,8-dihydropteroate synthasechromosome CDS3616793 849 - 0.514723
folX APECO1_4261 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolasechromosome CDS2526156 363 + 0.446281
fre APECO1_2613 NAD(P)H-flavin reductasechromosome CDS4344969 702 + 0.522792
gcl APECO1_1507 glyoxylate carboligasechromosome CDS546165 1872 + 0.525107
gclA APECO1_2095 putative glycoxylate carboligase GclAchromosome CDS4949006 1740 - 0.476437
gshA APECO1_3833 gamma-glutamate-cysteine ligasechromosome CDS2988709 1323 - 0.519274
gshB APECO1_3574 glutathione synthetasechromosome CDS3286625 951 + 0.526814
gudD APECO1_3744 glucarate dehydratasechromosome CDS3087008 1341 - 0.536913
hemA APECO1_327 glutamyl-tRNA reductasechromosome CDS1277439 1257 + 0.53222
hemB APECO1_1635 delta-aminolevulinic acid dehydratasechromosome CDS405758 1008 - 0.539683
hemC APECO1_2673 porphobilinogen deaminasechromosome CDS4282627 963 - 0.568017
hemD APECO1_2674 uroporphyrinogen-III synthetasechromosome CDS4281890 741 - 0.535762
hemE APECO1_2478 uroporphyrinogen decarboxylasechromosome CDS4518254 1065 + 0.560563
hemF APECO1_4112 coproporphyrinogen III oxidase, aerobicchromosome CDS2682196 900 + 0.547778
hemG APECO1_2607 protoporphyrin oxidase, flavoproteinchromosome CDS4352952 546 + 0.509158
hemH APECO1_1540 ferrochelatasechromosome CDS513680 963 + 0.533749
hemL APECO1_1831 glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS179399 1281 - 0.556596
hemN APECO1_2595 oxygen-independent coproporphyrinogen III oxidasechromosome CDS4370211 1380 + 0.530435
hemY APECO1_2676 putative protoheme IX synthesis proteinchromosome CDS4279476 1197 - 0.550543
ilvB APECO1_2781 acetolactate synthase large subunitchromosome CDS4149909 1689 - 0.561279
ilvC APECO1_2697 ketol-acid reductoisomerasechromosome CDS4251579 1476 + 0.533875
ilvE APECO1_2701 branched-chain amino acid aminotransferasechromosome CDS4246151 930 + 0.54086
ilvG APECO1_2703 acetolactate synthase II large subunitchromosome CDS4244225 1647 + 0.540376
ilvI APECO1_1907 acetolactate synthase isozyme III large subunitchromosome CDS87963 1815 + 0.527273
ispA APECO1_1589 geranyltranstransferasechromosome CDS455910 900 - 0.537778
ispB APECO1_3247 octaprenyl diphosphate synthasechromosome CDS3626295 972 + 0.52572
kbl APECO1_2838 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS4085866 1197 - 0.543024
ldhA APECO1_554 D-lactate dehydrogenasechromosome CDS1528341 990 - 0.50404
lipA APECO1_1427 lipoyl synthasechromosome CDS643301 966 - 0.536232
lipB APECO1_1425 lipoyltransferasechromosome CDS645086 576 - 0.473958
lplA APECO1_1995 lipoate-protein ligase Achromosome CDS5063060 1017 - 0.575221
menA APECO1_2540 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4428435 927 - 0.533981
menB APECO1_4299 naphthoate synthasechromosome CDS2484672 858 - 0.539627
menC APECO1_4300 O-succinylbenzoate-CoA synthasechromosome CDS2483710 963 - 0.597092
menD APECO1_4297 menaquinone biosynthesis protein MenDchromosome CDS2486299 1860 - 0.563441
menF APECO1_4296 menaquinone-specific isochorismate synthasechromosome CDS2488058 1296 - 0.532407
metK APECO1_3589 S-adenosylmethionine synthetasechromosome CDS3281440 1155 + 0.530736
moaB APECO1_1307 molybdopterin biosynthesis, protein Bchromosome CDS782599 513 + 0.526316
moaC APECO1_1306 molybdopterin biosynthesis protein Cchromosome CDS783114 486 + 0.563786
moaE APECO1_1305 molybdopterin synthase, large subunitchromosome CDS783839 453 + 0.560706
mobA APECO1_2604 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4359586 585 - 0.505983
mobB APECO1_2605 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4359077 528 - 0.492424
modD APECO1_309 putative pyrophosphorylase ModDchromosome CDS1257970 855 - 0.519298
moeB APECO1_1267 molybdopterin biosynthesis protein MoeBchromosome CDS827196 750 - 0.553333
mog APECO1_1969 molybdopterin biosynthesis Mog proteinchromosome CDS9173 588 + 0.542517
nadB APECO1_3957 L-aspartate oxidasechromosome CDS2864495 1623 + 0.531115
nadC APECO1_1880 nicotinate-nucleotide pyrophosphorylasechromosome CDS120057 936 - 0.523504
nadD APECO1_1416 nicotinate-nucleotide adenylyltransferasechromosome CDS653382 642 - 0.492212
nadE APECO1_809 NH(3)-dependent NAD(+) synthetasechromosome CDS1837147 828 + 0.495169
nadR APECO1_1991 transcriptional regulator NadRchromosome CDS5067253 1254 + 0.505582
pabA APECO1_3095 para-aminobenzoate synthase component IIchromosome CDS3781048 564 - 0.52305
pabB APECO1_869 para-aminobenzoate synthase component Ichromosome CDS1902719 1362 + 0.517621
pabC APECO1_177 4-amino-4-deoxychorismate lyasechromosome CDS1135651 810 + 0.507407
panB APECO1_1851 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS154804 795 - 0.548428
panC APECO1_1852 pantoate-beta-alanine ligasechromosome CDS153941 852 - 0.5223
pdxA APECO1_1930 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS55606 990 - 0.557576
pdxA APECO1_1386 putative pyridoxine phosphate biosynthetic proteinchromosome CDS689448 987 + 0.52077
pdxH APECO1_721 pyridoxamine 5'-phosphate oxidasechromosome CDS1738740 657 - 0.51446
pdxJ APECO1_3967 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS2855078 747 - 0.554217
pdxK APECO1_4127 pyridoxine kinasechromosome CDS2668702 852 - 0.518779
pdxY APECO1_719 pyridoxine kinasechromosome CDS1736415 864 - 0.519676
pgtC APECO1_3509 phosphoglycerate transport regulatory proteinchromosome CDS3330846 1272 + 0.500786
pncB APECO1_43 PncBchromosome CDS992453 1251 - 0.515588
pnuC APECO1_1337 conserved hypothetical protein PnuCchromosome CDS747944 720 + 0.483333
poxB APECO1_1223 pyruvate dehydrogenasechromosome CDS871891 1719 - 0.531704
putP APECO1_106 proline:sodium symporterchromosome CDS1065193 1509 + 0.535454
ribA APECO1_437 GTP cyclohydrolase IIchromosome CDS1397417 654 - 0.489297
ribB APECO1_3366 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3491461 654 - 0.530581
ribD APECO1_1596 bifunctional pyrimidine deaminase/reductasechromosome CDS449288 1104 + 0.547101
ribE APECO1_742 riboflavin synthase, alpha chainchromosome CDS1759586 642 - 0.478193
ribF APECO1_1958 putative regulatorchromosome CDS22915 942 + 0.529724
ribH APECO1_1595 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS450384 567 + 0.52381
rimK APECO1_1241 ribosomal protein S6 modification proteinchromosome CDS854764 903 + 0.55814
rspA APECO1_2506 starvation sensing protein RspAchromosome CDS4474708 1275 + 0.49098
serA APECO1_3616 D-3-phosphoglycerate dehydrogenasechromosome CDS3251919 1233 - 0.522303
serC APECO1_19 SerCchromosome CDS961132 1089 + 0.496786
tbpA APECO1_1914 thiamine-binding periplasmic proteinchromosome CDS78144 996 - 0.513052
thiC APECO1_2481 thiamine biosynthesis protein ThiCchromosome CDS4514742 1896 - 0.55116
thiD APECO1_4442 phosphomethylpyrimidine kinasechromosome CDS2297250 801 - 0.546816
thiE APECO1_24812 thiamine biosynthesis protein ThiCchromosome CDS4514107 636 - 0.583333
thiF APECO1_2482 thiazole biosynthesis protein ThiFchromosome CDS4513359 849 - 0.564193
thiH APECO1_2484 thiazole biosynthesis protein ThiHchromosome CDS4511273 1134 - 0.544974
thiL APECO1_1593 thiamine monophosphate kinasechromosome CDS451467 978 + 0.550102
thiM APECO1_4441 hydroxyethylthiazole kinasechromosome CDS2298047 789 - 0.550063
thiP APECO1_1915 thiamine transport system permease protein ThiPchromosome CDS76558 1611 - 0.579764
tkrA APECO1_2895 2-ketoaldonate reductase/glyoxylate reductase Bchromosome CDS4017348 987 + 0.516717
trpD APECO1_424 fused glutamine amidotransferase (component II) of anthranilate synthase and anthranilate phosphoribosyl transferasechromosome CDS1378648 1596 - 0.563283
trpE APECO1_425 anthranilate synthase component Ichromosome CDS1380243 1563 - 0.542546
ubiA APECO1_2429 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4574239 873 + 0.514318
ubiC APECO1_2430 chorismate lyasechromosome CDS4573729 498 + 0.522088
ubiD APECO1_2614 3-octaprenyl-4-hydroxybenzoate decarboxylasechromosome CDS4343430 1494 + 0.534137
ubiE APECO1_2622 ubiquinone/menaquinone biosynthesis methyltransferase protein UbiEchromosome CDS4337297 756 + 0.518519
ubiF APECO1_1401 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS671485 1176 + 0.563776
ubiG APECO1_4328 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2448512 771 + 0.536965
ubiH APECO1_3621 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3247080 1179 - 0.59542
ubiX APECO1_4253 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2532887 570 - 0.529825
visC APECO1_3622 VisC proteinchromosome CDS3245855 1203 - 0.546135
ybbW APECO1_1504 putative allantoin transporterchromosome CDS549973 1455 + 0.472165
ybdN APECO1_1447 hypothetical proteinchromosome CDS620809 1221 - 0.465192
ycjG APECO1_478 hypothetical protein YcjGchromosome CDS1446101 966 + 0.541408
yfaW APECO1_4314 hypothetical proteinchromosome CDS2468919 1218 - 0.519704
ygcM APECO1_3767 6-pyruvoyl tetrahydrobiopterin synthase (PTPS)chromosome CDS3059556 366 + 0.491803
ygcY APECO1_3743 glucarate dehydratase-related proteinchromosome CDS3088369 1341 - 0.538404
ygdL APECO1_3720 hypothetical proteinchromosome CDS3114048 807 - 0.552664
yggC APECO1_3600 hypothetical proteinchromosome CDS3267296 624 - 0.536859
yggW APECO1_3566 putative coproporphyrinogen III oxidasechromosome CDS3292004 1137 + 0.524186
yidK APECO1_2774 putative symporter YidKchromosome CDS4156137 1716 - 0.5338
yjcG APECO1_2388 putative symporter YjcGchromosome CDS4624858 1650 - 0.549697
ynfK APECO1_676 putative dethiobiotin synthetasechromosome CDS1688182 708 - 0.521186
ynjC APECO1_824 putative ABC transporter permease protein YnjCchromosome CDS1851899 1536 + 0.564453
yojL APECO1_4345 putative thiamine biosynthesis lipoproteinchromosome CDS2419484 1056 - 0.533144
 
Escherichia coli CFT073, CFT073
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA c3164 Putative tail component of prophagechromosome CDS3037747 396 - 0.542929
NA c2419 anthranilate synthase component Ichromosome CDS2219615 1305 - 0.55249
NA c2471 hypothetical proteinchromosome CDS2314524 735 + 0.341497
NA c0297 hypothetical proteinchromosome CDS278252 768 + 0.566406
NA c2515 Putative ABC transporterchromosome CDS2352463 768 - 0.566406
NA c5029 Putative transporterchromosome CDS4805288 558 + 0.508961
NA c5030 NadR homologchromosome CDS4805818 1029 + 0.516035
NA c3774 Ferric enterobactin transport ATP-binding protein fepCchromosome CDS3606907 810 - 0.491358
NA c1692 hypothetical proteinchromosome CDS1528116 1287 + 0.529138
NA c2909 hypothetical proteinchromosome CDS2772644 1695 - 0.473156
NA c0764 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS745943 987 + 0.521783
NA c4909 hypothetical proteinchromosome CDS4670670 327 - 0.522936
NA c3405 2-hydroxyacid dehydrogenasechromosome CDS3249590 957 - 0.447231
NA c1650 Putative iron compound ABC transporter, ATP-binding proteinchromosome CDS1485799 759 - 0.537549
NA c4527 hypothetical proteinchromosome CDS4308770 726 + 0.519284
NA c4547 S-adenosylmethionine synthetasechromosome CDS4324644 1152 + 0.532118
NA c3715 hypothetical proteinchromosome CDS3548133 1173 + 0.520887
apbA c0536 2-dehydropantoate 2-reductasechromosome CDS517532 912 - 0.515351
bioA c0853 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS830743 1401 - 0.550321
bioB c0855 Biotin synthasechromosome CDS832119 1041 + 0.548511
bioD c0858 dithiobiotin synthetasechromosome CDS835045 678 + 0.536873
bioD c1984 dithiobiotin synthetasechromosome CDS1827231 708 - 0.521186
bioF c0856 8-amino-7-oxononanoate synthasechromosome CDS833156 1155 + 0.576623
birA c4932 biotin--protein ligasechromosome CDS4705330 966 + 0.490683
btuB c4929 Vitamin B12 receptor precursorchromosome CDS4695998 1890 + 0.492063
btuC c2107 vtamin B12-transporter permeasechromosome CDS1950139 981 - 0.54842
btuD c2105 vitamin B12-transporter ATPasechromosome CDS1948777 750 - 0.554667
btuR c1735 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS1571367 591 - 0.502538
chuW c4314 coproporphyrinogen III oxidasechromosome CDS4089673 1338 + 0.521674
citG c0701 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthasechromosome CDS687223 879 - 0.54835
citX c0702 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyasechromosome CDS688076 552 - 0.586957
coaA c4933 pantothenate kinasechromosome CDS4706324 972 - 0.440329
coaE c0123 dephospho-CoA kinasechromosome CDS117738 621 - 0.52657
cobS c2478 cobalamin synthasechromosome CDS2319367 780 - 0.528205
cobT c2477 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2318276 1080 - 0.512037
cobU c2479 adenosylcobinamide kinasechromosome CDS2320107 546 - 0.503663
cysD c3319 sulfate adenylyltransferase subunit 2chromosome CDS3158631 909 - 0.534653
cysG c4144 Ferrochelatasechromosome CDS3929216 1374 + 0.54294
cysH c3321 phosphoadenosine phosphosulfate reductasechromosome CDS3161370 735 - 0.511565
dfp c4463 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS4243657 1293 + 0.525135
dxs c0531 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS512243 1863 - 0.538379
entC c0680 isochorismate synthasechromosome CDS666946 1188 + 0.554714
fepC c0675 Ferric enterobactin transport ATP-binding protein fepCchromosome CDS661643 816 - 0.545343
fhuC c0186 Ferrichrome transport ATP-binding protein fhuCchromosome CDS180135 903 + 0.563677
folA c0058 Dihydrofolate reductasechromosome CDS52319 615 + 0.521951
folC c2860 Dihydrofolate synthasechromosome CDS2713474 1269 - 0.558708
folD c0645 FolD bifunctional proteinchromosome CDS625934 867 - 0.547866
folE c2688 GTP cyclohydrolase Ichromosome CDS2534679 669 - 0.508221
folK c0175 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS167802 480 - 0.491667
folP c3933 Dihydropteroate synthasechromosome CDS3757694 915 - 0.513661
folX c2846 D-erythro-7,8-dihydroneopterin triphosphate epimerasechromosome CDS2703828 363 + 0.446281
gshA c3245 glutamate--cysteine ligasechromosome CDS3097479 1557 - 0.515735
gshB c3533 glutathione synthetasechromosome CDS3387833 951 + 0.521556
hemA c1668 glutamyl-tRNA reductasechromosome CDS1503392 1455 + 0.520275
hemB c0477 delta-aminolevulinic acid dehydratasechromosome CDS463978 1008 - 0.53869
hemC c4724 porphobilinogen deaminasechromosome CDS4490025 963 - 0.568017
hemD c4723 uroporphyrinogen-III synthetasechromosome CDS4489288 741 - 0.533063
hemE c4954 uroporphyrinogen decarboxylasechromosome CDS4728923 1065 + 0.558685
hemF c2970 coproporphyrinogen III oxidasechromosome CDS2830770 903 + 0.548173
hemG c4797 Protoporphyrinogen oxidasechromosome CDS4560271 546 + 0.509158
hemH c0595 ferrochelatasechromosome CDS572601 963 + 0.538941
hemL c0189 glutamate-1-semialdehyde aminotransferasechromosome CDS183941 1281 - 0.558938
hemN c4816 coproporphyrinogen III oxidasechromosome CDS4577530 1380 + 0.531159
hemX c4722 Putative uroporphyrin-III C-methyltransferasechromosome CDS4488049 1218 - 0.541872
hemY c4721 HemY proteinchromosome CDS4486850 1197 - 0.550543
ilvB c4596 acetolactate synthase large subunitchromosome CDS4357281 1689 - 0.562463
ilvC c4696 ketol-acid reductoisomerasechromosome CDS4458802 1626 + 0.519065
ilvE c4692 branched-chain amino acid aminotransferasechromosome CDS4453524 930 + 0.551613
ilvG c4690 acetolactate synthase II large subunitchromosome CDS4451598 1647 + 0.541591
ilvI c0095 acetolactate synthase III large subunitchromosome CDS89367 1815 + 0.526722
ispA c0532 Geranyltranstransferasechromosome CDS514130 900 - 0.536667
ispB c3945 Octaprenyl-diphosphate synthasechromosome CDS3767198 972 + 0.526749
kbl c4444 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS4225540 1197 - 0.543024
kdtB c4458 phosphopantetheine adenylyltransferasechromosome CDS4240823 480 + 0.527083
ldhA c1827 D-lactate dehydrogenasechromosome CDS1659594 990 - 0.5
lipA c0718 lipoyl synthasechromosome CDS699842 966 - 0.534162
lipB c0720 lipoyltransferasechromosome CDS701627 642 - 0.476636
lplA c5471 lipoate-protein ligase Achromosome CDS5212482 1017 - 0.584071
menA c4883 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS4639117 939 - 0.534611
menB c2805 naphthoate synthasechromosome CDS2662344 858 - 0.54662
menC c2804 O-succinylbenzoate synthasechromosome CDS2661382 963 - 0.5919
menD c2808 2-oxoglutarate decarboxylasechromosome CDS2663971 1860 - 0.563978
menF c2809 menaquinone-specific isochorismate synthasechromosome CDS2665730 1296 - 0.532407
menG c4881 ribonuclease activity regulator protein RraAchromosome CDS4638539 486 - 0.522634
metK c3528 S-adenosylmethionine synthetasechromosome CDS3382637 1167 + 0.529563
moaA c0862 molybdenum cofactor biosynthesis protein Achromosome CDS839584 1071 + 0.53408
moaB c0863 Molybdenum cofactor biosynthesis protein Bchromosome CDS840676 513 + 0.524366
moaC c0865 molybdenum cofactor biosynthesis protein Cchromosome CDS841191 486 + 0.563786
moaD c0866 Molybdopterin converting factor subunit 1chromosome CDS841648 267 + 0.558052
moaE c0867 Molybdopterin converting factor subunit 2chromosome CDS841916 453 + 0.560706
mobA c4801 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4566906 585 - 0.505983
mobB c4800 Molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4566397 528 - 0.492424
modD c1647 molybdenum transport proteinchromosome CDS1484126 855 - 0.519298
moeA c0912 Molybdopterin biosynthesis protein moeAchromosome CDS886024 1236 - 0.562298
moeB c0911 molybdopterin biosynthesis protein MoeBchromosome CDS885275 750 - 0.561333
mogA c0013 molybdenum cofactor biosynthesis proteinchromosome CDS9921 591 + 0.541455
nadA c0825 quinolinate synthetasechromosome CDS804206 1044 + 0.506705
nadB c3098 L-aspartate oxidasechromosome CDS2973287 1623 + 0.527418
nadC c0128 nicotinate-nucleotide pyrophosphorylasechromosome CDS122892 936 - 0.521368
nadD c0730 nicotinic acid mononucleotide adenyltransferasechromosome CDS709922 705 - 0.489362
nadE c2139 NAD(+) synthetasechromosome CDS1976303 828 + 0.497585
nadR c5475 nicotinamide-nucleotide adenylyltransferasechromosome CDS5216675 1254 + 0.50638
pabA c4135 para-aminobenzoate synthase component IIchromosome CDS3921654 564 - 0.52305
pabB c2217 para-aminobenzoate synthase component Ichromosome CDS2046477 1362 + 0.512482
pabC c1366 4-amino-4-deoxychorismate lyasechromosome CDS1296801 783 + 0.507024
panB c0165 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS159329 795 - 0.543396
panC c0164 pantoate--beta-alanine ligasechromosome CDS158465 774 - 0.515504
panD c0160 aspartate 1-decarboxylase precursorchromosome CDS156519 381 - 0.532808
panF c4023 sodium/panthothenate symporterchromosome CDS3839369 1458 + 0.546639
pdxA c0065 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS55619 990 - 0.557576
pdxB c2865 erythronate-4-phosphate dehydrogenasechromosome CDS2718515 1137 - 0.530343
pdxH c2030 pyridoxamine 5'-phosphate oxidasechromosome CDS1877880 657 - 0.51446
pdxJ c3088 pyridoxal phosphate biosynthetic proteinchromosome CDS2963865 747 - 0.552878
pdxK c2953 pyridoxine kinasechromosome CDS2817279 852 - 0.518779
pdxY c2028 pyridoxine kinasechromosome CDS1875555 864 - 0.521991
pncB c1073 nicotinate phosphoribosyltransferasechromosome CDS1039942 1251 - 0.516387
pnuC c0826 Protein pnuCchromosome CDS805287 720 + 0.481944
poxB c1004 pyruvate dehydrogenasechromosome CDS963460 1719 - 0.535195
ribA c1746 GTP cyclohydrolase II proteinchromosome CDS1582867 654 - 0.489297
ribB c3795 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3629606 654 - 0.530581
ribD c0524 5-amino-6-(5-phosphoribosylamino)uracil reductasechromosome CDS507508 1104 + 0.548913
ribE c2056 riboflavin synthase subunit alphachromosome CDS1898739 642 - 0.471963
ribF c0029 hypothetical proteinchromosome CDS23669 942 + 0.528662
ribH c0525 riboflavin synthase subunit betachromosome CDS508604 567 + 0.527337
rimK c0985 Ribosomal protein S6 modification proteinchromosome CDS946342 903 + 0.559247
serA c3494 D-3-phosphoglycerate dehydrogenasechromosome CDS3353131 1233 - 0.524736
serC c1045 phosphoserine aminotransferasechromosome CDS1008613 1089 + 0.495868
tbpA c0084 Thiamine-binding periplasmic protein precursorchromosome CDS78838 996 - 0.518072
thiC c4951 thiamine biosynthesis protein ThiCchromosome CDS4725411 1908 - 0.551363
thiD c2630 phosphomethylpyrimidine kinasechromosome CDS2474388 801 - 0.548065
thiE c4950 thiamine-phosphate pyrophosphorylasechromosome CDS4724776 639 - 0.577465
thiF c4949 thiamine biosynthesis protein ThiFchromosome CDS4724028 771 - 0.561608
thiG c4947 thiazole synthasechromosome CDS4723072 786 - 0.581425
thiH c4946 thiamine biosynthesis protein ThiHchromosome CDS4721942 1134 - 0.548501
thiL c0528 thiamine monophosphate kinasechromosome CDS509687 978 + 0.550102
thiM c2631 hydroxyethylthiazole kinasechromosome CDS2475185 789 - 0.551331
thiS c4948 sulfur carrier protein ThiSchromosome CDS4723844 201 - 0.522388
trpD c1729 anthranilate phosphoribosyltransferasechromosome CDS1563393 1596 - 0.56015
trpE c1730 anthranilate synthase component Ichromosome CDS1564988 1563 - 0.539987
ubiA c5010 4-hydroxybenzoate octaprenyltransferasechromosome CDS4785046 873 + 0.516609
ubiB c4791 NAD(P)H-flavin reductasechromosome CDS4552346 735 + 0.522449
ubiC c5009 Chorismate--pyruvate lyasechromosome CDS4784536 498 + 0.524096
ubiE c4782 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4544707 756 + 0.518519
ubiG c2774 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2626420 723 + 0.540802
ubiH c3489 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3348292 1179 - 0.590331
ubiX c2855 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2709584 570 - 0.529825
visC c3488 hypothetical proteinchromosome CDS3347067 1203 - 0.546966
yabJ c0082 Thiamine transport ATP-binding protein thiQchromosome CDS76570 720 - 0.565278
ybbW c0625 Putative allantoin permeasechromosome CDS606435 1455 + 0.472852
ycdW c1295 Putative 2-hydroxyacid dehydrogenase ycdWchromosome CDS1241384 939 + 0.514377
ygcM c3324 Putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS3165921 450 + 0.475556
ygdL c3383 Hypothetical protein ygdLchromosome CDS3219902 807 - 0.550186
ygfA c3493 Hypothetical protein ygfAchromosome CDS3351995 747 + 0.52075
yggC c3511 hypothetical proteinchromosome CDS3368511 714 - 0.52381
yggW c3541 coproporphyrinogen III oxidasechromosome CDS3393212 1137 + 0.525945
ygiG c3808 Dihydroneopterin aldolasechromosome CDS3644815 372 - 0.510753
yhhU c4268 4'-phosphopantetheinyl transferase acpTchromosome CDS4051624 588 + 0.566327
yiaE c4372 2-hydroxyacid dehydrogenasechromosome CDS4156335 987 + 0.51773
yieE c4635 Hypothetical protein yieEchromosome CDS4395606 762 + 0.519685
yigC c4790 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS4550840 1494 + 0.534137
yleB c0748 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS727952 1197 + 0.56391
yojL c2756 Thiamine biosynthesis lipoprotein apbE precursorchromosome CDS2597422 1056 - 0.538826
 
Escherichia coli K12, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
abgT b1336 predicted cryptic aminobenzoyl-glutamate transporterchromosome CDS1398271 1527 - 0.492469
acpT b3475 holo-(acyl carrier protein) synthase 2chromosome CDS3610992 588 + 0.564626
bioA b0774 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS807191 1290 - 0.562791
bioB b0775 biotin synthasechromosome CDS808567 1041 + 0.555235
bioD b0778 dethiobiotin synthetasechromosome CDS811493 678 + 0.536873
bioF b0776 8-amino-7-oxononanoate synthasechromosome CDS809604 1155 + 0.580087
birA b3973 biotin--protein ligasechromosome CDS4171105 966 + 0.493789
btuB b3966 vitamin B12/cobalamin outer membrane transporterchromosome CDS4161662 1845 + 0.502439
btuC b1711 vtamin B12-transporter permeasechromosome CDS1792196 981 - 0.554536
btuD b1709 vitamin B12-transporter ATPasechromosome CDS1790833 750 - 0.552
btuR b1270 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS1325791 591 - 0.502538
citG b0613 triphosphoribosyl-dephospho-CoA transferasechromosome CDS645854 879 - 0.547213
citX b0614 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyasechromosome CDS646707 552 - 0.583333
coaA b3974 pantothenate kinasechromosome CDS4172099 951 - 0.440589
coaD b3634 phosphopantetheine adenylyltransferasechromosome CDS3807848 480 + 0.527083
coaE b0103 dephospho-CoA kinasechromosome CDS112599 621 - 0.52657
cobS b1992 cobalamin synthasechromosome CDS2062503 744 - 0.534946
cobT b1991 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2061412 1080 - 0.512963
cobU b1993 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferasechromosome CDS2063243 546 - 0.505495
cysD b2752 sulfate adenylyltransferase subunit 2chromosome CDS2873443 909 - 0.530253
cysG b3368 fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase/uroporphyrinogen methyltransferasechromosome CDS3495850 1374 + 0.546579
cysH b2762 phosphoadenosine phosphosulfate reductasechromosome CDS2885600 735 - 0.507483
dfp b3639 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthasechromosome CDS3810754 1221 + 0.536446
dxs b0420 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS437539 1863 - 0.542673
entC b0593 isochorismate synthasechromosome CDS624108 1176 + 0.564626
fecE b4287 KpLE2 phage-like element; iron-dicitrate transporter subunitchromosome CDS4508713 768 - 0.540365
fepC b0588 iron-enterobactin transporter subunitchromosome CDS618607 816 - 0.539216
fhuC b0151 iron-hydroxamate transporter subunitchromosome CDS169778 798 + 0.568922
folA b0048 dihydrofolate reductasechromosome CDS49823 480 + 0.527083
folB b3058 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerasechromosome CDS3202243 369 - 0.509485
folC b2315 bifunctional folylpolyglutamate synthase/ dihydrofolate synthasechromosome CDS2429696 1269 - 0.560284
folD b0529 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS556098 867 - 0.543253
folE b2153 GTP cyclohydrolase Ichromosome CDS2241006 669 - 0.512706
folK b0142 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinasechromosome CDS157253 480 - 0.5
folP b3177 7,8-dihydropteroate synthasechromosome CDS3322085 849 - 0.515901
folX b2303 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolasechromosome CDS2419347 363 + 0.449036
fre b3844 NAD(P)H-flavin reductasechromosome CDS4024550 702 + 0.52849
gshA b2688 glutamate--cysteine ligasechromosome CDS2812905 1557 - 0.513166
gshB b2947 glutathione synthetasechromosome CDS3089900 951 + 0.534175
hemA b1210 glutamyl-tRNA reductasechromosome CDS1262937 1257 + 0.543357
hemB b0369 delta-aminolevulinic acid dehydratasechromosome CDS387977 975 - 0.539487
hemC b3805 porphobilinogen deaminasechromosome CDS3987848 942 - 0.561571
hemD b3804 uroporphyrinogen-III synthetasechromosome CDS3987111 741 - 0.529015
hemE b3997 uroporphyrinogen decarboxylasechromosome CDS4195739 1065 + 0.560563
hemF b2436 coproporphyrinogen III oxidasechromosome CDS2551247 900 + 0.546667
hemG b3850 protoporphyrin oxidase, flavoproteinchromosome CDS4032631 546 + 0.518315
hemH b0475 ferrochelatasechromosome CDS497279 963 + 0.538941
hemL b0154 glutamate-1-semialdehyde aminotransferasechromosome CDS173602 1281 - 0.555035
hemN b3867 coproporphyrinogen III oxidasechromosome CDS4050068 1374 + 0.531295
hemX b3803 predicted uroporphyrinogen III methylasechromosome CDS3985908 1182 - 0.533841
hemY b3802 predicted protoheme IX synthesis proteinchromosome CDS3984709 1197 - 0.549708
ilvB b3671 acetolactate synthase large subunitchromosome CDS3849119 1689 - 0.563055
ilvC b3774 ketol-acid reductoisomerasechromosome CDS3955993 1476 + 0.53794
ilvE b3770 branched-chain amino acid aminotransferasechromosome CDS3950507 930 + 0.549462
ilvG b4488 chromosome pseudo3948583 1645 + 0.546505
ilvG b4488 chromosome pseudo3948583 1645 + 0.546505
ilvI b0077 acetolactate synthase III large subunitchromosome CDS85630 1725 + 0.529275
ispA b0421 geranyltranstransferasechromosome CDS439426 900 - 0.542222
ispB b3187 octaprenyl diphosphate synthasechromosome CDS3331732 972 + 0.526749
kbl b3617 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS3789378 1197 - 0.542189
ldhA b1380 D-lactate dehydrogenasechromosome CDS1439878 990 - 0.50101
lipA b0628 lipoyl synthasechromosome CDS658474 966 - 0.534162
lipB b0630 lipoyltransferasechromosome CDS660860 642 - 0.476636
lplA b4386 lipoate-protein ligase Achromosome CDS4621124 1017 - 0.578171
menA b3930 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4117446 927 - 0.533981
menB b2262 naphthoate synthasechromosome CDS2373984 858 - 0.555944
menC b2261 O-succinylbenzoate synthasechromosome CDS2373022 963 - 0.589823
menD b2264 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthasechromosome CDS2375611 1671 - 0.581089
menF b2265 menaquinone-specific isochorismate synthasechromosome CDS2377370 1296 - 0.533951
metK b2942 S-adenosylmethionine synthetasechromosome CDS3084728 1155 + 0.532468
mhpA b0347 3-(3-hydroxyphenyl)propionate hydroxylasechromosome CDS367835 1665 + 0.56997
moaA b0781 molybdenum cofactor biosynthesis protein Achromosome CDS816267 990 + 0.541414
moaB b0782 molybdopterin biosynthesis protein Bchromosome CDS817278 513 + 0.520468
moaC b0783 molybdenum cofactor biosynthesis protein Cchromosome CDS817793 486 + 0.559671
moaD b0784 molybdopterin synthase, small subunitchromosome CDS818271 246 + 0.556911
moaE b0785 molybdopterin synthase, large subunitchromosome CDS818518 453 + 0.567329
mobA b3857 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4039438 585 - 0.500855
mobB b3856 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4038929 513 - 0.487329
moeA b0827 molybdopterin biosynthesis proteinchromosome CDS864352 1236 - 0.563916
moeB b0826 molybdopterin biosynthesis protein MoeBchromosome CDS863603 750 - 0.552
mog b0009 molybdenum cofactor biosynthesis proteinchromosome CDS9306 588 + 0.544218
nadA b0750 quinolinate synthetasechromosome CDS781308 1044 + 0.501916
nadB b2574 L-aspartate oxidasechromosome CDS2708442 1623 + 0.531731
nadC b0109 nicotinate-nucleotide pyrophosphorylasechromosome CDS117752 894 - 0.53132
nadD b0639 nicotinic acid mononucleotide adenyltransferasechromosome CDS669154 642 - 0.5
nadE b1740 NAD synthetasechromosome CDS1820482 828 + 0.495169
nadR b4390 nicotinamide-nucleotide adenylyltransferasechromosome CDS4625338 1233 + 0.509327
oxc b2373 hypothetical proteinchromosome CDS2488278 1695 - 0.466077
paaK b1398 phenylacetyl-CoA ligasechromosome CDS1460149 1314 + 0.518265
pabA b3360 para-aminobenzoate synthase component IIchromosome CDS3488288 564 - 0.533688
pabB b1812 para-aminobenzoate synthase component Ichromosome CDS1892829 1362 + 0.509545
pabC b1096 4-amino-4-deoxychorismate lyasechromosome CDS1152523 810 + 0.506173
panB b0134 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS148807 795 - 0.545912
panC b0133 pantoate--beta-alanine ligasechromosome CDS147944 852 - 0.526995
panD b0131 aspartate 1-decarboxylase precursorchromosome CDS146314 381 - 0.524934
panE b0425 2-dehydropantoate 2-reductasechromosome CDS442828 912 - 0.51864
panF b3258 sodium/panthothenate symporterchromosome CDS3405629 1452 + 0.543388
pdxA b0052 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS52427 990 - 0.563636
pdxB b2320 erythronate-4-phosphate dehydrogenasechromosome CDS2434737 1137 - 0.530343
pdxH b1638 pyridoxamine 5'-phosphate oxidasechromosome CDS1715375 657 - 0.519026
pdxJ b2564 pyridoxal phosphate biosynthetic proteinchromosome CDS2699020 732 - 0.564208
pdxK b2418 pyridoxine kinasechromosome CDS2534408 852 - 0.5223
pdxY b1636 pyridoxine kinasechromosome CDS1713050 864 - 0.530093
pncB b0931 nicotinate phosphoribosyltransferasechromosome CDS988377 1203 - 0.512053
pnuC b0751 predicted nicotinamide mononucleotide transporterchromosome CDS782389 720 + 0.481944
poxB b0871 pyruvate dehydrogenasechromosome CDS908554 1719 - 0.54043
ribA b1277 GTP cyclohydrolase II proteinchromosome CDS1336594 591 - 0.500846
ribB b3041 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3181835 654 - 0.518349
ribC b1662 riboflavin synthase subunit alphachromosome CDS1740625 642 - 0.475078
ribD b0414 fused diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductasechromosome CDS432679 1104 + 0.553442
ribE b0415 riboflavin synthase subunit betachromosome CDS433871 471 + 0.522293
ribF b0025 hypothetical proteinchromosome CDS21407 942 + 0.536093
rimK b0852 ribosomal protein S6 modification proteinchromosome CDS891190 903 + 0.562569
rraA b3929 ribonuclease activity regulator protein RraAchromosome CDS4116868 486 - 0.522634
serA b2913 D-3-phosphoglycerate dehydrogenasechromosome CDS3055200 1233 - 0.529603
serC b0907 phosphoserine aminotransferasechromosome CDS956876 1089 + 0.501377
tbpA b0068 thiamin transporter subunitchromosome CDS74497 984 - 0.53252
thiC b3994 thiamine biosynthesis protein ThiCchromosome CDS4192227 1896 - 0.557489
thiD b2103 phosphomethylpyrimidine kinasechromosome CDS2181738 801 - 0.554307
thiE b3993 thiamine-phosphate pyrophosphorylasechromosome CDS4191592 636 - 0.580189
thiF b3992 thiamine biosynthesis protein ThiFchromosome CDS4190844 756 - 0.575397
thiG b3991 thiazole synthasechromosome CDS4189888 771 - 0.584955
thiH b3990 thiamine biosynthesis protein ThiHchromosome CDS4188758 1134 - 0.550265
thiL b0417 thiamine monophosphate kinasechromosome CDS434858 978 + 0.543967
thiM b2104 hydroxyethylthiazole kinasechromosome CDS2182535 789 - 0.541191
thiQ b0066 thiamin transporter subunitchromosome CDS72229 699 - 0.570815
thiS b4407 sulfur carrier protein ThiSchromosome CDS4190660 201 - 0.557214
tiaE b3553 2-ketoaldonate reductase/glyoxylate reductase Bchromosome CDS3715333 975 + 0.52
trpD b1263 bifunctional indole-3-glycerol-phosphate synthase/anthranilate phosphoribosyltransferasechromosome CDS1317813 1596 - 0.56391
trpE b1264 anthranilate synthase component Ichromosome CDS1319408 1563 - 0.543826
ubiA b4040 4-hydroxybenzoate octaprenyltransferasechromosome CDS4251039 873 + 0.517755
ubiC b4039 chorismate pyruvate lyasechromosome CDS4250529 498 + 0.528112
ubiD b3843 3-octaprenyl-4-hydroxybenzoate decarboxylasechromosome CDS4023011 1494 + 0.538153
ubiE b3833 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4016878 756 + 0.521164
ubiF b0662 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS694324 1176 + 0.571429
ubiG b2232 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2337589 723 + 0.542185
ubiH b2907 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3050362 1179 - 0.59542
ubiX b2311 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2426079 570 - 0.531579
visC b2906 hypothetical proteinchromosome CDS3049137 1203 - 0.54946
yagJ b0276 CP4-6 prophage; predicted proteinchromosome CDS290724 732 + 0.489071
ybbW b0511 predicted allantoin transporterchromosome CDS536857 1455 + 0.470103
ycjG b1325 L-Ala-D/L-Glu epimerasechromosome CDS1386954 966 + 0.546584
ydhR b1667 hypothetical proteinchromosome CDS1744724 306 + 0.447712
yfbN b2273 hypothetical proteinchromosome CDS2385732 717 - 0.390516
ygcM b2765 6-pyruvoyl tetrahydrobiopterin synthase (PTPS)chromosome CDS2890236 366 + 0.494536
ygdL b2812 hypothetical proteinchromosome CDS2943058 807 - 0.546468
ygfA b2912 predicted ligasechromosome CDS3054263 549 + 0.519126
yggC b2928 hypothetical proteinchromosome CDS3071998 714 - 0.502801
yggW b2955 coproporphyrinogen III oxidasechromosome CDS3095289 1137 + 0.532102
yieE b3712 predicted phosphopantetheinyl transferasechromosome CDS3891892 762 + 0.520997
ynfK b1593 predicted dethiobiotin synthetasechromosome CDS1664548 696 - 0.521552
yojL b2214 predicted thiamine biosynthesis lipoproteinchromosome CDS2308501 1056 - 0.534091
 
Escherichia coli O157:H7 EDL933, EDL933
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Z3637 hypothetical proteinchromosome CDS3288348 1695 - 0.469027
NA Z4047 putative decarboxylasechromosome CDS3653113 594 - 0.569024
NA Z4273 hypothetical proteinchromosome CDS3881895 714 - 0.530812
NA Z0665 hypothetical proteinchromosome CDS629921 1392 + 0.476293
NA Z0886 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS844773 603 - 0.529022
NA Z2392 unknown protein encoded within prophage CP-933Rchromosome CDS2153104 264 - 0.420455
NA Z1964 putative iron compound ABC transporter, ATP-binding proteinchromosome CDS1782948 759 - 0.540184
NA Z4867 hypothetical proteinchromosome CDS4414795 588 + 0.566327
NA Z2428 partial putative pump protein; disrupted by IS629chromosome CDS2175921 798 + 0.502506
NA Z2694 hypothetical proteinchromosome CDS2421607 306 + 0.45098
NA Z3390 salicylate hydroxylasechromosome CDS3030743 1194 - 0.58459
NA Z2431 partial putative pump protein; disrupted by IS629chromosome CDS2178068 693 + 0.489177
NA Z0055 dihydrofolate reductase type I; trimethoprim resistancechromosome CDS54238 480 + 0.533333
NA Z4385 putative ATP-binding protein of ABC transporter familychromosome CDS3983525 810 - 0.488889
NA Z4046 hypothetical proteinchromosome CDS3651686 1428 - 0.576331
apbA Z0528 2-dehydropantoate 2-reductasechromosome CDS509659 912 - 0.509868
bioA Z0993 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS931986 1290 - 0.55814
bioB Z0994 biotin synthesis, sulfur insertion?chromosome CDS933362 1041 + 0.540826
bioD Z2585 dithiobiotin synthetasechromosome CDS2341611 708 - 0.519774
bioD Z0997 dithiobiotin synthetasechromosome CDS936288 678 + 0.547198
bioF Z0995 8-amino-7-oxononanoate synthasechromosome CDS934399 1155 + 0.578355
birA Z5544 biotin--protein ligasechromosome CDS5050862 966 + 0.493789
btuB Z5527 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS5041670 1845 + 0.498645
btuC Z2740 vtamin B12-transporter permeasechromosome CDS2469087 981 - 0.551478
btuD Z2738 vitamin B12-transporter ATPasechromosome CDS2467724 750 - 0.549333
btuR Z2540 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS2258112 591 + 0.510998
chuW Z4914 coproporphyrinogen III oxidasechromosome CDS4460290 1338 + 0.513453
citG Z0757 hypothetical proteinchromosome CDS727767 879 - 0.549488
citX Z0758 2'-(5' '-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyasechromosome CDS728620 552 - 0.57971
coaA Z5545 pantothenate kinasechromosome CDS5051856 927 - 0.444444
coaE Z0113 dephospho-CoA kinasechromosome CDS117089 621 - 0.52657
cobS Z3152 cobalamin synthasechromosome CDS2810313 744 - 0.532258
cobT Z3151 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2809222 1080 - 0.52037
cobU Z3153 adenosylcobinamide kinasechromosome CDS2811053 546 - 0.505495
cysD Z4060 sulfate adenylyltransferase subunit 2chromosome CDS3663242 909 - 0.536854
cysG Z4729 uroporphyrinogen III methylase; sirohaeme biosynthesischromosome CDS4284956 1374 + 0.548763
cysH Z4072 phosphoadenosine phosphosulfate reductasechromosome CDS3674995 735 - 0.510204
dfp Z5063 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS4625501 1293 + 0.529002
dxs Z0523 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS504370 1863 - 0.536769
entC Z0735 isochorismate synthasechromosome CDS706137 1176 + 0.562925
fepC Z0729 ATP-binding component of ferric enterobactin transportchromosome CDS700822 816 - 0.541667
fhuC Z0162 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS174101 798 + 0.567669
folC Z3577 dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetasechromosome CDS3227983 1269 - 0.559496
folD Z0684 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS649021 867 - 0.542099
folE Z3409 GTP cyclohydrolase Ichromosome CDS3049245 669 - 0.508221
folK Z0153 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinasechromosome CDS161573 483 - 0.501035
folP Z4539 7,8-dihydropteroate synthasechromosome CDS4133777 894 - 0.510067
folX Z3565 D-erythro-7,8-dihydroneopterin tri P epimerasechromosome CDS3217451 363 + 0.440771
gshA Z3989 glutamate--cysteine ligasechromosome CDS3606331 1557 - 0.515735
gshB Z4292 glutathione synthetasechromosome CDS3900685 948 + 0.531646
hemA Z1981 glutamyl-tRNA reductasechromosome CDS1801002 1257 + 0.538584
hemB Z0468 delta-aminolevulinic acid dehydratasechromosome CDS449757 1008 - 0.536706
hemC Z5319 porphobilinogen deaminasechromosome CDS4852245 963 - 0.558671
hemD Z5318 uroporphyrinogen-III synthetasechromosome CDS4851508 741 - 0.530364
hemE Z5572 uroporphyrinogen decarboxylasechromosome CDS5075287 1065 + 0.560563
hemF Z3701 coproporphyrinogen III oxidasechromosome CDS3346162 900 + 0.544444
hemG Z5372 protoporphyrinogen oxidasechromosome CDS4899492 546 + 0.521978
hemH Z0592 ferrochelatasechromosome CDS563849 963 + 0.538941
hemL Z0165 glutamate-1-semialdehyde aminotransferasechromosome CDS177802 1281 - 0.555816
hemN Z5403 coproporphyrinogen III oxidasechromosome CDS4916753 1380 + 0.531884
hemX Z5317 uroporphyrinogen III methylasechromosome CDS4850287 1200 - 0.535833
hemY Z5316 a late step of protoheme IX synthesischromosome CDS4849088 1197 - 0.548872
ilvB Z5165 acetolactate synthase large subunitchromosome CDS4710554 1689 - 0.562463
ilvC Z5285 ketol-acid reductoisomerasechromosome CDS4820401 1476 + 0.53794
ilvE Z5281 branched-chain amino acid aminotransferasechromosome CDS4814911 930 + 0.548387
ilvG Z5279 acetolactate synthase II large subunitchromosome CDS4812985 1647 + 0.542198
ilvI Z0087 acetolactate synthase III large subunitchromosome CDS90152 1809 + 0.524046
ispA Z0524 geranyltranstransferase (farnesyldiphosphate synthase)chromosome CDS506257 900 - 0.543333
ispB Z4550 octaprenyl diphosphate synthasechromosome CDS4143278 972 + 0.527778
kbl Z5044 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS4607170 1197 - 0.543024
kdtB Z5058 phosphopantetheine adenylyltransferasechromosome CDS4622667 480 + 0.529167
ldhA Z2329 D-lactate dehydrogenasechromosome CDS2108135 990 + 0.50303
lipA Z0773 lipoyl synthasechromosome CDS740388 966 - 0.535197
lipB Z0775 lipoyltransferasechromosome CDS742775 576 - 0.472222
menA Z5477 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS4989679 927 - 0.539374
menB Z3522 naphthoate synthasechromosome CDS3176431 858 - 0.545455
menC Z3521 O-succinylbenzoate synthasechromosome CDS3175469 963 - 0.586708
menD Z3524 2-oxoglutarate decarboxylasechromosome CDS3178058 1671 - 0.581688
menF Z3525 menaquinone-specific isochorismate synthasechromosome CDS3179817 1071 - 0.537815
menG Z5476 ribonuclease activity regulator protein RraAchromosome CDS4989101 486 - 0.518519
metK Z4287 S-adenosylmethionine synthetasechromosome CDS3895500 1155 + 0.532468
mhpA Z0445 3-(3-hydroxyphenyl)propionate hydroxylasechromosome CDS427213 1665 + 0.569369
moaA Z1000 molybdenum cofactor biosynthesis protein Achromosome CDS941062 990 + 0.541414
moaB Z1001 molybdopterin biosynthesis, protein Bchromosome CDS942073 513 + 0.518519
moaC Z1002 molybdenum cofactor biosynthesis protein Cchromosome CDS942588 486 + 0.561728
moaD Z1003 molybdopterin biosynthesischromosome CDS943066 246 + 0.560976
moaE Z1004 molybdopterin converting factor, subunit 2chromosome CDS943313 453 + 0.571744
mobA Z5389 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4906131 585 - 0.507692
mobB Z5388 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4905622 513 - 0.487329
modD Z1962 molybdenum transport proteinchromosome CDS1781275 855 - 0.522807
moeA Z1050 molybdopterin biosynthesischromosome CDS991121 1236 - 0.566343
moeB Z1049 molybdopterin biosynthesis protein MoeBchromosome CDS990372 750 - 0.558667
mogA Z0009 molybdenum cofactor biosynthesis proteinchromosome CDS9323 588 + 0.539116
nadA Z0919 quinolinate synthetasechromosome CDS867603 1044 + 0.508621
nadB Z3856 L-aspartate oxidasechromosome CDS3500632 1623 + 0.529267
nadC Z0119 nicotinate-nucleotide pyrophosphorylasechromosome CDS122242 894 - 0.535794
nadD Z0786 nicotinic acid mononucleotide adenyltransferasechromosome CDS751070 642 - 0.495327
nadE Z2770 NAD(+) synthetasechromosome CDS2497173 828 + 0.491546
nadR Z5991 nicotinamide-nucleotide adenylyltransferasechromosome CDS5514087 1254 + 0.508772
pabA Z4721 para-aminobenzoate synthase component IIchromosome CDS4277394 564 - 0.535461
pabB Z2855 para-aminobenzoate synthase component Ichromosome CDS2571838 1362 + 0.505874
pabC Z1735 4-amino-4-deoxychorismate lyasechromosome CDS1597481 810 + 0.504938
panB Z0145 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS153399 795 - 0.540881
panC Z0144 pantoate--beta-alanine ligasechromosome CDS152536 852 - 0.542253
panD Z0142 aspartate 1-decarboxylase precursorchromosome CDS150687 381 - 0.524934
panF Z4618 sodium/panthothenate symporterchromosome CDS4209779 1458 + 0.53978
pdxA Z0061 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS57403 990 - 0.561616
pdxB Z3582 erythronate-4-phosphate dehydrogenasechromosome CDS3233024 1137 - 0.528584
pdxH Z2652 pyridoxamine 5'-phosphate oxidasechromosome CDS2392271 657 - 0.512938
pdxJ Z3845 pyridoxal phosphate biosynthetic proteinchromosome CDS3491221 732 - 0.565574
pdxK Z3684 pyridoxine kinasechromosome CDS3330611 852 - 0.518779
pdxY Z2648 pyridoxine kinasechromosome CDS2389945 864 - 0.521991
pncB Z1279 nicotinate phosphoribosyltransferasechromosome CDS1207848 1203 - 0.511222
pnuC Z0920 required for NMN transportchromosome CDS868684 720 + 0.477778
poxB Z1105 pyruvate dehydrogenasechromosome CDS1042103 1719 - 0.543339
ribA Z2531 GTP cyclohydrolase II proteinchromosome CDS2247309 591 + 0.500846
ribB Z4399 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3997222 654 - 0.525994
ribD Z0515 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesischromosome CDS497712 1104 + 0.560688
ribE Z2688 riboflavin synthase subunit alphachromosome CDS2417506 642 - 0.478193
ribF Z0029 hypothetical proteinchromosome CDS25819 942 + 0.535032
ribH Z0516 riboflavin synthase subunit betachromosome CDS498904 471 + 0.518047
rimK Z1079 ribosomal protein S6 modification proteinchromosome CDS1018913 903 + 0.559247
serA Z4251 D-3-phosphoglycerate dehydrogenasechromosome CDS3862008 1233 - 0.527981
serC Z1253 phosphoserine aminotransferasechromosome CDS1176519 1089 + 0.503214
tbpA Z0077 thiamin-binding periplasmic proteinchromosome CDS79317 984 - 0.529472
thiC Z5569 thiamine biosynthesis protein ThiCchromosome CDS5071775 1896 - 0.55327
thiD Z3267 phosphomethylpyrimidine kinasechromosome CDS2927468 801 - 0.550562
thiE Z5568 thiamine-phosphate pyrophosphorylasechromosome CDS5071140 636 - 0.575472
thiF Z5567 thiamine biosynthesis protein ThiFchromosome CDS5070392 738 - 0.574526
thiG Z5565 thiazole synthasechromosome CDS5069436 846 - 0.579196
thiH Z5564 thiamine biosynthesis protein ThiHchromosome CDS5068306 1134 - 0.55291
thiL Z0519 thiamine monophosphate kinasechromosome CDS499891 978 + 0.547035
thiM Z3268 hydroxyethylthiazole kinasechromosome CDS2928265 789 - 0.544994
thiS Z5566 sulfur carrier protein ThiSchromosome CDS5070208 201 - 0.537313
trpD Z2548 anthranilate phosphoribosyltransferasechromosome CDS2264773 1596 + 0.555764
trpE Z2546m anthranilate synthase component Ichromosome CDS2263210 1563 + 0.547665
ubiA Z5639 4-hydroxybenzoate octaprenyltransferasechromosome CDS5136184 873 + 0.514318
ubiB Z5365 NAD(P)H-flavin reductasechromosome CDS4891600 702 + 0.52849
ubiC Z5638 chorismate lyasechromosome CDS5135563 609 + 0.504105
ubiE Z5355 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4883928 756 + 0.521164
ubiG Z3486 3-demethylubiquinone-9 3-methyltransferasechromosome CDS3136606 723 + 0.542185
ubiH Z4244 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3856777 1179 - 0.594572
ubiX Z3573 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS3224183 570 - 0.52807
visC Z4243 hypothetical proteinchromosome CDS3855551 1203 - 0.54946
yabJ Z0075 putative ATP-binding component of a transport systemchromosome CDS77049 699 - 0.569385
ycdW Z1666 putative dehydrogenasechromosome CDS1542072 978 + 0.510225
ygcM Z4075 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS3679630 366 + 0.486339
ygdL Z4129 putative enzymechromosome CDS3734734 807 - 0.54399
ygfA Z4249 putative ligasechromosome CDS3860678 549 + 0.519126
yggW Z4300 coproporphyrinogen III oxidasechromosome CDS3906085 1137 + 0.531223
ygiG Z4411 putative kinasechromosome CDS4011065 372 - 0.508065
yiaE Z4978 2-hydroxyacid dehydrogenasechromosome CDS4532101 987 + 0.52077
yieE Z5207 hypothetical proteinchromosome CDS4751559 762 + 0.519685
yigC Z5364 putative oxidoreductasechromosome CDS4890061 1494 + 0.516734
yleB Z0811 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS775043 1176 + 0.561224
yojL Z3472 hypothetical proteinchromosome CDS3114735 1056 - 0.53125
 
Escherichia coli O157:H7 str. Sakai, Sakai
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ECs0138 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS153398 795 - 0.540881
NA ECs4612 acetolactate synthase large subunitchromosome CDS4641571 1689 - 0.562463
NA ECs3307 coproporphyrinogen III oxidasechromosome CDS3276328 900 + 0.545556
NA ECs0859 molybdenum cofactor biosynthesis protein Achromosome CDS939409 990 + 0.541414
NA ECs2418 vtamin B12-transporter permeasechromosome CDS2393886 981 - 0.551478
NA ECs4056 7,8-dihydropteroate synthasechromosome CDS4066561 849 - 0.515901
NA ECs3778 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3789469 1179 - 0.59542
NA ECs3152 2-oxoglutarate decarboxylasechromosome CDS3108102 1671 - 0.58468
NA ECs3430 pyridoxal phosphate biosynthetic proteinchromosome CDS3421382 732 - 0.56694
NA ECs4495 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS4538188 1197 - 0.543024
NA ECs2002 D-lactate dehydrogenasechromosome CDS1979356 990 - 0.50303
NA ECs4438 2-hydroxyacid dehydrogenasechromosome CDS4464872 987 + 0.52077
NA ECs0051 dihydrofolate reductase type Ichromosome CDS54237 480 + 0.533333
NA ECs3290 pyridoxine kinasechromosome CDS3260777 852 - 0.519953
NA ECs4509 phosphopantetheine adenylyltransferasechromosome CDS4553684 480 + 0.529167
NA ECs4789 coproporphyrinogen III oxidasechromosome CDS4847995 1374 + 0.532023
NA ECs4901 pantothenate kinasechromosome CDS4983093 951 - 0.44164
NA ECs4704 branched-chain amino acid aminotransferasechromosome CDS4745930 930 + 0.548387
NA ECs4708 ketol-acid reductoisomerasechromosome CDS4751416 1476 + 0.538618
NA ECs3027 salicylate hydroxylasechromosome CDS2959477 1194 - 0.58459
NA ECs4763 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4815164 756 + 0.521164
NA ECs4342 putative phosphopantetheinyltransferasechromosome CDS4347574 588 + 0.566327
NA ECs2345 pyridoxine kinasechromosome CDS2314753 864 - 0.521991
NA ECs4219 uroporphyrinogen III methylasechromosome CDS4217734 1374 + 0.548763
NA ECs0479 2-dehydropantoate 2-reductasechromosome CDS509657 912 - 0.509868
NA ECs0990 phosphoserine aminotransferasechromosome CDS1087296 1089 + 0.503214
NA ECs0028 hypothetical proteinchromosome CDS25818 942 + 0.535032
NA ECs3831 coproporphyrinogen III oxidasechromosome CDS3838773 1137 + 0.532102
NA ECs4734 uroporphyrinogen-III synthetasechromosome CDS4782746 741 - 0.530364
NA ECs0700 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS775262 1176 + 0.562925
NA ECs0146 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinasechromosome CDS161572 483 - 0.501035
NA ECs0862 molybdopterin biosynthesis protein D chainchromosome CDS941413 246 + 0.560976
NA ECs4780 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4837367 585 - 0.509402
NA ECs0528 ferrochelatasechromosome CDS563846 963 + 0.538941
NA ECs3593 putative phenylacrylic acid decarboxylasechromosome CDS3585815 594 - 0.570707
NA ECs5575 sulfur carrier protein ThiSchromosome CDS5001462 201 - 0.542289
NA ECs3199 dihydrofolate:folylpolyglutamate synthetasechromosome CDS3158027 1269 - 0.559496
NA ECs3818 S-adenosylmethionine synthetasechromosome CDS3828192 1155 + 0.532468
NA ECs2786 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2732858 1080 - 0.523148
NA ECs0756 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS843119 603 - 0.53068
NA ECs4856 ribonuclease activity regulator protein RraAchromosome CDS4920337 486 - 0.518519
NA ECs0572 putative transport proteinchromosome CDS630227 1392 + 0.476293
NA ECs2374 hypothetical proteinchromosome CDS2346411 306 + 0.45098
NA ECs4733 uroporphyrinogen III methylasechromosome CDS4781525 1200 - 0.536667
NA ECs0475 geranyltranstransferasechromosome CDS506255 900 - 0.543333
NA ECs1842 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS1828474 591 - 0.510998
NA ECs0860 molybdenum cofactor biosynthesis protein Bchromosome CDS940420 513 + 0.520468
NA ECs3115 3-demethylubiquinone-9 3-methyltransferasechromosome CDS3065337 723 + 0.542185
NA ECs4771 putative oxidoreductasechromosome CDS4821297 1494 + 0.516734
NA ECs4649 hypothetical proteinchromosome CDS4682578 762 + 0.519685
NA ECs2371 riboflavin synthase subunit alphachromosome CDS2342312 642 - 0.478193
NA ECs2906 phosphomethylpyrimidine kinasechromosome CDS2857249 801 - 0.550562
NA ECs3440 L-aspartate oxidasechromosome CDS3430793 1623 + 0.529883
NA ECs3550 glutamate--cysteine ligasechromosome CDS3539041 1557 - 0.51702
NA ECs1950 hypothetical proteinchromosome CDS1933798 264 + 0.420455
NA ECs0135 aspartate 1-decarboxylase precursorchromosome CDS150686 381 - 0.524934
NA ECs0474 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS504368 1863 - 0.536769
NA ECs3253 hypothetical proteinchromosome CDS3218389 1695 - 0.469027
NA ECs0932 ribosomal protein S6 modification proteinchromosome CDS1017254 903 + 0.561462
NA ECs0137 pantoate--beta-alanine ligasechromosome CDS152535 852 - 0.542253
NA ECs4211 para-aminobenzoate synthase component IIchromosome CDS4210172 564 - 0.535461
NA ECs0627 ATP-binding component of ferric enterobactin transportchromosome CDS701040 816 - 0.541667
NA ECs1410 putative dehydrogenasechromosome CDS1456987 978 + 0.510225
NA ECs3784 D-3-phosphoglycerate dehydrogenasechromosome CDS3794700 1233 - 0.527981
NA ECs3941 putative kinasechromosome CDS3943750 372 - 0.508065
NA ECs4857 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS4920915 927 - 0.539374
NA ECs2907 hydroxyethylthiazole kinasechromosome CDS2858046 789 - 0.544994
NA ECs3153 menaquinone-specific isochorismate synthasechromosome CDS3109861 1296 - 0.536265
NA ECs3804 hypothetical proteinchromosome CDS3814587 714 - 0.532213
NA ECs1014 nicotinate phosphoribosyltransferasechromosome CDS1118625 1203 - 0.511222
NA ECs2787 cobalamin synthasechromosome CDS2733949 744 - 0.532258
NA ECs0666 lipoyl synthasechromosome CDS740607 966 - 0.537267
NA ECs4383 coproporphyrinogen III oxidasechromosome CDS4393063 1338 + 0.513453
NA ECs3782 putative ligasechromosome CDS3793316 603 + 0.515755
NA ECs3823 glutathione synthetasechromosome CDS3833377 948 + 0.531646
NA ECs3150 naphthoate synthasechromosome CDS3106475 858 - 0.547786
NA ECs0591 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS649327 867 - 0.545559
NA ECs0632 isochorismate synthasechromosome CDS706355 1176 + 0.562925
NA ECs3103 hypothetical proteinchromosome CDS3043466 1056 - 0.532197
NA ECs0113 nicotinate-nucleotide pyrophosphorylasechromosome CDS122241 894 - 0.535794
NA ECs0852 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS930334 1290 - 0.55969
NA ECs0467 pyrimidine deaminasechromosome CDS497710 1104 + 0.560688
NA ECs2347 pyridoxamine 5'-phosphate oxidasechromosome CDS2317078 657 - 0.512938
NA ECs2788 adenosylcobinamide kinasechromosome CDS2734689 546 - 0.505495
NA ECs4778 protoporphyrin oxidasechromosome CDS4830728 546 + 0.521978
NA ECs1694 molybdenum transport proteinchromosome CDS1689869 855 - 0.522807
NA ECs0158 glutamate-1-semialdehyde aminotransferasechromosome CDS177801 1281 - 0.555816
NA ECs1697 putative ferric enterobactin transport ATP-binding proteinchromosome CDS1691542 759 - 0.540184
NA ECs1917 hypothetical proteinchromosome CDS1908406 615 - 0.492683
NA ECs3617 phosphoadenosine phosphosulfate reductasechromosome CDS3607697 735 - 0.510204
NA ECs4772 NAD(P)H-flavin reductasechromosome CDS4822836 702 + 0.52849
NA ECs0853 biotin synthetasechromosome CDS931710 1041 + 0.541787
NA ECs4920 uroporphyrinogen decarboxylasechromosome CDS5006541 1065 + 0.561502
NA ECs0423 delta-aminolevulinic acid dehydratasechromosome CDS449755 975 - 0.539487
NA ECs1835 anthranilate phosphoribosyltransferasechromosome CDS1820809 1596 - 0.556391
NA ECs3620 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS3612332 366 + 0.486339
NA ECs4514 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS4556518 1293 + 0.529002
NA ECs3204 erythronate-4-phosphate dehydrogenasechromosome CDS3163068 1137 - 0.529464
NA ECs0470 thiamine monophosphate kinasechromosome CDS499889 978 + 0.547035
NA ECs3195 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS3154228 570 - 0.52807
NA ECs3592 putative 4-hydroxybenzoate decarboxylasechromosome CDS3584388 1428 - 0.576331
NA ECs3916 putative ABC-type iron-siderophore transport system ATP-binding proteinchromosome CDS3916210 810 - 0.490123
NA ECs4066 octaprenyl diphosphate synthasechromosome CDS4076062 972 + 0.527778
NA ECs0957 pyruvate dehydrogenasechromosome CDS1040443 1719 - 0.543921
NA ECs0863 molybdopterin biosynthesis protein E chainchromosome CDS941660 453 + 0.571744
NA ECs5348 nicotinamide-nucleotide adenylyltransferasechromosome CDS5484092 1254 + 0.508772
NA ECs3606 sulfate adenylyltransferase subunit 2chromosome CDS3595944 909 - 0.536854
NA ECs5022 chorismate lyasechromosome CDS5105688 498 + 0.524096
NA ECs4913 thiamine biosynthesis protein ThiHchromosome CDS4999560 1134 - 0.55291
NA ECs4779 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4836858 513 - 0.487329
NA ECs0854 8-amino-7-oxononanoate synthasechromosome CDS932747 1155 + 0.579221
NA ECs4702 acetolactate synthase II large subunitchromosome CDS4744004 1647 + 0.542198
NA ECs0652 hypothetical proteinchromosome CDS727985 879 - 0.549488
NA ECs3672 hypothetical proteinchromosome CDS3667436 807 - 0.54399
NA ECs3187 D-erythro-7,8-dihydroneopterin tri P epimerasechromosome CDS3147496 363 + 0.443526
NA ECs0070 putative ATP-binding component of a transport systemchromosome CDS77048 699 - 0.569385
NA ECs0402 3-(3-hydroxyphenyl)propionate hydroxylasechromosome CDS427211 1665 + 0.569369
NA ECs1920 putative pump proteinchromosome CDS1910448 798 - 0.502506
NA ECs4732 HemYchromosome CDS4780326 1197 - 0.548872
NA ECs1715 glutamyl-tRNA reductasechromosome CDS1709596 1257 + 0.539379
NA ECs0904 molybdopterin biosynthesis protein MoeBchromosome CDS988714 750 - 0.558667
NA ECs3777 hypothetical proteinchromosome CDS3788243 1203 - 0.550291
NA ECs1474 4-amino-4-deoxychorismate lyasechromosome CDS1512395 810 + 0.504938
NA ECs2521 para-aminobenzoate synthase component Ichromosome CDS2496634 1362 + 0.507342
NA ECs3149 O-succinylbenzoate synthasechromosome CDS3105513 963 - 0.587747
NA ECs4735 porphobilinogen deaminasechromosome CDS4783483 963 - 0.559709
NA ECs0155 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS174100 798 + 0.567669
NA ECs0779 PnuCchromosome CDS867030 720 + 0.477778
NA ECs1836 anthranilate synthase component Ichromosome CDS1822404 1563 - 0.548305
NA ECs2416 vitamin B12-transporter ATPasechromosome CDS2392523 750 - 0.549333
NA ECs0905 MoeAchromosome CDS989463 1236 - 0.567152
NA ECs4897 BtuBchromosome CDS4972904 1845 + 0.498645
NA ECs0057 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS57402 990 - 0.561616
NA ECs0072 thiamin-binding periplasmic proteinchromosome CDS79316 984 - 0.529472
NA ECs0778 quinolinate synthetasechromosome CDS865949 1044 + 0.508621
NA ECs0081 acetolactate synthase III large subunitchromosome CDS90235 1725 + 0.527536
NA ECs5023 4-hydroxybenzoate octaprenyltransferasechromosome CDS5106198 873 + 0.516609
bioD ECs0856 dithiobiotin synthetasechromosome CDS934636 678 + 0.547198
bioD ECs2299 dithiobiotin synthetasechromosome CDS2266326 696 - 0.520115
birA ECs4900 biotin--protein ligasechromosome CDS4982099 966 + 0.493789
citX ECs0653 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyasechromosome CDS728838 552 - 0.581522
coaE ECs0107 dephospho-CoA kinasechromosome CDS117088 621 - 0.52657
folE ECs3045 GTP cyclohydrolase Ichromosome CDS2977977 669 - 0.508221
lipB ECs0668 lipoyltransferasechromosome CDS742994 576 - 0.472222
moaC ECs0861 molybdenum cofactor biosynthesis protein Cchromosome CDS940935 486 + 0.561728
mogA ECs0009 molybdenum cofactor biosynthesis proteinchromosome CDS9323 588 + 0.539116
nadD ECs0677 nicotinic acid mononucleotide adenyltransferasechromosome CDS751289 642 - 0.495327
nadE ECs2446 NAD(+) synthetasechromosome CDS2421971 828 + 0.491546
panF ECs4130 sodium/panthothenate symporterchromosome CDS4142567 1452 + 0.539945
ribA ECs1850 GTP cyclohydrolase II proteinchromosome CDS1839277 591 - 0.500846
ribB ECs3929 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3929907 654 - 0.525994
ribH ECs0468 riboflavin synthase subunit betachromosome CDS498902 471 + 0.518047
thiC ECs4917 thiamine biosynthesis protein ThiCchromosome CDS5003029 1896 - 0.55538
thiE ECs4916 thiamine-phosphate pyrophosphorylasechromosome CDS5002394 636 - 0.578616
thiF ECs4915 thiamine biosynthesis protein ThiFchromosome CDS5001646 756 - 0.568783
thiG ECs4914 thiazole synthasechromosome CDS5000690 771 - 0.586252
 
Escherichia coli UTI89, UTI89
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA UTI89_C2705 putative enzymechromosome CDS2651524 1695 - 0.471386
NA UTI89_C3828 hypothetical proteinchromosome CDS3713485 201 + 0.557214
NA UTI89_C3461 putative iron compound permease protein of ABC transporter familychromosome CDS3394875 984 - 0.543699
NA UTI89_C3400 hypothetical proteinchromosome CDS3337091 1173 + 0.522592
NA UTI89_C1387 putative iron compound ABC transporter, permease proteinchromosome CDS1321990 981 - 0.546381
NA UTI89_C3460 putative iron compound permease protein of ABC transporter familychromosome CDS3393829 1050 - 0.509524
NA UTI89_C4038 putative ATP-binding protein of ABC transport systemchromosome CDS3921182 801 + 0.491885
NA UTI89_C2223 hypothetical proteinchromosome CDS2165689 735 + 0.341497
NA UTI89_C1386 putative iron compound ABC transporter, ATP-binding proteinchromosome CDS1321235 759 - 0.538867
NA UTI89_C4627 putative transporterchromosome CDS4521508 558 + 0.507168
NA UTI89_C4628 NadR transcriptional repressor / NMN adenylyltransferasechromosome CDS4522038 1023 + 0.512219
NA UTI89_C2263 putative ABC transporterchromosome CDS2202655 768 - 0.566406
NA UTI89_C4552 starvation sensing protein RspAchromosome CDS4442754 1215 + 0.499588
NA UTI89_C0682 putative pyridoxine phosphate biosynthetic proteinchromosome CDS687848 987 + 0.52077
acpT UTI89_C3991 4'-phosphopantetheinyl transferase AcpTchromosome CDS3879458 588 + 0.568027
apbA UTI89_C0448 2-dehydropantoate reductasechromosome CDS457723 912 - 0.51864
apbE UTI89_C2495 hypothetical proteinchromosome CDS2446794 1056 - 0.532197
bioA UTI89_C0772 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS771065 1401 - 0.552463
bioB UTI89_C0773 biotin synthasechromosome CDS772441 1041 + 0.54755
bioD UTI89_C0776 dethiobiotin synthetasechromosome CDS775367 678 + 0.547198
bioF UTI89_C0774 8-amino-7-oxononanoate synthasechromosome CDS773478 1155 + 0.579221
birA UTI89_C3803 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressorchromosome CDS3691063 966 - 0.490683
btuC UTI89_C1904 vitamin B12 transport permease proteinchromosome CDS1829758 981 - 0.553517
btuD UTI89_C1902 vitamin B12 transport ATP-binding protein BtuDchromosome CDS1828396 750 - 0.552
btuR UTI89_C1538 cob(I)alamin adenolsyltransferasechromosome CDS1448714 591 - 0.50423
chuW UTI89_C4034 putative oxygen independent coproporphyrinogen III oxidasechromosome CDS3917707 1338 + 0.521674
citG UTI89_C0615 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthasechromosome CDS629081 879 - 0.5438
citX UTI89_C0616 apo-citrate lyase phosphoribosyl-dephospho-CoA transferasechromosome CDS629934 552 - 0.585145
coaA UTI89_C3802 pantothenate kinasechromosome CDS3690063 972 + 0.440329
coaE UTI89_C0111 dephospho-CoA kinasechromosome CDS114922 621 - 0.523349
cobS UTI89_C2230 cobalamin 5'-phosphate synthase / cobalamin synthasechromosome CDS2170532 780 - 0.528205
cobT UTI89_C2229 CobT, subunit of dimethylbenzimidazole phosphoribosyltransferasechromosome CDS2169441 1080 - 0.512037
cobU UTI89_C2231 cobalamin biosynthesis protein CobUchromosome CDS2171272 546 - 0.503663
cysD UTI89_C3123 sulfate adenylyltransferase subunit 2chromosome CDS3037604 909 - 0.534653
cysG UTI89_C3872 multifunctional protein; Uroporphyrin-III C-methyltransferase; Ferrochelatase; Precorrin-2 oxidasechromosome CDS3755832 1374 + 0.540029
cysH UTI89_C3126 phosphoadenosine phosphosulfate reductasechromosome CDS3040343 735 - 0.510204
dfp UTI89_C4183 flavoprotein affecting synthesis of DNA and pantothenate metabolismchromosome CDS4071187 1293 + 0.528229
dgoA UTI89_C4243 bifunctional 2-oxo-3-deoxygalactonate 6-phosphate aldolase/galactonate dehydratasechromosome CDS4133419 1149 - 0.529156
dxs UTI89_C0443 1-deoxyxylulose-5-phosphate synthasechromosome CDS452434 1863 - 0.540526
entC UTI89_C0595 isochorismate synthasechromosome CDS608794 1188 + 0.557239
fepC UTI89_C0590 ferric enterobactin transport ATP-binding protein fepCchromosome CDS603491 816 - 0.547794
fepD UTI89_C0592 ferric enterobactin transport system permease protein fepDchromosome CDS605292 1017 - 0.599803
fepG UTI89_C0591 ferric enterobactin transport system permease protein fepGchromosome CDS604303 993 - 0.577039
fhuC UTI89_C0167 ferrichrome transport ATP-binding protein FhuCchromosome CDS175617 903 + 0.55814
folA UTI89_C0054 dihydrofolate reductasechromosome CDS52324 615 + 0.520325
folC UTI89_C2600 bifunctional folylpolyglutamate synthase/dihydrofolate synthasechromosome CDS2564087 1269 - 0.55792
folD UTI89_C0559 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS567893 867 - 0.545559
folE UTI89_C2427 FolE subunit of GTP cyclohydrolase Ichromosome CDS2384194 669 - 0.508221
folK UTI89_C0156 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS163299 480 - 0.495833
folP UTI89_C3609 7,8-dihydropteroate synthasechromosome CDS3543893 915 - 0.512568
folX UTI89_C2587 D-erythro-7,8-dihydroneopterin triphosphate epimerasechromosome CDS2553466 363 + 0.446281
fre UTI89_C4429 NAD(P)H-flavin reductasechromosome CDS4312921 735 + 0.521088
gcl UTI89_C0536 glyoxylate carboligasechromosome CDS544567 1872 + 0.525107
gclA UTI89_C5032 putative glycoxylate carboligase GclAchromosome CDS4932777 1740 - 0.477012
gshA UTI89_C3050 gamma-glutamate-cysteine ligasechromosome CDS2973683 1557 - 0.514451
gshB UTI89_C3336 glutathione synthetasechromosome CDS3269530 951 + 0.526814
gudD UTI89_C3157 glucarate dehydratasechromosome CDS3072501 1341 - 0.536913
hemA UTI89_C1404 glutamyl-tRNA reductasechromosome CDS1338833 1455 + 0.519588
hemB UTI89_C0388 delta-aminolevulinic acid dehydratasechromosome CDS404170 1008 - 0.539683
hemC UTI89_C4364 porphobilinogen deaminasechromosome CDS4249836 963 - 0.566978
hemD UTI89_C4363 uroporphyrinogen-III synthasechromosome CDS4249099 741 - 0.535762
hemE UTI89_C3822 uroporphyrinogen decarboxylasechromosome CDS3707542 1065 - 0.560563
hemF UTI89_C2769 coproporphyrinogen III oxidase, aerobicchromosome CDS2709656 903 + 0.548173
hemG UTI89_C4435 protoporphyrinogen oxidasechromosome CDS4320937 546 + 0.509158
hemH UTI89_C0503 ferrochelatase (heme synthetase)chromosome CDS512082 963 + 0.535826
hemL UTI89_C0170 glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS179423 1281 - 0.556596
hemN UTI89_C4456 oxygen-independent coproporphyrinogen III oxidasechromosome CDS4338197 1380 + 0.530435
hemY UTI89_C4361 protoheme IX synthesis late stage proteinchromosome CDS4246679 1197 - 0.550543
ilvB UTI89_C4227 acetolactate synthase isozyme I large subunitchromosome CDS4117113 1689 - 0.561279
ilvC UTI89_C4330 ketol-acid reductoisomerasechromosome CDS4218632 1626 + 0.52214
ilvE UTI89_C4326 branched-chain amino acid aminotransferasechromosome CDS4213354 930 + 0.54086
ilvG UTI89_C4324 acetohydroxy acid synthase IIchromosome CDS4211428 1647 + 0.540376
ilvI UTI89_C0085 acetolactate synthase isozyme III large subunitchromosome CDS87982 1815 + 0.527273
ispA UTI89_C0444 geranyltranstransferasechromosome CDS454321 900 - 0.538889
ispB UTI89_C3621 octaprenyl diphosphate synthasechromosome CDS3553383 972 + 0.52572
kbl UTI89_C4163 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS4053070 1197 - 0.54386
kdtB UTI89_C4177 phosphopantetheine adenylyltransferasechromosome CDS4068353 480 + 0.522917
ldhA UTI89_C1623 fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS1538099 990 - 0.50404
lipA UTI89_C0631 lipoate synthesis proteinchromosome CDS641702 966 - 0.536232
lipB UTI89_C0632 lipoate-protein ligase Bchromosome CDS643487 642 - 0.476636
lplA UTI89_C5157 lipoate-protein ligase Achromosome CDS5046795 1017 - 0.575221
menA UTI89_C4515 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4396421 939 - 0.534611
menB UTI89_C2545 dihydroxynaphtoic acid synthetasechromosome CDS2511982 858 - 0.539627
menC UTI89_C2544 O-succinylbenzoate-CoA synthasechromosome CDS2511020 963 - 0.597092
menD UTI89_C2548 Menaquinone biosynthesis protein MenDchromosome CDS2513609 1860 - 0.563978
menF UTI89_C2549 menaquinone-specific isochorismate synthasechromosome CDS2515368 1296 - 0.532407
menG UTI89_C4513 ribonuclease E inhibitor subunitchromosome CDS4395843 486 - 0.522634
metK UTI89_C3331 S-adenosylmethionine synthetasechromosome CDS3264333 1167 + 0.526992
moaA UTI89_C0780 molybdenum cofactor biosynthesis protein Achromosome CDS779906 1071 + 0.532213
moaB UTI89_C0781 molybdopterin biosynthesis, protein Bchromosome CDS780998 513 + 0.526316
moaC UTI89_C0783 molybdopterin biosynthesis, protein Cchromosome CDS781513 486 + 0.563786
moaD UTI89_C0784 molybdopterin converting factor subunit 1chromosome CDS781970 267 + 0.558052
moaE UTI89_C0785 molybdopterin converting factor subunit 2chromosome CDS782238 453 + 0.560706
mobA UTI89_C4444 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4327572 585 - 0.504274
mobB UTI89_C4443 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4327063 528 - 0.496212
modD UTI89_C1384 putative pyrophosphorylase ModDchromosome CDS1319562 855 - 0.519298
moeA UTI89_C0830 molybdopterin biosynthesis protein MoeAchromosome CDS826344 1236 - 0.563107
moeB UTI89_C0829 molybdopterin biosynthesis protein MoeBchromosome CDS825595 750 - 0.553333
mog UTI89_C0010 molybdopterin biosynthesis mog proteinchromosome CDS9189 591 + 0.541455
nadA UTI89_C0747 quinolinate synthetase Achromosome CDS745263 1044 + 0.506705
nadB UTI89_C2896 L-aspartate oxidasechromosome CDS2852162 1623 + 0.530499
nadC UTI89_C0117 nicotinate-nucleotide pyrophosphorylase (carboxylating)chromosome CDS120076 936 - 0.523504
nadE UTI89_C1934 NH(3)-dependent NAD(+) synthetasechromosome CDS1855920 828 + 0.495169
nadR UTI89_C5161 transcriptional regulator NadRchromosome CDS5050988 1254 + 0.50638
pabA UTI89_C3863 para-aminobenzoate synthase glutamine amidotransferase component IIchromosome CDS3748271 564 - 0.52305
pabB UTI89_C2008 para-aminobenzoate synthase component Ichromosome CDS1921494 1362 + 0.517621
pabC UTI89_C1222 4-amino-4-deoxychorismate lyasechromosome CDS1198263 810 + 0.507407
panB UTI89_C0148 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS154828 795 - 0.548428
panC UTI89_C0147 Pantoate-beta-alanine ligasechromosome CDS153965 852 - 0.5223
panD UTI89_C0144 aspartate 1-decarboxylasechromosome CDS152345 381 - 0.532808
panF UTI89_C3700 sodium/pantothenate symporterchromosome CDS3625557 1458 + 0.545267
pdxA UTI89_C0059 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS55625 990 - 0.556566
pdxH UTI89_C1829 pyridoxamine 5'-phosphate oxidasechromosome CDS1757512 657 - 0.51446
pdxJ UTI89_C2885 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS2842745 747 - 0.554217
pdxK UTI89_C2752 pyridoxine kinasechromosome CDS2696165 852 - 0.518779
pdxY UTI89_C1827 pyridoxamine kinasechromosome CDS1755187 864 - 0.519676
pncB UTI89_C1003 nicotinate phosphoribosyltransferasechromosome CDS993486 1251 - 0.515588
pnuC UTI89_C0748 PnuC NMN transporterchromosome CDS746344 720 + 0.483333
poxB UTI89_C0874 pyruvate dehydrogenasechromosome CDS870290 1719 - 0.531704
putP UTI89_C1079 sodium/proline symporterchromosome CDS1066236 1509 + 0.535454
ribA UTI89_C1548 GTP cyclohydrolase IIchromosome CDS1459503 654 - 0.489297
ribB UTI89_C3483 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3418555 654 - 0.530581
ribC UTI89_C1853 riboflavin synthase alpha chainchromosome CDS1778359 642 - 0.476636
ribD UTI89_C0436 diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductasechromosome CDS447699 1104 + 0.547101
ribF UTI89_C0027 riboflavin biosynthesis protein RibF; riboflavin kinase (flavokinase)chromosome CDS22934 942 + 0.529724
ribH UTI89_C0437 riboflavin synthase beta chainchromosome CDS448795 567 + 0.52381
rimK UTI89_C0855 ribosomal protein S6 modification proteinchromosome CDS853162 903 + 0.55814
serA UTI89_C3299 D-3-phosphoglycerate dehydrogenasechromosome CDS3234824 1233 - 0.522303
serC UTI89_C0978 phosphoserine aminotransferasechromosome CDS962159 1089 + 0.496786
tbpA UTI89_C0076 thiamine-binding periplasmic protein precursorchromosome CDS78163 996 - 0.513052
thiC UTI89_C3825 thiamine biosynthesis protein ThiCchromosome CDS3710211 1908 + 0.550839
thiD UTI89_C2377 phosphomethylpyrimidine kinasechromosome CDS2324474 801 - 0.546816
thiE UTI89_C3826 thiamine-phosphate pyrophosphorylasechromosome CDS3712115 639 + 0.583725
thiF UTI89_C3827 adenylyltransferase ThiFchromosome CDS3712731 771 + 0.560311
thiH UTI89_C3830 thiazole biosynthesis protein ThiHchromosome CDS3714454 1134 + 0.544974
thiL UTI89_C0440 thiamin-monophosphate kinasechromosome CDS449878 978 + 0.550102
thiM UTI89_C2378 hydroxyethylthiazole kinasechromosome CDS2325271 789 - 0.550063
thiP UTI89_C0075 thiamine transport system permease protein ThiPchromosome CDS76577 1611 - 0.580385
trpD UTI89_C1532 anthranilate synthase component IIchromosome CDS1440734 1596 - 0.563283
trpE UTI89_C1533 anthranilate synthase component Ichromosome CDS1442329 1563 - 0.542546
ubiA UTI89_C4610 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4501937 873 + 0.514318
ubiC UTI89_C4609 chorismate pyruvate lyasechromosome CDS4501427 498 + 0.524096
ubiE UTI89_C4420 ubiquinone/menaquinone biosynthesis methyltransferase ubiEchromosome CDS4305282 756 + 0.518519
ubiG UTI89_C2513 UbiG, subunit of 3-demethylubiquinone 3-methyltransferase / 2-octaprenyl-6-hydroxyphenol methylasechromosome CDS2475870 723 + 0.543568
ubiH UTI89_C3293 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3229985 1179 - 0.594572
ubiX UTI89_C2595 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2560197 570 - 0.529825
visC UTI89_C3292 protein VisCchromosome CDS3228760 1203 - 0.545303
ybbW UTI89_C0539 putative allantoin permeasechromosome CDS548375 1455 + 0.472852
ybdN UTI89_C0605 hypothetical protein YbdNchromosome CDS619211 1221 - 0.466011
ybeN UTI89_C0642 nicotinate-nucleotide adenylyltransferasechromosome CDS651782 705 - 0.489362
ybtS UTI89_C2178 putative salicylate synthetasechromosome CDS2071493 1305 - 0.551724
ycjG UTI89_C1596 hypothetical protein YcjGchromosome CDS1508185 966 + 0.540373
yfaW UTI89_C2529 hypothetical protein YfaWchromosome CDS2496229 1218 - 0.519704
ygcM UTI89_C3129 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS3044894 450 + 0.475556
ygdL UTI89_C3185 putative enzymechromosome CDS3099541 807 - 0.552664
ygfA UTI89_C3298 hypothetical protein YgfAchromosome CDS3233688 747 + 0.52075
yggC UTI89_C3316 hypothetical protein YggCchromosome CDS3250201 714 - 0.521008
yggW UTI89_C3344 hypothetical protein YggWchromosome CDS3274909 1137 + 0.524186
ygiG UTI89_C3494 dihydroneopterin aldolasechromosome CDS3432031 372 - 0.508065
yiaE UTI89_C4093 putative dehydrogenasechromosome CDS3984554 987 + 0.516717
yigC UTI89_C4428 putative oxidoreductasechromosome CDS4311415 1494 + 0.534137
yjcG UTI89_C4657 putative symporter YjcGchromosome CDS4552556 1650 - 0.549697
yleB UTI89_C0660 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS669885 1176 + 0.564626
ynfK UTI89_C1780 putative dethiobiotin synthetasechromosome CDS1706954 708 - 0.521186
ynjC UTI89_C1951 hypothetical ABC transporter permease protein ynjCchromosome CDS1870649 1560 + 0.56282
 
Escherichia coli W3110, K-12
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
abgT predicted cryptic aminobenzoyl-glutamate transporterchromosome CDS1401961 1527 - 0.492469
acpT holo-(acyl carrier protein) synthase 2chromosome CDS4026859 588 - 0.564626
bioA 7,8-diaminopelargonic acid synthase, PLP-dependentchromosome CDS808390 1290 - 0.562791
bioB biotin synthasechromosome CDS809766 1041 + 0.555235
bioD dethiobiotin synthetasechromosome CDS812692 678 + 0.536873
bioF 8-amino-7-oxononanoate synthasechromosome CDS810803 1155 + 0.580087
birA bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor, bio-5'-AMP-bindingchromosome CDS3462634 966 - 0.493789
btuB vitamin B12/cobalamin outer membrane transporterchromosome CDS3471198 1845 - 0.502439
btuC vitamin B12 transporter subunitchromosome CDS1795886 981 - 0.554536
btuD vitamin B12 transporter subunitchromosome CDS1794523 750 - 0.552
btuR cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferasechromosome CDS1329481 591 - 0.502538
citG triphosphoribosyl-dephospho-CoA transferasechromosome CDS645854 879 - 0.547213
citX apo-citrate lyase phosphoribosyl-dephospho-CoA transferasechromosome CDS646707 552 - 0.583333
coaA pantothenate kinasechromosome CDS3461655 951 + 0.440589
coaD pantetheine-phosphate adenylyltransferasechromosome CDS3830111 480 - 0.527083
coaE dephospho-CoA kinasechromosome CDS112599 621 - 0.52657
cobS cobalamin 5'-phosphate synthasechromosome CDS2066616 744 - 0.534946
cobT nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS2065525 1080 - 0.512963
cobU bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferasechromosome CDS2067356 546 - 0.505495
cysD sulfate adenylyltransferase, subunit 2chromosome CDS2874077 909 - 0.530253
cysG fused siroheme synthase 1,3-dimethyluroporphyriongen III dehydrogenase/siroheme ferrochelatase and uroporphyrinogen methyltransferasechromosome CDS4141215 1374 - 0.546579
cysH 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS2886234 735 - 0.507483
dfp fused 4'-phosphopantothenoylcysteine decarboxylase and phosphopantothenoylcysteine synthetase, FMN-bindingchromosome CDS3826464 1221 - 0.536446
dxs 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiringchromosome CDS437539 1863 - 0.542673
entC isochorismate synthase 1chromosome CDS624108 1176 + 0.564626
fecE iron-dicitrate transporter subunitchromosome CDS4515370 768 - 0.540365
fepC iron-enterobactin transporter subunitchromosome CDS618607 816 - 0.539216
fhuC iron-hydroxamate transporter subunitchromosome CDS169778 798 + 0.568922
folA dihydrofolate reductasechromosome CDS49823 480 + 0.527083
folB bifunctional dihydroneopterin aldolase and dihydroneopterin triphosphate 2'-epimerasechromosome CDS3202877 369 - 0.509485
folC bifunctional folylpolyglutamate synthase and dihydrofolate synthasechromosome CDS2437120 1269 - 0.560284
folD bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase and 5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS556098 867 - 0.543253
folE GTP cyclohydrolase Ichromosome CDS2246318 669 - 0.512706
folK 2-amino-4-hydroxy-6- hydroxymethyldihyropteridine pyrophosphokinasechromosome CDS157253 480 - 0.5
folP 7,8-dihydropteroate synthasechromosome CDS3323918 849 - 0.515901
folX D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolasechromosome CDS2426771 363 + 0.449036
fre flavin reductasechromosome CDS3609453 702 - 0.52849
gshA gamma-glutamate-cysteine ligasechromosome CDS2813539 1557 - 0.513166
gshB glutathione synthetasechromosome CDS3090534 951 + 0.534175
hemA glutamyl tRNA reductasechromosome CDS1265291 1257 + 0.543357
hemB porphobilinogen synthasechromosome CDS387977 975 - 0.539487
hemC hydroxymethylbilane synthasechromosome CDS3645915 942 + 0.561571
hemD uroporphyrinogen III synthasechromosome CDS3646853 741 + 0.529015
hemE uroporphyrinogen decarboxylasechromosome CDS3437901 1065 - 0.560563
hemF coproporphyrinogen III oxidasechromosome CDS2558671 900 + 0.546667
hemG protoporphyrin oxidase, flavoproteinchromosome CDS3601528 546 - 0.518315
hemH ferrochelatasechromosome CDS497279 963 + 0.538941
hemL glutamate-1-semialdehyde aminotransferasechromosome CDS173602 1281 - 0.555035
hemN coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independentchromosome CDS3583263 1374 - 0.531295
hemX uroporphyrinogen III methylasechromosome CDS3647615 1182 + 0.533841
hemY predicted protoheme IX synthesis proteinchromosome CDS3648799 1197 + 0.549708
ilvB acetolactate synthase I, large subunitchromosome CDS3787631 1689 + 0.563055
ilvC ketol-acid reductoisomerase, NAD(P)-bindingchromosome CDS3677236 1476 - 0.53794
ilvE branched-chain amino-acid aminotransferasechromosome CDS3683268 930 - 0.549462
ilvG chromosome pseudo3684477 1645 - 0.546505
ilvG chromosome pseudo3684477 1645 - 0.546505
ilvG chromosome pseudo3684477 1645 - 0.546505
ilvG chromosome pseudo3684477 1645 - 0.546505
ilvI acetolactate synthase III, large subunitchromosome CDS85630 1725 + 0.529275
ispA geranyltranstransferasechromosome CDS439426 900 - 0.542222
ispB octaprenyl diphosphate synthasechromosome CDS3333565 972 + 0.526749
kbl glycine C-acetyltransferasechromosome CDS3847864 1197 + 0.542189
ldhA fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS1443568 990 - 0.50101
lipA lipoate synthasechromosome CDS659673 966 - 0.534162
lipB lipoyl-protein ligasechromosome CDS662059 642 - 0.476636
lplA lipoate-protein ligase Achromosome CDS4627781 1017 - 0.578171
menA 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS3516332 927 + 0.533981
menB dihydroxynaphthoic acid synthetasechromosome CDS2380632 858 - 0.555944
menC o-succinylbenzoyl-CoA synthasechromosome CDS2379670 963 - 0.589823
menD bifunctional 2-oxoglutarate decarboxylase and SHCHC synthasechromosome CDS2382259 1671 - 0.581089
menF isochorismate synthase 2chromosome CDS2384018 1296 - 0.533951
metK methionine adenosyltransferase 1chromosome CDS3085362 1155 + 0.532468
mhpA 3-(3-hydroxyphenyl)propionate hydroxylasechromosome CDS367835 1665 + 0.56997
moaA molybdopterin biosynthesis protein Achromosome CDS817466 990 + 0.541414
moaB molybdopterin biosynthesis protein Bchromosome CDS818477 513 + 0.520468
moaC molybdopterin biosynthesis, protein Cchromosome CDS818992 486 + 0.559671
moaD molybdopterin synthase, small subunitchromosome CDS819470 246 + 0.556911
moaE molybdopterin synthase, large subunitchromosome CDS819717 453 + 0.567329
mobA molybdopterin-guanine dinucleotide synthasechromosome CDS3594682 585 + 0.500855
mobB molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3595263 513 + 0.487329
moeA molybdopterin biosynthesis proteinchromosome CDS865551 1236 - 0.563916
moeB molybdopterin synthase sulfurylasechromosome CDS864802 750 - 0.552
mog predicted molybdochelatasechromosome CDS9306 588 + 0.544218
nadA quinolinate synthase, subunit Achromosome CDS782507 1044 + 0.501916
nadB quinolinate synthase, L-aspartate oxidase (B protein) subunitchromosome CDS2709076 1623 + 0.531731
nadC quinolinate phosphoribosyltransferasechromosome CDS117752 894 - 0.53132
nadD nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependentchromosome CDS670353 642 - 0.5
nadE NAD synthetase, NH3/glutamine-dependentchromosome CDS1824172 828 + 0.495169
nadR bifunctional DNA-binding transcriptional repressor and NMN adenylyltransferasechromosome CDS4631995 1233 + 0.509327
oxc predicted oxalyl-CoA decarboxylasechromosome CDS2495702 1695 - 0.466077
paaK phenylacetyl-CoA ligasechromosome CDS1463839 1314 + 0.518265
pabA aminodeoxychorismate synthase, subunit IIchromosome CDS4149587 564 + 0.533688
pabB aminodeoxychorismate synthase, subunit Ichromosome CDS1896519 1362 + 0.509545
pabC 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complexchromosome CDS1154877 810 + 0.506173
panB 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS148807 795 - 0.545912
panC pantothenate synthetasechromosome CDS147944 852 - 0.526995
panD aspartate 1-decarboxylasechromosome CDS146314 381 - 0.524934
panE 2-dehydropantoate reductase, NADPH-specificchromosome CDS442828 912 - 0.51864
panF pantothenate:sodium symporterchromosome CDS3407462 1452 + 0.543388
pdxA 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependentchromosome CDS52427 990 - 0.563636
pdxB erythronate-4-phosphate dehydrogenasechromosome CDS2442161 1137 - 0.530343
pdxH pyridoxine 5'-phosphate oxidasechromosome CDS1719065 657 - 0.519026
pdxJ pyridoxine 5'-phosphate synthasechromosome CDS2699654 732 - 0.564208
pdxK pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinasechromosome CDS2541832 852 - 0.5223
pdxY pyridoxal kinase 2/pyridoxine kinasechromosome CDS1716740 864 - 0.530093
pncB nicotinate phosphoribosyltransferasechromosome CDS989576 1203 - 0.512053
pnuC predicted nicotinamide mononucleotide transporterchromosome CDS783588 720 + 0.481944
poxB pyruvate dehydrogenase (pyruvate oxidase), thiamin-dependent, FAD-bindingchromosome CDS909753 1719 - 0.54043
ribA GTP cyclohydrolase IIchromosome CDS1340284 591 - 0.500846
ribB 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS3182469 654 - 0.518349
ribC riboflavin synthase, alpha subunitchromosome CDS1744315 642 - 0.475078
ribD fused diaminohydroxyphosphoribosylaminopyrimidin e deaminase and 5-amino-6-(5-phosphoribosylamino) uracil reductasechromosome CDS432679 1104 + 0.553442
ribE riboflavin synthase beta chainchromosome CDS433871 471 + 0.522293
ribF bifunctional riboflavin kinase and FAD synthetasechromosome CDS21407 942 + 0.536093
rimK ribosomal protein S6 modification proteinchromosome CDS892389 903 + 0.562569
rraA ribonuclease E (RNase E) inhibitor proteinchromosome CDS3517351 486 + 0.522634
serA D-3-phosphoglycerate dehydrogenasechromosome CDS3055834 1233 - 0.529603
serC 3-phosphoserine/phosphohydroxythreonine aminotransferasechromosome CDS958075 1089 + 0.501377
tbpA thiamin transporter subunitchromosome CDS74497 984 - 0.53252
thiC thiamin (pyrimidine moiety) biosynthesis proteinchromosome CDS3440582 1896 + 0.557489
thiD bifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinasechromosome CDS2187050 801 - 0.554307
thiE thiamin phosphate synthasechromosome CDS3442477 636 + 0.580189
thiF thiamin (thiazole moiety) biosynthesis proteinchromosome CDS3443105 756 + 0.575397
thiG thiamin biosynthesis ThiGH complex subunitchromosome CDS3444046 771 + 0.584955
thiH thiamin biosynthesis ThiGH complex subunitchromosome CDS3444813 1134 + 0.550265
thiL thiamin-monophosphate kinasechromosome CDS434858 978 + 0.543967
thiM hydoxyethylthiazole kinasechromosome CDS2187847 789 - 0.541191
thiQ thiamin transporter subunitchromosome CDS72229 699 - 0.570815
thiS sulphur carrier proteinchromosome CDS3443844 201 + 0.557214
tiaE 2-keto-D-gluconate reductasechromosome CDS3922131 975 - 0.52
trpD fused glutamine amidotransferase (component II) of anthranilate synthase and anthranilate phosphoribosyl transferasechromosome CDS1321503 1596 - 0.56391
trpE component I of anthranilate synthasechromosome CDS1323098 1563 - 0.543826
ubiA p-hydroxybenzoate octaprenyltransferasechromosome CDS4256606 873 + 0.517755
ubiC chorismate pyruvate lyasechromosome CDS4256096 498 + 0.528112
ubiD 3-octaprenyl-4-hydroxybenzoate decarboxylasechromosome CDS3610200 1494 - 0.538153
ubiE bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferasechromosome CDS3617071 756 - 0.521164
ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenasechromosome CDS695523 1176 + 0.571429
ubiG bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylasechromosome CDS2344237 723 + 0.542185
ubiH 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-bindingchromosome CDS3050996 1179 - 0.59542
ubiX 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2433503 570 - 0.531579
visC predicted oxidoreductase, FAD/NAD(P)-binding domainchromosome CDS3049771 1203 - 0.54946
yagJ hypothetical proteinchromosome CDS290724 732 + 0.489071
ybbW predicted allantoin transporterchromosome CDS536857 1455 + 0.470103
ycjG L-Ala-D/L-Glu epimerasechromosome CDS1390644 966 + 0.546584
ydhR hypothetical proteinchromosome CDS1748414 306 + 0.447712
yfbN hypothetical proteinchromosome CDS2392380 717 - 0.390516
ygcM 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2890870 366 + 0.494536
ygdL hypothetical proteinchromosome CDS2943692 807 - 0.546468
ygfA predicted ligasechromosome CDS3054897 549 + 0.519126
yggC conserved hypothetical protein with nucleoside triphosphate hydrolase domainchromosome CDS3072632 714 - 0.502801
yggW predicted oxidoreductasechromosome CDS3095923 1137 + 0.532102
yieE predicted phosphopantetheinyl transferasechromosome CDS3742051 762 - 0.520997
ynfK predicted dethiobiotin synthetasechromosome CDS1668238 696 - 0.521552
yojL predicted thiamine biosynthesis lipoproteinchromosome CDS2313813 1056 - 0.534091
 
Escherichia coli, B171
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
orf74 pB171_074 hypothetical proteinpB171 CDS61793 2622 + 0.531655
 
Photorhabdus luminescens subsp. laumondii TTO1, TTO1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA plu1322 hypothetical proteinchromosome CDS1536760 1668 + 0.417866
NA plu2793 hypothetical proteinchromosome CDS3316907 705 + 0.455319
NA plu2324 hypothetical proteinchromosome CDS2740058 2934 + 0.470007
NA plu3307 hypothetical proteinchromosome CDS3922080 1074 - 0.443203
NA plu3919 hypothetical proteinchromosome CDS4596872 1743 - 0.432588
NA plu0743 hypothetical proteinchromosome CDS855414 552 + 0.414855
NA plu2794 hypothetical proteinchromosome CDS3317608 585 + 0.398291
NA plu2964 hypothetical proteinchromosome CDS3470879 558 - 0.442652
NA plu2260 beta alanine-pyruvate transaminasechromosome CDS2654312 1332 - 0.481231
NA plu0649 hypothetical proteinchromosome CDS746074 813 + 0.458795
NA plu1699 hypothetical proteinchromosome CDS2031465 417 - 0.527578
NA plu2851 hypothetical proteinchromosome CDS3385156 801 - 0.410737
NA plu2259 hypothetical proteinchromosome CDS2651780 2412 + 0.429519
NA plu3604 hypothetical proteinchromosome CDS4253581 597 + 0.447236
NA plu4193 hypothetical proteinchromosome CDS4907212 714 - 0.305322
NA plu2086 hypothetical proteinchromosome CDS2470852 942 + 0.453291
NA plu3563 hypothetical proteinchromosome CDS4198009 2076 - 0.445087
NA plu4078 hypothetical proteinchromosome CDS4764608 678 - 0.429204
NA plu3812 riboflavin synthase subunit alphachromosome CDS4478419 666 - 0.346847
NA plu4506 hypothetical proteinchromosome CDS5261647 891 + 0.410774
NA plu2968 hypothetical proteinchromosome CDS3474102 786 - 0.517812
NA plu1437 hypothetical proteinchromosome CDS1728044 1623 + 0.436229
NA plu4672 hypothetical proteinchromosome CDS5449216 1179 + 0.413062
NA plu2965 hypothetical proteinchromosome CDS3471459 669 - 0.48281
NA plu1743 hypothetical proteinchromosome CDS2078966 1314 - 0.453577
NA plu4179 hypothetical proteinchromosome CDS4884349 1272 - 0.504717
NA plu1176 coproporphyrinogen III oxidasechromosome CDS1360760 1131 - 0.456233
NA plu2192 hypothetical proteinchromosome CDS2580119 1119 + 0.455764
NA plu1515 hypothetical proteinchromosome CDS1814537 1059 - 0.295562
NA plu2936 hypothetical proteinchromosome CDS3449821 684 + 0.396199
NA plu1438 hypothetical proteinchromosome CDS1729837 774 + 0.447028
NA plu2474 hypothetical proteinchromosome CDS2914831 597 + 0.296482
NA plu2799 hypothetical proteinchromosome CDS3325286 543 + 0.392265
NA plu0702 hypothetical proteinchromosome CDS811020 363 - 0.460055
NA plu1173 hypothetical proteinchromosome CDS1357002 723 + 0.409405
NA plu2522 hypothetical proteinchromosome CDS2972808 417 - 0.484412
NA plu2236 hypothetical proteinchromosome CDS2630027 1236 - 0.447411
NA plu3042 hypothetical proteinchromosome CDS3541563 948 + 0.364979
NA plu2227 hypothetical proteinchromosome CDS2620291 708 + 0.375706
NA plu3430 hypothetical proteinchromosome CDS4046151 327 - 0.458716
NA plu4181 hypothetical proteinchromosome CDS4888057 1131 - 0.501326
NA plu3565 hypothetical proteinchromosome CDS4200468 1275 - 0.46902
NA plu4180 hypothetical proteinchromosome CDS4885650 2406 - 0.517872
NA plu1504 hypothetical proteinchromosome CDS1801468 1347 + 0.350408
abgT plu3724 Aminobenzoyl-glutamate transport proteinchromosome CDS4389400 1527 - 0.422397
apbA plu3882 2-dehydropantoate 2-reductasechromosome CDS4559031 873 + 0.419244
apbE plu1202 Thiamine biosynthesis lipoprotein ApbE precursorchromosome CDS1385740 1029 + 0.4276
bioA plu1484 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS1776856 1272 - 0.461478
bioB plu1485 biotin synthetase (biotin synthase)chromosome CDS1778222 1038 + 0.454721
bioD plu1488 dithiobiotin synthetasechromosome CDS1781154 681 + 0.415565
bioF plu1486 8-amino-7-oxononanoate synthasechromosome CDS1779259 1152 + 0.480903
birA plu4732 biotin--protein ligasechromosome CDS5503509 960 - 0.384375
btuB plu4735 Vitamin B12 receptor precursor protein BtuBchromosome CDS5512113 1860 - 0.408602
btuC plu2662 vtamin B12-transporter permeasechromosome CDS3115997 1008 - 0.433532
btuD plu2661 vitamin B12-transporter ATPasechromosome CDS3115217 777 - 0.419562
btuR plu2451 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS2878287 597 + 0.462312
cbiA plu2999 cobyrinic acid a,c-diamide synthasechromosome CDS3499135 1383 - 0.503977
cbiC plu2997 precorrin-8X methylmutasechromosome CDS3497532 633 - 0.530806
cbiD plu2996 cobalt-precorrin-6A synthasechromosome CDS3496399 1137 - 0.525066
cbiE plu2995 precorrin-6B methylasechromosome CDS3495800 603 - 0.500829
cbiF plu2993 Precorrin-4 C11-methyltransferase (precorrin-3-methylase)chromosome CDS3494475 774 - 0.524548
cbiG plu2992 cobalamin biosynthesis protein CbiGchromosome CDS3493433 1062 - 0.516008
cbiH plu2991 precorrin-3B C17-methyltransferasechromosome CDS3492714 726 - 0.476584
cbiJ plu2990 precorrin-6x reductasechromosome CDS3491932 786 - 0.505089
cbiK plu2989 Cobalt chelatasechromosome CDS3491124 795 - 0.483019
cbiL plu2988 precorrin-2 methyltransferasechromosome CDS3490411 714 - 0.490196
cbiP plu2987 cobyric acid synthasechromosome CDS3488683 1539 - 0.48538
cbiT plu2994 precorrin-8w decarboxylasechromosome CDS3495241 570 - 0.501754
coaA plu4731 pantothenate kinasechromosome CDS5502515 951 + 0.368034
coaD plu4856 phosphopantetheine adenylyltransferasechromosome CDS5631083 486 + 0.417695
coaE plu3641 dephospho-CoA kinasechromosome CDS4289398 624 + 0.413462
cobD plu2998 cobalamin biosynthesis proteinchromosome CDS3498179 960 - 0.526042
cobS plu2985 cobalamin synthasechromosome CDS3487398 747 - 0.516734
cobT plu2980 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS3484276 1050 - 0.501905
cobU plu2986 adenosylcobinamide kinasechromosome CDS3488141 546 - 0.505495
crtE plu4337 hypothetical proteinchromosome CDS5065885 903 + 0.435216
cysD plu0709 sulfate adenylyltransferase subunit 2chromosome CDS818336 909 + 0.453245
cysG plu0708 sirohaem synthasechromosome CDS816914 1413 + 0.478415
cysH plu0705 phosphoadenosine phosphosulfate reductasechromosome CDS815178 735 + 0.42585
dfp plu4866 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS5640130 1218 + 0.481117
dxs plu3887 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS4563031 1866 + 0.450161
fecE plu4450 Iron(III) dicitrate transport ATP-binding protein FecEchromosome CDS5199888 768 + 0.5
fepC plu4626 Ferric enterobactin transport ATP-binding protein FepCchromosome CDS5392776 813 + 0.451415
folA plu0606 dihydrofolate reductasechromosome CDS689390 486 + 0.430041
folB plu3974 dihydroneopterin aldolase (DHNA)chromosome CDS4660982 354 - 0.403955
folC plu3170 FolC bifunctional protein [Includes: Folylpolyglutamate synthase (Folylpoly-gamma-glutamate synthetase) (FPGS); Dihydrofolate synthase]chromosome CDS3730018 1299 - 0.474981
folD plu4317 bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolase]chromosome CDS5042175 876 - 0.471461
folE plu1543 GTP cyclohydrolase Ichromosome CDS1846362 660 + 0.45
folK plu0873 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokina sechromosome CDS999913 516 - 0.455426
folP plu4534 Dihydropteroate synthase (DHPS) (Dihydropteroate pyrophosphorylase)chromosome CDS5295883 846 - 0.42435
fre plu4404 NAD(P)H-flavin reductasechromosome CDS5152827 702 - 0.430199
gshA plu1252 glutamate--cysteine ligasechromosome CDS1449935 1560 + 0.421795
gshB plu1184 glutathione synthetasechromosome CDS1366819 951 - 0.457413
hemA plu2069 glutamyl-tRNA reductasechromosome CDS2450871 1263 + 0.463183
hemB plu4407 delta-aminolevulinic acid dehydratasechromosome CDS5156176 1014 - 0.453649
hemC plu4644 porphobilinogen deaminasechromosome CDS5413407 942 + 0.488323
hemD plu4645 uroporphyrinogen-III synthetasechromosome CDS5414345 741 + 0.445344
hemE plu0489 uroporphyrinogen decarboxylasechromosome CDS529034 1065 + 0.473239
hemF plu1383 coproporphyrinogen III oxidasechromosome CDS1663139 909 - 0.405941
hemG plu4398 protoporphyrinogen oxidase (PPO)chromosome CDS5145111 537 - 0.376164
hemH plu3835 ferrochelatase (protoheme ferro-lyase) (heme synthetase)chromosome CDS4506210 978 - 0.398773
hemL plu0902 glutamate-1-semialdehyde aminotransferasechromosome CDS1036929 1284 - 0.490654
hemN plu0230 coproporphyrinogen III oxidasechromosome CDS239949 1374 + 0.424309
hemX plu4646 uroporphyrin-III C-methyltransferase (urogen III methylase)chromosome CDS5415106 1125 + 0.430222
hemY plu4647 HemY proteinchromosome CDS5416234 1239 + 0.439871
ilvC plu4668 ketol-acid reductoisomerasechromosome CDS5443372 1479 - 0.462475
ilvE plu4683 branched-chain amino acid aminotransferasechromosome CDS5462063 927 - 0.445523
ilvG plu4685 acetolactate synthase II large subunitchromosome CDS5463267 1647 - 0.448695
ilvI plu3666 acetolactate synthase III large subunitchromosome CDS4315576 1728 - 0.445023
ispA plu3886 geranyltranstransferase (farnesyl-diphosphate synthase) FPP synthase)chromosome CDS4562051 918 + 0.444444
ispB plu4543 octaprenyl-diphosphate synthase (octaprenyl pyrophosphate synthetase) (OPP synthetase)chromosome CDS5304535 972 + 0.434156
kbl plu4846 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS5619769 1197 - 0.450292
ldhA plu2145 D-lactate dehydrogenasechromosome CDS2527112 1005 - 0.414925
lipA plu1291 lipoyl synthasechromosome CDS1499979 966 - 0.480331
lipB plu1292 lipoyltransferasechromosome CDS1501055 666 - 0.436937
menA plu4764 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS5546601 918 + 0.444444
menB plu3071 naphthoate synthasechromosome CDS3579838 858 - 0.454545
menC plu3070 O-succinylbenzoate synthasechromosome CDS3578867 972 - 0.495885
menD plu3073 2-oxoglutarate decarboxylasechromosome CDS3581470 1695 - 0.477286
menF plu3074 menaquinone-specific isochorismate synthasechromosome CDS3583269 1320 - 0.475
menG plu4765 ribonuclease activity regulator protein RraAchromosome CDS5547668 510 + 0.460784
metK plu3683 S-adenosylmethionine synthetasechromosome CDS4338372 1173 + 0.45439
moaA plu1499 molybdenum cofactor biosynthesis protein Achromosome CDS1797662 984 + 0.450203
moaC plu1500 molybdenum cofactor biosynthesis protein Cchromosome CDS1798685 480 + 0.470833
moaD plu1501 molybdopterin [mpt] converting factor, subunit 1 (molybdenum cofactor biosynthesis protein D) (molybdopterin converting factor small subunit)chromosome CDS1799161 246 + 0.463415
moaE plu1502 molybdopterin [MPT] converting factor, subunit 2 (molybdenum cofactor biosynthesis protein E) (molybdopterin converting factor large subunit)chromosome CDS1799410 453 + 0.479029
mobA plu0379 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS408768 600 - 0.421667
mobB plu0378 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS408253 519 - 0.433526
moeA plu1540 molybdopterin biosynthesis proteinchromosome CDS1842287 1242 - 0.460548
moeB plu1539 molybdopterin biosynthesis protein MoeBchromosome CDS1841535 753 - 0.456839
mogA plu0569 molybdenum cofactor biosynthesis proteinchromosome CDS645031 576 + 0.489583
nadA plu1468 quinolinate synthetasechromosome CDS1761308 1041 + 0.445725
nadB plu3347 L-aspartate oxidasechromosome CDS3974162 1605 + 0.466044
nadC plu3637 nicotinate-nucleotide pyrophosphorylasechromosome CDS4284984 891 + 0.414141
nadD plu1300 nicotinic acid mononucleotide adenyltransferasechromosome CDS1508573 678 - 0.457227
nadR plu0553 nicotinamide-nucleotide adenylyltransferasechromosome CDS624264 1257 + 0.407319
paaK plu3041 Phenylacetate-coenzyme A ligase (Phenylacetyl-CoA ligase) (PA-CoA ligase)chromosome CDS3540163 1404 + 0.378917
pabA plu0393 para-aminobenzoate synthase component IIchromosome CDS424719 576 + 0.427083
pabB plu2694 para-aminobenzoate synthase component Ichromosome CDS3195005 1371 + 0.417214
pabC plu2830 4-amino-4-deoxychorismate lyasechromosome CDS3360377 825 - 0.412121
panB plu0872 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS999051 792 - 0.445707
panC plu0871 pantoate--beta-alanine ligasechromosome CDS998170 855 - 0.453801
panD plu0870 aspartate 1-decarboxylase precursorchromosome CDS997722 381 - 0.454068
panF plu4086 sodium/panthothenate symporterchromosome CDS4773046 1452 + 0.479339
pcnB plu1754 nicotinate phosphoribosyltransferasechromosome CDS2092860 1215 - 0.443621
pdxA plu0610 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS691950 1020 - 0.470588
pdxB plu3175 erythronate-4-phosphate dehydrogenasechromosome CDS3734990 1128 - 0.453014
pdxH plu2597 pyridoxamine 5'-phosphate oxidasechromosome CDS3040318 654 - 0.426605
pdxJ plu3337 pyridoxal phosphate biosynthetic proteinchromosome CDS3964859 732 - 0.441257
pdxY plu2595 pyridoxine kinasechromosome CDS3037746 864 - 0.445602
pnuC plu1469 Protein PnuCchromosome CDS1762525 726 + 0.387052
ribA plu2431 GTP cyclohydrolase II proteinchromosome CDS2851997 609 + 0.412151
ribB plu3963 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS4648636 654 - 0.469419
ribD plu3899 riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase (riboflavin-specific deaminase); 5-amino-6-(5-phosphochromosome CDS4570883 1110 - 0.482883
ribE plu2610 riboflavin synthase subunit alphachromosome CDS3053334 678 - 0.415929
ribF plu0590 hypothetical proteinchromosome CDS670993 945 + 0.440212
ribH plu3898 riboflavin synthase subunit betachromosome CDS4570286 471 - 0.469214
serA plu3605 D-3-phosphoglycerate dehydrogenase (PGDH)chromosome CDS4254226 1242 - 0.433172
serC plu1619 phosphoserine aminotransferasechromosome CDS1934211 1089 + 0.439853
tbpA plu0619 Thiamine-binding periplasmic protein precursorchromosome CDS704606 1014 - 0.45858
thiC plu0486 thiamine biosynthesis protein ThiCchromosome CDS524964 1938 - 0.479876
thiD plu2782 phosphomethylpyrimidine kinasechromosome CDS3303156 798 - 0.483709
thiE plu0485 thiamine-phosphate pyrophosphorylasechromosome CDS524330 651 - 0.488479
thiF plu0484 thiamine biosynthesis protein ThiFchromosome CDS523570 750 - 0.48
thiG plu0482 thiazole synthasechromosome CDS522604 768 - 0.485677
thiH plu0481 thiamine biosynthesis protein ThiHchromosome CDS521465 1092 - 0.458791
thiL plu3896 thiamine monophosphate kinasechromosome CDS4568753 990 - 0.458586
thiQ plu0617 Thiamine transport ATP-binding proteinchromosome CDS702326 708 - 0.460452
thiS plu0483 sulfur carrier protein ThiSchromosome CDS523373 201 - 0.422886
trpE plu2462 anthranilate synthase component Ichromosome CDS2901650 1575 + 0.467937
trpG plu2463 Anthranilate synthase component II (Glutamine amido-transferase)chromosome CDS2903224 579 + 0.435233
ubiA plu4377 4-hydroxybenzoate octaprenyltransferasechromosome CDS5109931 867 - 0.441753
ubiC plu4378 Chorismate--pyruvate lyasechromosome CDS5110820 519 - 0.43738
ubiD plu4405 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (Polyprenyl p-hydroxybenzoate decarboxylase)chromosome CDS5153539 1482 - 0.447368
ubiE plu4413 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS5161313 756 - 0.424603
ubiF plu1313 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS1522956 1182 + 0.472081
ubiG plu3051 3-demethylubiquinone-9 3-methyltransferasechromosome CDS3555482 723 + 0.46473
ubiH plu3600 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS4249603 1179 - 0.476675
ubiX plu3166 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS3726461 585 - 0.454701
visC plu3599 hypothetical proteinchromosome CDS4248344 1221 - 0.475839
 
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, B67
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
sulI SC034 dihydropteroate synthetase typeIpSC138 CDS26779 840 + 0.616667
sulII SC048 dihydropteroate synthasepSC138 CDS37250 792 + 0.377525
tri SC030 dihydrofolate reductasepSC138 CDS24578 498 + 0.512048
 
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, SC-B67
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SC3288 putative inner membrane proteinchromosome CDS3472722 732 - 0.543716
NA SC0767 putative cytoplasmic proteinchromosome CDS862028 648 + 0.604938
NA SC3995 hypothetical proteinchromosome CDS4249367 291 - 0.436426
NA SC0970 hypothetical proteinchromosome CDS1090512 207 + 0.516908
NA SC2997 hypothetical proteinchromosome CDS3175308 1203 - 0.573566
NA SC1559 putative monooxygenasechromosome CDS1652136 468 - 0.547009
NA SC3905 putative periplasmic proteinchromosome CDS4157043 1026 - 0.499025
acpT SC3512 putative Phosphopantetheinyl transferasechromosome CDS3704787 579 + 0.585492
allP SC0561 Putative allantoin permeasechromosome CDS626790 1455 + 0.45567
apbA SC0475 2-dehydropantoate 2-reductasechromosome CDS531194 912 - 0.525219
apbE SC2270 putative thiamine biosynthesis lipoproteinchromosome CDS2378560 1053 - 0.566952
asrB SC2543 anaerobic sulfite reductase subunit Bchromosome CDS2708097 819 + 0.555556
bioA SC0791 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS887422 1392 - 0.567529
bioB SC0792 biotin synthetasechromosome CDS888798 1041 + 0.552354
bioD SC0795 dithiobiotin synthetasechromosome CDS891724 687 + 0.592431
bioD SC1507 dithiobiotin synthetasechromosome CDS1604605 696 + 0.521552
bioF SC0793 8-amino-7-oxononanoate synthasechromosome CDS889835 1158 + 0.605354
birA SC4026 biotin--protein ligasechromosome CDS4291714 963 + 0.49325
btuB SC4019 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS4282437 1887 + 0.514043
btuC SC1359 vtamin B12-transporter permeasechromosome CDS1455677 981 + 0.591233
btuD SC1361 vitamin B12-transporter ATPasechromosome CDS1457300 750 + 0.564
btuR SC1715 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS1828259 591 + 0.536379
cbiA SC2043 cobyrinic acid a,c-diamide synthasechromosome CDS2134161 1380 - 0.558696
cbiC SC2041 precorrin-8X methylmutasechromosome CDS2132562 633 - 0.554502
cbiD SC2040 cobalt-precorrin-6A synthasechromosome CDS2131423 1140 - 0.554386
cbiE SC2039 precorrin-6B methylasechromosome CDS2130824 606 - 0.579208
cbiF SC2037 synthesis of vitamin B12 adenosyl cobalamide precursorchromosome CDS2129499 774 - 0.571059
cbiG SC2036 cobalamin biosynthesis protein CbiGchromosome CDS2128463 1056 - 0.552083
cbiH SC2035 precorrin-3B C17-methyltransferasechromosome CDS2127738 726 - 0.564738
cbiJ SC2034 precorrin-6x reductasechromosome CDS2126950 792 - 0.593434
cbiK SC2033 synthesis of vitamin B12 adenosyl cobalamide precursorchromosome CDS2126153 795 - 0.555975
cbiL SC2032 precorrin-2 methyltransferasechromosome CDS2125443 714 - 0.57423
cbiP SC2027 cobyric acid synthasechromosome CDS2121421 1521 - 0.558843
cbiT SC2038 precorrin-8w decarboxylasechromosome CDS2130256 579 - 0.561313
citG SC0648 putative modifier of citrate lyase proteinchromosome CDS724957 897 - 0.603122
citG2 SC0057 putative modifier of citrate lyase proteinchromosome CDS67185 909 + 0.545655
citX SC0649 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyasechromosome CDS725825 552 - 0.61413
citX2 SC0056 putative cytoplasmic proteinchromosome CDS66707 501 + 0.55489
coaA SC4027 pantothenate kinasechromosome CDS4292711 957 - 0.454545
coaE SC0139 dephospho-CoA kinasechromosome CDS159265 621 - 0.542673
cobD SC2042 cobalamin biosynthesis proteinchromosome CDS2133205 960 - 0.590625
cobS SC2025 cobalamin synthasechromosome CDS2120139 744 - 0.56586
cobT SC2024 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2119042 1101 - 0.587648
cobU SC2026 adenosylcobinamide kinasechromosome CDS2120879 546 - 0.551282
cysD SC2867 sulfate adenylyltransferase subunit 2chromosome CDS3029313 909 - 0.530253
cysG SC3411 siroheme synthase, catalyses four separate reactions that are required for the transformation of uroporphyrinogen III into sirohemechromosome CDS3581824 1374 + 0.57933
cysH SC2877 phosphoadenosine phosphosulfate reductasechromosome CDS3041837 735 - 0.556463
dciP SC2408 putative thiamine pyrophosphate enzymechromosome CDS2536115 1653 - 0.594676
dfp SC3653 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS3865818 1224 + 0.553105
dxs SC0463 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS519044 1863 - 0.553409
entC SC0626 isochorismate synthasechromosome CDS698878 1107 + 0.585366
fepC SC0621 ABC s+uperfamily (atp_bind), enterobactin transporterchromosome CDS693339 795 - 0.566038
fhuC SC0769 putative ABC-type cobalamin/Fe3+-siderophores transport system, ATPase componentchromosome CDS864134 777 + 0.56242
fhuC SC0192 ABC superfamily (atp_bind), hydroxymate-dependent iron transportchromosome CDS222053 828 + 0.589372
fimY SC0589 putative regulatory proteinchromosome CDS657182 723 - 0.467497
folA SC0082 dihydrofolate reductase type I; trimethoprim resistancechromosome CDS95057 480 + 0.5375
folB SC3153 dihydroneopterin aldolase, also has dihydroneopterin triphosphate 2'-epimerase activitychromosome CDS3333561 363 - 0.504132
folC SC2367 multifunctional folylpolyglutamate synthase; dihydrofolate synthase, also has formylTHF polyglutamate synthase activitychromosome CDS2491764 1269 - 0.582348
folD SC0581 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS647051 867 - 0.54902
folE SC2209 GTP cyclohydrolase Ichromosome CDS2312957 669 - 0.521674
folK SC0183 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase, PPPKchromosome CDS209504 480 - 0.575
fre SC3877 NAD(P)H-flavin reductasechromosome CDS4119394 702 + 0.524217
gshA SC2753 glutamate--cysteine ligasechromosome CDS2921619 1557 - 0.5228
gshB SC3035 glutathione synthetasechromosome CDS3216430 948 + 0.543249
hemA SC1771 glutamyl-tRNA reductasechromosome CDS1887434 1257 - 0.566428
hemB SC0413 delta-aminolevulinic acid dehydratasechromosome CDS468222 975 - 0.553846
hemC SC3839 porphobilinogen deaminasechromosome CDS4080845 963 - 0.583593
hemD SC3838 uroporphyrinogen-III synthetasechromosome CDS4080108 741 - 0.576248
hemE SC4048 uroporphyrinogen decarboxylasechromosome CDS4317720 1065 + 0.573709
hemF SC2450 coproporphyrinogen III oxidasechromosome CDS2576966 900 + 0.572222
hemG SC3883 protoporphyrin oxidasechromosome CDS4129368 546 + 0.507326
hemH SC0531 ferrochelatasechromosome CDS591272 963 + 0.568017
hemL SC0202 glutamate-1-semialdehyde aminotransferasechromosome CDS233324 1281 - 0.587822
hemN SC3903 coproporphyrinogen III oxidasechromosome CDS4154932 1242 - 0.480676
hemN SC3896 coproporphyrinogen III oxidasechromosome CDS4145247 1374 + 0.517467
hemX SC3837 uroporphyrinogen III methylasechromosome CDS4078917 1170 - 0.55812
hemY SC3836 HemYchromosome CDS4077718 1200 - 0.578333
ilvB SC3716 acetolactate synthase large subunitchromosome CDS3935572 1689 - 0.560687
ilvC SC3814 ketol-acid reductoisomerasechromosome CDS4052506 1476 + 0.565041
ilvE SC3808 branched-chain amino acid aminotransferasechromosome CDS4046027 930 + 0.547312
ilvI SC0113 acetolactate synthase III large subunitchromosome CDS130191 1701 + 0.545561
ispA SC0464 geranyltranstransferase (farnesyldiphosphate synthase)chromosome CDS520930 900 - 0.574444
ispB SC3243 octaprenyl diphosphate synthasechromosome CDS3427913 1146 + 0.519197
kbl SC3632 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS3846218 1197 - 0.559733
kdtB SC3648 phosphopantetheine adenylyltransferasechromosome CDS3862925 480 + 0.529167
ldhA SC1642 D-lactate dehydrogenasechromosome CDS1753212 990 + 0.514141
lipA SC0662 lipoyl synthasechromosome CDS737409 966 - 0.548654
lipB SC0664 lipoyltransferasechromosome CDS739835 576 - 0.496528
lplA SC4420 lipoate-protein ligase Achromosome CDS4729681 1017 - 0.566372
menA SC3979 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS4231193 930 - 0.554839
menB SC2307 naphthoate synthasechromosome CDS2428278 858 - 0.566434
menC SC2306 O-succinylbenzoate synthasechromosome CDS2427316 963 - 0.600208
menD SC2309 2-oxoglutarate decarboxylasechromosome CDS2429905 1671 - 0.59605
menF SC2310 menaquinone-specific isochorismate synthasechromosome CDS2431661 1296 - 0.568673
menG SC3978 ribonuclease activity regulator protein RraAchromosome CDS4230615 486 - 0.545267
metK SC3030 S-adenosylmethionine synthetasechromosome CDS3211182 1155 + 0.542857
moaA SC0800 molybdenum cofactor biosynthesis protein Achromosome CDS899203 1023 + 0.535679
moaB SC0801 molybdopterin biosynthesis, protein Bchromosome CDS900247 513 + 0.555556
moaC SC0802 molybdenum cofactor biosynthesis protein Cchromosome CDS900762 486 + 0.555556
moaD SC0803 molybdopterin biosynthesis proteinchromosome CDS901240 246 + 0.585366
moaE SC0804 molybdopterin converting factor, subunit 2chromosome CDS901487 453 + 0.607064
mobA SC3887 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4136274 585 - 0.562393
mobB SC3886 molybdopterin-guanine dinucleotide biosynthesis protein B, GTP-bindingchromosome CDS4135762 531 - 0.495292
moeA SC0841 molybdopterin biosynthesis proteinchromosome CDS942123 1236 - 0.579288
moeB SC0840 molybdopterin biosynthesis protein MoeBchromosome CDS941374 750 - 0.568
mogA SC0008 molybdenum cofactor biosynthesis proteinchromosome CDS8729 591 + 0.56176
nadA SC0755 quinolinate synthetasechromosome CDS848878 1044 + 0.555556
nadB SC2646 L-aspartate oxidasechromosome CDS2797652 1623 + 0.556377
nadC SC0144 nicotinate-nucleotide pyrophosphorylasechromosome CDS164431 936 - 0.566239
nadD SC0675 nicotinic acid mononucleotide adenyltransferasechromosome CDS749393 642 - 0.545171
nadE SC1331 NAD(+) synthetasechromosome CDS1428782 828 - 0.530193
nadR SC4425 nicotinamide-nucleotide adenylyltransferasechromosome CDS4734077 1233 + 0.510949
nhg SC2192 salicylate hydroxylasechromosome CDS2294285 1194 - 0.586265
nin SC0342 Nin-like proteinchromosome CDS388012 873 + 0.462772
pabA SC3403 para-aminobenzoate synthase component IIchromosome CDS3574198 564 - 0.547872
pabB SC1818 para-aminobenzoate synthase component Ichromosome CDS1936342 1365 + 0.554579
pabC SC1148 4-amino-4-deoxychorismate lyasechromosome CDS1263173 810 + 0.516049
pad SC2851 putative flavoproteinchromosome CDS3016801 594 + 0.577441
panB SC0182 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS208592 792 - 0.565657
panC SC0181 pantoate--beta-alanine ligasechromosome CDS207612 855 - 0.549708
panD SC0180 aspartate 1-decarboxylase precursorchromosome CDS207137 381 - 0.532808
panE SC2568 2-dehydropantoate 2-reductasechromosome CDS2738937 918 - 0.491285
panF SC3320 sodium/panthothenate symporterchromosome CDS3507000 1452 + 0.550276
pdxA SC0163 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS188521 984 + 0.554878
pdxA SC0086 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS97699 990 - 0.584848
pdxB SC2372 erythronate-4-phosphate dehydrogenasechromosome CDS2496765 1251 - 0.553957
pdxH SC1466 pyridoxamine 5'-phosphate oxidasechromosome CDS1560389 657 + 0.550989
pdxJ SC2573 pyridoxal phosphate biosynthetic proteinchromosome CDS2742904 732 - 0.579235
pdxK SC2433 pyridoxine kinasechromosome CDS2563305 867 - 0.568627
pdxY SC1468 pyridoxine kinasechromosome CDS1562506 861 + 0.547038
pncB SC0962 nicotinate phosphoribosyltransferasechromosome CDS1082109 1251 - 0.541167
pnuC SC0756 NMN family, nucleoside/purine/pyrimidine transporterchromosome CDS849946 720 + 0.5
poxB SC0890 pyruvate dehydrogenasechromosome CDS995129 1719 - 0.571262
ptpS SC2880 putative synthasechromosome CDS3046581 363 + 0.528926
ribA SC1706 GTP cyclohydrolase II proteinchromosome CDS1817240 591 + 0.505922
ribB SC3141 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3319929 654 - 0.556575
ribD SC0457 pyrimidine deaminase/reductasechromosome CDS514255 1104 + 0.601449
ribE SC1445 riboflavin synthase subunit alphachromosome CDS1541240 642 + 0.510903
ribF SC0039 hypothetical proteinchromosome CDS47126 939 + 0.569755
ribH SC0458 riboflavin synthase subunit betachromosome CDS515447 471 + 0.543524
rimK SC0868 ribosomal protein S6 modification proteinchromosome CDS974308 903 + 0.563677
serA SC3003 D-3-phosphoglycerate dehydrogenasechromosome CDS3181449 1233 - 0.553122
serC SC0931 phosphoserine aminotransferasechromosome CDS1045428 1089 + 0.532599
tbpA SC0102 thiamine-binding periplasmic proteinchromosome CDS119700 984 - 0.550813
thiC SC4045 thiamine biosynthesis protein ThiCchromosome CDS4314066 1896 - 0.583861
thiD SC2161 phosphomethylpyrimidine kinasechromosome CDS2262779 801 - 0.598002
thiE SC4044 thiamine-phosphate pyrophosphorylasechromosome CDS4313431 636 - 0.600629
thiF SC4043 thiamine biosynthesis protein ThiFchromosome CDS4312680 759 - 0.587615
thiG SC4042 thiazole synthasechromosome CDS4311727 1029 - 0.621963
thiH SC4041 thiamine biosynthesis protein ThiHchromosome CDS4310597 1134 - 0.579365
thiL SC0460 thiamine monophosphate kinasechromosome CDS516436 981 + 0.56473
thiM SC2162 hydroxyethylthiazole kinasechromosome CDS2263566 798 - 0.612782
trpD SC1720 anthranilate phosphoribosyltransferasechromosome CDS1833244 1596 + 0.572682
trpE SC1719 anthranilate synthase component Ichromosome CDS1831682 1563 + 0.580934
ubiA SC4113 4-hydroxybenzoate octaprenyltransferasechromosome CDS4389826 873 + 0.549828
ubiC SC4112 chorismate pyruvate lyasechromosome CDS4389315 498 + 0.540161
ubiE SC3868 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4111523 756 + 0.484127
ubiF SC0699 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS778589 1176 + 0.60119
ubiG SC2279 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2394547 780 + 0.542308
ubiH SC2998 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3176633 1179 - 0.608991
ubiX SC2358 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2480992 570 - 0.550877
vdcC SC2852 putative 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylasechromosome CDS3017394 1428 + 0.552521
yabJ SC0100 putative ABC-transport proteinchromosome CDS117423 708 - 0.574859
ycdW SC1083 paral putative oxidoreductasechromosome CDS1205151 939 + 0.549521
ygdL SC2927 paral putative enzymechromosome CDS3098536 807 - 0.562577
ygfA SC3002 putative ligasechromosome CDS3180471 597 + 0.569514
yggW SC3044 coproporphyrinogen III oxidasechromosome CDS3222566 1176 + 0.547619
yiaE SC3578 2-hydroxyacid dehydrogenasechromosome CDS3784468 975 + 0.56718
yieE SC3762 putative cytoplasmic proteinchromosome CDS3990997 756 + 0.527778
yigC SC3876 putative oxidoreductasechromosome CDS4117830 1479 + 0.538202
 
Salmonella enterica subsp. enterica serovar Newport str. SL254, SL254
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SNSL254_pSN254_0006 phosphoadenosine phosphosulfate reductase family proteinpSN254 CDS3728 984 - 0.523374
sul1 SNSL254_pSN254_0151 dihydropteroate synthase 1pSN254 CDS133961 840 + 0.616667
sul2 SNSL254_pSN254_0047 dihydropteroate synthase 2pSN254 CDS31579 816 - 0.607843
 
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, ATCC 9150
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SPA3217 putative inner membrane proteinchromosome CDS3324539 732 - 0.546448
NA SPA0166 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS194688 984 + 0.550813
NA SPA1981 ABC transporter ATP-binding proteinchromosome CDS2063799 777 - 0.566281
NA SPA3853 coproporphyrinogen III oxidasechromosome CDS3998921 1242 - 0.479066
NA SPA0676 salicylate hydroxylasechromosome CDS758297 1194 + 0.592965
NA SPA2778 hypothetical proteinchromosome CDS2876139 2022 + 0.558358
NA SPA3752 putative membrane transport proteinchromosome CDS3896490 729 + 0.507545
NA SPA0063 hypothetical proteinchromosome CDS72332 552 + 0.561594
NA SPA0455 putative decarboxylasechromosome CDS520942 1653 + 0.594071
NA SPA0292 2-dehydropantoate 2-reductasechromosome CDS327273 918 + 0.485839
apbA SPA2289 2-dehydropantoate 2-reductasechromosome CDS2385359 912 + 0.526316
asrB SPA0317 anaerobic sulfite reductase subunit Bchromosome CDS358356 819 - 0.557998
bioA SPA1959 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS2039987 1290 + 0.585271
bioB SPA1958 biotin synthetasechromosome CDS2038860 1041 - 0.552354
bioD SPA1955 dithiobiotin synthetasechromosome CDS2036288 687 - 0.588064
bioD SPA1365 dithiobiotin synthetasechromosome CDS1445134 696 - 0.520115
bioF SPA1957 8-amino-7-oxononanoate synthasechromosome CDS2037706 1158 - 0.606218
birA SPA3977 biotin--protein ligasechromosome CDS4131326 963 + 0.496366
btuB SPA3968 vitamin B12 receptor proteinchromosome CDS4121860 1845 + 0.520867
btuC SPA1503 vtamin B12-transporter permeasechromosome CDS1578289 981 - 0.594292
btuD SPA1501 vitamin B12-transporter ATPasechromosome CDS1576897 750 - 0.566667
btuR SPA1158 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS1226625 591 - 0.546531
cbiC SPA0838 precorrin-8X methylmutasechromosome CDS934371 633 + 0.554502
cbiD SPA0839 cobalt-precorrin-6A synthasechromosome CDS935003 1140 + 0.55614
cbiE SPA0840 precorrin-6B methylasechromosome CDS936136 606 + 0.580858
cbiF SPA0842 precorrin-4 C11-methyltransferasechromosome CDS937293 774 + 0.572351
cbiG SPA0843 cobalamin biosynthesis protein CbiGchromosome CDS938047 1056 + 0.55303
cbiH SPA0844 precorrin-3B C17-methyltransferasechromosome CDS939102 726 + 0.566116
cbiJ SPA0845 precorrin-6x reductasechromosome CDS939824 792 + 0.597222
cbiK SPA0846 synthesis of vitamin B12 adenosyl cobalamide precursorchromosome CDS940618 792 + 0.550505
cbiL SPA0847 precorrin-2 methyltransferasechromosome CDS941406 714 + 0.578431
cbiP SPA0852 cobyric acid synthasechromosome CDS944621 1521 + 0.558185
cbiT SPA0841 precorrin-8w decarboxylasechromosome CDS936731 579 + 0.564767
citG SPA2115 CitG proteinchromosome CDS2199148 897 + 0.61204
citG SPA0064 CitG proteinchromosome CDS72861 909 + 0.547855
citX SPA2114 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyasechromosome CDS2198757 420 + 0.62619
coaA SPA3978 pantothenate kinasechromosome CDS4132323 951 - 0.454259
coaD SPA3577 phosphopantetheine adenylyltransferasechromosome CDS3709283 480 + 0.53125
coaE SPA0144 dephospho-CoA kinasechromosome CDS166437 621 - 0.542673
cobD SPA0837 cobalamin biosynthesis proteinchromosome CDS933401 960 + 0.59375
cobS SPA0854 cobalamin synthasechromosome CDS946680 744 + 0.567204
cobT SPA0855 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS947450 1071 + 0.593838
cobU SPA0853 adenosylcobinamide kinasechromosome CDS946138 546 + 0.549451
cysD SPA2791 sulfate adenylyltransferase subunit 2chromosome CDS2887349 909 - 0.524752
cysG SPA3343 siroheme synthasechromosome CDS3433787 1374 + 0.577147
cysH SPA2802 phosphoadenosine phosphosulfate reductasechromosome CDS2900352 735 - 0.571429
dfp SPA3582 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS3712180 1221 + 0.551188
dxs SPA2301 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS2396558 1863 + 0.553945
entC SPA2139 isochorismate synthasechromosome CDS2225062 1170 - 0.587179
fepC SPA2144 ferric enterobactin transport ATP-binding protein FepCchromosome CDS2230913 795 + 0.56478
fhuC SPA0198 ferrichrome transport ATP-binding protein FhuCchromosome CDS230241 798 + 0.593985
fimY SPA2175 fimbriae Y proteinchromosome CDS2262352 723 + 0.466113
folA SPA0088 dihydrofolate reductase type Ichromosome CDS100735 480 + 0.535417
folB SPA3074 dihydroneopterin aldolasechromosome CDS3181945 363 - 0.498623
folC SPA0499 folylpolyglutamate synthasechromosome CDS569287 1269 + 0.583924
folD SPA2183 FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolasechromosome CDS2270985 867 + 0.547866
folE SPA0658 GTP cyclohydrolase Ichromosome CDS740149 669 + 0.523169
folK SPA0189 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS217624 480 - 0.583333
folP SPA3162 dihydropteroate synthasechromosome CDS3271204 849 - 0.534747
gshA SPA2677 glutamate--cysteine ligasechromosome CDS2782762 1557 - 0.520873
gshB SPA2958 glutathione synthetasechromosome CDS3066298 948 + 0.541139
hemA SPA1096 glutamyl-tRNA reductasechromosome CDS1166415 1257 + 0.570406
hemB SPA2351 delta-aminolevulinic acid dehydratasechromosome CDS2448397 975 + 0.549744
hemC SPA3779 porphobilinogen deaminasechromosome CDS3923263 942 - 0.581741
hemD SPA3778 uroporphyrinogen-III synthetasechromosome CDS3922526 741 - 0.577598
hemE SPA4004 uroporphyrinogen decarboxylasechromosome CDS4156451 1065 + 0.579343
hemF SPA0415 coproporphyrinogen III oxidasechromosome CDS486014 927 - 0.565264
hemG SPA3827 protoporphyrinogen oxidasechromosome CDS3973364 546 + 0.505495
hemH SPA2233 ferrochelatasechromosome CDS2325188 963 - 0.569055
hemL SPA0208 glutamate-1-semialdehyde aminotransferasechromosome CDS241483 1281 - 0.587041
hemN SPA3845 coproporphyrinogen III oxidasechromosome CDS3989237 1374 + 0.515284
hemX SPA3777 uroporphyrinogen III methylasechromosome CDS3921335 1170 - 0.557265
hemY SPA3776 Porphyrin biosynthetic proteinchromosome CDS3920136 1197 - 0.577277
ilvB SPA3646 acetolactate synthase large subunitchromosome CDS3784116 1689 - 0.561279
ilvC SPA3748 ketol-acid reductoisomerasechromosome CDS3893024 1476 + 0.558943
ilvE SPA3742 branched-chain amino acid aminotransferasechromosome CDS3886548 930 + 0.547312
ilvG SPA3740 acetolactate synthase II large subunitchromosome CDS3884624 1647 + 0.558591
ilvI SPA0118 acetolactate synthase III large subunitchromosome CDS137339 1725 + 0.546667
ispA SPA2300 geranyltranstransferasechromosome CDS2395635 900 + 0.574444
ispB SPA3172 octaprenyl-diphosphate synthasechromosome CDS3280814 972 + 0.536008
kbl SPA3561 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS3691863 1197 - 0.563074
ldhA SPA1239 D-lactate dehydrogenasechromosome CDS1308203 990 - 0.514141
lipA SPA2101 lipoyl synthasechromosome CDS2186623 966 + 0.549689
lipB SPA2099 lipoyltransferasechromosome CDS2184587 576 + 0.498264
lplA SPA4386 lipoate-protein ligase Achromosome CDS4559215 1017 - 0.572271
menA SPA3933 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS4076202 930 - 0.552688
menB SPA0556 naphthoate synthasechromosome CDS630435 858 + 0.564103
menC SPA0557 O-succinylbenzoate synthasechromosome CDS631292 963 + 0.602285
menD SPA0554 2-oxoglutarate decarboxylasechromosome CDS627995 1671 + 0.597846
menF SPA0553 menaquinone-specific isochorismate synthasechromosome CDS626614 1296 + 0.56713
menG SPA3932 ribonuclease activity regulator protein RraAchromosome CDS4075624 486 - 0.553498
metK SPA2953 S-adenosylmethionine synthetasechromosome CDS3061051 1155 + 0.54026
moaA SPA1950 molybdenum cofactor biosynthesis protein Achromosome CDS2028473 990 - 0.537374
moaB SPA1949 molybdenum cofactor biosynthesis protein Bchromosome CDS2027939 513 - 0.555556
moaC SPA1948 molybdenum cofactor biosynthesis protein Cchromosome CDS2027451 486 - 0.539095
moaD SPA1947 molybdopterin converting factor, subunit 1chromosome CDS2027213 252 - 0.575397
moaE SPA1946 molybdopterin converting factor, subunit 2chromosome CDS2026759 453 - 0.609272
mobA SPA3835 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS3980275 585 - 0.548718
mobB SPA3834 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3979763 516 - 0.503876
moeA SPA1909 molybdopterin biosynthesis MoeA proteinchromosome CDS1986104 1236 + 0.578479
moeB SPA1910 molybdopterin biosynthesis protein MoeBchromosome CDS1987363 726 + 0.57438
mogA SPA0008 molybdenum cofactor biosynthesis proteinchromosome CDS8728 591 + 0.558376
nadA SPA1987 quinolinate synthetasechromosome CDS2069355 1044 - 0.552682
nadB SPA0277 L-aspartate oxidasechromosome CDS313108 1623 - 0.551448
nadC SPA0149 nicotinate-nucleotide pyrophosphorylasechromosome CDS171603 894 - 0.579418
nadD SPA2089 nicotinic acid mononucleotide adenyltransferasechromosome CDS2174977 642 + 0.546729
nadE SPA1534 NAD(+) synthetasechromosome CDS1607894 828 + 0.528986
nadR SPA4390 nicotinamide-nucleotide adenylyltransferasechromosome CDS4563584 1260 + 0.507937
pabA SPA3335 para-aminobenzoate synthase component IIchromosome CDS3426149 564 - 0.547872
pabB SPA1049 para-aminobenzoate synthase component Ichromosome CDS1119602 1365 - 0.556044
pabC SPA1653 4-amino-4-deoxychorismate lyasechromosome CDS1717582 810 - 0.517284
panB SPA0188 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS216712 792 - 0.578283
panC SPA0187 pantoate--beta-alanine ligasechromosome CDS215732 855 - 0.549708
panD SPA0186 aspartate 1-decarboxylase precursorchromosome CDS215257 381 - 0.535433
panF SPA3249 sodium/panthothenate symporterchromosome CDS3358790 1452 + 0.548898
pdxA SPA0092 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS103377 990 - 0.586869
pdxB SPA0494 erythronate-4-phosphate dehydrogenasechromosome CDS564418 1137 + 0.567282
pdxH SPA1405 pyridoxamine 5'-phosphate oxidasechromosome CDS1488937 657 - 0.546423
pdxJ SPA0287 pyridoxal phosphate biosynthetic proteinchromosome CDS323494 732 + 0.576503
pdxK SPA0430 pyridoxine kinasechromosome CDS499044 867 + 0.56286
pdxY SPA1403 pyridoxine kinasechromosome CDS1486616 861 - 0.5482
pncB SPA1794 nicotinate phosphoribosyltransferasechromosome CDS1854449 1203 + 0.541147
pnuC SPA1986 pnuC proteinchromosome CDS2068611 720 - 0.506944
poxB SPA1864 pyruvate dehydrogenasechromosome CDS1941845 1719 + 0.570681
ptpS SPA2805 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2905109 363 + 0.520661
rfbI SPA0773 CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS863531 975 + 0.410256
ribA SPA1165 GTP cyclohydrolase II proteinchromosome CDS1237642 591 - 0.505922
ribB SPA3063 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3168312 654 - 0.561162
ribD SPA2307 riboflavin biosynthesis protein RibDchromosome CDS2402103 1104 - 0.600543
ribE SPA1427 riboflavin synthase subunit alphachromosome CDS1508105 642 - 0.510903
ribF SPA0046 hypothetical proteinchromosome CDS52838 939 + 0.56656
ribH SPA2306 riboflavin synthase subunit betachromosome CDS2401544 471 - 0.541401
rimK SPA1887 ribosomal protein S6 modification proteinchromosome CDS1963491 903 - 0.563677
serA SPA2933 D-3-phosphoglycerate dehydrogenasechromosome CDS3040899 1233 - 0.556367
serC SPA1821 phosphoserine aminotransferasechromosome CDS1889927 1053 - 0.54226
tbpA SPA0110 thiamine-binding periplasmic protein precursorchromosome CDS127191 984 - 0.552846
thiC SPA4001 thiamine biosynthesis protein ThiCchromosome CDS4152797 1896 - 0.584388
thiD SPA0706 phosphomethylpyrimidine kinasechromosome CDS790025 801 + 0.606742
thiE SPA4000 thiamine-phosphate pyrophosphorylasechromosome CDS4152162 636 - 0.595912
thiF SPA3999 thiamine biosynthesis protein ThiFchromosome CDS4151411 759 - 0.573123
thiG SPA3997 thiazole synthasechromosome CDS4150458 771 - 0.621271
thiH SPA3996 thiamine biosynthesis protein ThiHchromosome CDS4149328 1134 - 0.544092
thiL SPA2304 thiamine monophosphate kinasechromosome CDS2400048 978 - 0.566462
thiM SPA0705 hydroxyethylthiazole kinasechromosome CDS789241 798 + 0.609023
thiS SPA3998 sulfur carrier protein ThiSchromosome CDS4151230 201 - 0.567164
trpD SPA1153 anthranilate phosphoribosyltransferasechromosome CDS1220635 1596 - 0.572055
trpE SPA1154 anthranilate synthase component Ichromosome CDS1222230 1563 - 0.578375
ubiA SPA4051 4-hydroxybenzoate octaprenyltransferasechromosome CDS4209981 873 + 0.546392
ubiB SPA3820 NAD(P)H-flavin reductasechromosome CDS3963381 702 + 0.522792
ubiC SPA4050 chorismate lyasechromosome CDS4209470 498 + 0.540161
ubiE SPA3811 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS3955510 756 + 0.481481
ubiG SPA0588 3-demethylubiquinone-9 3-methyltransferasechromosome CDS664224 729 - 0.550069
ubiX SPA0508 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS580758 570 + 0.550877
visB SPA2925 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3036085 1179 - 0.60475
visC SPA2924 hypothetical proteinchromosome CDS3034758 1203 - 0.56941
yabJ SPA0108 hypothetical ABC transporterchromosome CDS124917 708 - 0.576271
ycdW SPA1716 putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic regionchromosome CDS1772873 939 - 0.553781
yfeK SPA0427 hypothetical proteinchromosome CDS496577 378 - 0.494709
ygdL SPA2852 hypothetical proteinchromosome CDS2956473 807 - 0.556382
ygfA SPA2931 hypothetical proteinchromosome CDS3039970 549 + 0.57377
yggW SPA2967 coproporphyrinogen III oxidasechromosome CDS3072473 1137 + 0.547933
yhhU SPA3434 hypothetical proteinchromosome CDS3541499 579 + 0.585492
yiaE SPA3498 2-hydroxyacid dehydrogenasechromosome CDS3621302 975 + 0.566154
yieE SPA3690 hypothetical proteinchromosome CDS3833984 756 + 0.531746
yigC SPA3819 hypothetical proteinchromosome CDS3961817 1479 + 0.537525
yleB SPA2069 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS2152882 1176 - 0.60119
yojL SPA0598 thiamine biosynthesis proteinchromosome CDS679940 1053 + 0.567901
ytgA SPA4273 hypothetical proteinchromosome CDS4444464 489 - 0.384458
 
Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA t2895 hypothetical proteinchromosome CDS2980276 807 - 0.556382
NA t1785 putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic regionchromosome CDS1844904 939 - 0.549521
NA t0709 hydroxyethylthiazole kinasechromosome CDS796508 798 + 0.609023
NA t2444 thiamine monophosphate kinasechromosome CDS2515890 978 - 0.564417
NA t0680 salicylate hydroxylasechromosome CDS765390 1194 + 0.592127
NA t2979 hypothetical proteinchromosome CDS3070370 549 + 0.579235
NA t2116 ABC transporter ATP-binding proteinchromosome CDS2180221 777 - 0.563707
NA t2850 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2927670 363 + 0.523416
NA t0419 hypothetical proteinchromosome CDS492928 378 - 0.492063
NA t3016 coproporphyrinogen III oxidasechromosome CDS3104293 1137 + 0.547054
NA t0168 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS194590 984 + 0.551829
NA t3385 putative membrane transport proteinchromosome CDS3487624 732 - 0.505464
NA t3939 hypothetical proteinchromosome CDS4079396 579 - 0.587219
NA t0452 putative decarboxylasechromosome CDS522062 1653 + 0.592256
NA t2974 hypothetical proteinchromosome CDS3065154 1203 - 0.570241
NA t0284 2-dehydropantoate 2-reductasechromosome CDS321370 918 + 0.489107
NA t2822 possible decarboxylasechromosome CDS2898623 594 + 0.579125
NA t2823 hypothetical proteinchromosome CDS2899216 1428 + 0.551821
apbA t2430 2-dehydropantoate 2-reductasechromosome CDS2501201 912 + 0.527412
asrB t0307 anaerobic sulfite reductase subunit Bchromosome CDS352429 819 - 0.553114
bioA t2094 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS2156398 1290 + 0.581395
bioB t2093 biotin synthetasechromosome CDS2155271 1041 - 0.550432
bioD t2090 dithiobiotin synthetasechromosome CDS2152699 687 - 0.590975
bioD t1410 dithiobiotin synthetasechromosome CDS1454879 696 + 0.518678
bioF t2092 8-amino-7-oxononanoate synthasechromosome CDS2154117 1158 - 0.603627
birA t3488 biotin--protein ligasechromosome CDS3578209 963 - 0.496366
btuB t3495 vitamin B12 receptor proteinchromosome CDS3586907 1845 - 0.517073
btuC t1221 vtamin B12-transporter permeasechromosome CDS1288014 981 + 0.594292
btuD t1223 vitamin B12-transporter ATPasechromosome CDS1289637 750 + 0.569333
btuR t1631 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS1690602 591 + 0.538071
cbiA t0840 cobyrinic acid a,c-diamide synthasechromosome CDS933507 1425 + 0.557895
cbiD t0842 cobalt-precorrin-6A synthasechromosome CDS936377 1140 + 0.557018
cbiE t0843 precorrin-6B methylasechromosome CDS937510 606 + 0.580858
cbiF t0845 precorrin-4 C11-methyltransferasechromosome CDS938667 774 + 0.573643
cbiG t0846 cobalamin biosynthesis protein CbiGchromosome CDS939421 1056 + 0.553977
cbiH t0847 precorrin-3B C17-methyltransferasechromosome CDS940476 726 + 0.566116
cbiL t0850 precorrin-2 methyltransferasechromosome CDS942781 714 + 0.578431
cbiP t0855 cobyric acid synthasechromosome CDS945995 1521 + 0.558843
cbiT t0844 precorrin-8w decarboxylasechromosome CDS938105 579 + 0.561313
citG t2248 CitG proteinchromosome CDS2312898 897 + 0.604236
citG t0065 CitG proteinchromosome CDS72925 909 + 0.547855
citX t2247 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyasechromosome CDS2312507 420 + 0.628571
citX t0064 citx proteinchromosome CDS72396 552 + 0.559783
coaA t3487 pantothenate kinasechromosome CDS3577224 951 + 0.457413
coaD t3793 phosphopantetheine adenylyltransferasechromosome CDS3912693 480 - 0.53125
coaE t0146 dephospho-CoA kinasechromosome CDS166345 621 - 0.542673
cobD t0839 cobalamin biosynthesis proteinchromosome CDS934928 960 + 0.595833
cobS t0857 cobalamin synthasechromosome CDS948054 744 + 0.568548
cobT t0858 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS948824 1071 + 0.591036
cobU t0856 adenosylcobinamide kinasechromosome CDS947512 546 + 0.549451
cysD t2836 sulfate adenylyltransferase subunit 2chromosome CDS2909821 909 - 0.525853
cysG t4028 siroheme synthasechromosome CDS4185438 1374 - 0.574964
cysH t2847 phosphoadenosine phosphosulfate reductasechromosome CDS2922913 735 - 0.559184
dfp t3788 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS3909055 1224 - 0.54902
dxs t2441 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS2512400 1863 + 0.551261
entC t2273 isochorismate synthasechromosome CDS2339553 1170 - 0.588889
fepC t2278 ferric enterobactin transport ATP-binding protein FepCchromosome CDS2345403 795 + 0.567296
fhuC t0200 ferrichrome transport ATP-binding protein FhuCchromosome CDS230378 798 + 0.590226
fimY t2313 fimbriae Y proteinchromosome CDS2376929 723 + 0.46473
folA t0090 dihydrofolate reductase type Ichromosome CDS100644 480 + 0.535417
folB t3126 dihydroneopterin aldolasechromosome CDS3214482 363 - 0.495868
folC t0499 folylpolyglutamate synthasechromosome CDS571070 1269 + 0.583136
folD t2321 methenyltetrahydrofolate cyclohydrolasechromosome CDS2385571 867 + 0.547866
folE t0662 GTP cyclohydrolase Ichromosome CDS747245 669 + 0.521674
folK t0191 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS217797 480 - 0.579167
folP t3212 dihydropteroate synthasechromosome CDS3303755 849 - 0.534747
gshA t2715 glutamate--cysteine ligasechromosome CDS2805687 1557 - 0.518304
gshB t3007 glutathione synthetasechromosome CDS3098120 948 + 0.541139
hemA t1099 glutamyl-tRNA reductasechromosome CDS1183820 1257 + 0.570406
hemB t2492 delta-aminolevulinic acid dehydratasechromosome CDS2564886 975 + 0.551795
hemC t3359 porphobilinogen deaminasechromosome CDS3460640 942 + 0.584926
hemD t3360 uroporphyrinogen-III synthetasechromosome CDS3461578 741 + 0.568151
hemE t3464 uroporphyrinogen decarboxylasechromosome CDS3552984 1065 - 0.580282
hemF t0407 coproporphyrinogen III oxidasechromosome CDS482393 900 - 0.564444
hemG t3311 protoporphyrinogen oxidasechromosome CDS3409480 546 - 0.501832
hemH t2371 ferrochelatasechromosome CDS2440199 963 - 0.56594
hemL t0203 glutamate-1-semialdehyde aminotransferasechromosome CDS234210 1281 - 0.589383
hemN t3617 coproporphyrinogen III oxidasechromosome CDS3718445 1374 - 0.518923
hemX t3361 uroporphyrinogen III methylasechromosome CDS3462340 1170 + 0.555556
hemY t3362 porphyrin biosynthetic proteinchromosome CDS3463509 1200 + 0.578333
ilvB t3722 acetolactate synthase large subunitchromosome CDS3836613 1689 + 0.560687
ilvC t3389 ketol-acid reductoisomerasechromosome CDS3490391 1476 - 0.558266
ilvE t3395 branched-chain amino acid aminotransferasechromosome CDS3497411 930 - 0.547312
ilvG t3397 acetolactate synthase II large subunitchromosome CDS3498618 1647 - 0.559806
ilvI t0120 acetolactate synthase III large subunitchromosome CDS137241 1725 + 0.545507
ispA t2440 geranyltranstransferasechromosome CDS2511477 900 + 0.573333
ispB t3222 octaprenyl-diphosphate synthasechromosome CDS3313366 972 + 0.533951
kbl t3810 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS3929522 1197 + 0.559733
ldhA t1550 D-lactate dehydrogenasechromosome CDS1607545 990 + 0.510101
lipA t2234 lipoyl synthasechromosome CDS2300481 966 + 0.547619
lipB t2232 lipoyltransferasechromosome CDS2298445 576 + 0.494792
lplA t4615 lipoate-protein ligase Achromosome CDS4766131 1017 - 0.571288
menA t3528 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS3632011 930 + 0.551613
menB t0556 naphthoate synthasechromosome CDS632265 858 + 0.566434
menC t0557 O-succinylbenzoate synthasechromosome CDS633122 963 + 0.603323
menD t0554 2-oxoglutarate decarboxylasechromosome CDS629825 1671 + 0.59605
menF t0553 menaquinone-specific isochorismate synthasechromosome CDS628444 1296 + 0.568673
menG t3529 ribonuclease activity regulator protein RraAchromosome CDS3633033 486 + 0.547325
metK t3002 S-adenosylmethionine synthetasechromosome CDS3092872 1155 + 0.541991
moaA t2085 molybdenum cofactor biosynthesis protein Achromosome CDS2144884 990 - 0.537374
moaB t2084 molybdenum cofactor biosynthesis protein Bchromosome CDS2144350 513 - 0.557505
moaC t2083 molybdenum cofactor biosynthesis protein Cchromosome CDS2143862 486 - 0.541152
moaD t2082 molybdopterin converting factor, subunit 1chromosome CDS2143624 252 - 0.575397
moaE t2081 molybdopterin converting factor, subunit 2chromosome CDS2143170 453 - 0.611479
mobA t3626 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS3728210 585 + 0.547009
mobB t3627 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3728791 516 + 0.503876
moeA t2043 molybdopterin biosynthesis MoeA proteinchromosome CDS2101792 1242 + 0.574879
moeB t2044 molybdopterin biosynthesis protein MoeBchromosome CDS2103033 750 + 0.573333
mogA t0008 molybdenum cofactor biosynthesis proteinchromosome CDS8729 591 + 0.560068
nadA t2122 quinolinate synthetasechromosome CDS2185777 1044 - 0.543103
nadB t0269 L-aspartate oxidasechromosome CDS307196 1623 - 0.552064
nadC t0151 nicotinate-nucleotide pyrophosphorylasechromosome CDS171511 894 - 0.577181
nadD t2222 nicotinic acid mononucleotide adenyltransferasechromosome CDS2288835 642 + 0.542056
nadE t1189 NAD(+) synthetasechromosome CDS1257996 828 - 0.530193
nadR t4619 nicotinamide-nucleotide adenylyltransferasechromosome CDS4770527 1233 + 0.509327
pabA t4036 para-aminobenzoate synthase component IIchromosome CDS4193927 564 + 0.554965
pabB t1053 para-aminobenzoate synthase component Ichromosome CDS1136998 1365 - 0.551648
pabC t1722 4-amino-4-deoxychorismate lyasechromosome CDS1788904 810 - 0.514815
panB t0183 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS209351 795 - 0.586164
panC t0182 pantoate--beta-alanine ligasechromosome CDS208371 855 - 0.547368
panD t0181 aspartate 1-decarboxylase precursorchromosome CDS207896 381 - 0.545932
panF t3297 sodium/panthothenate symporterchromosome CDS3391363 1452 + 0.548898
pdxA t0094 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS103276 990 - 0.587879
pdxB t0494 erythronate-4-phosphate dehydrogenasechromosome CDS566201 1137 + 0.568162
pdxH t1316 pyridoxamine 5'-phosphate oxidasechromosome CDS1377110 657 + 0.543379
pdxJ t0279 pyridoxal phosphate biosynthetic proteinchromosome CDS317589 732 + 0.576503
pdxK t0423 pyridoxine kinasechromosome CDS495473 867 + 0.567474
pdxY t1318 pyridoxine kinasechromosome CDS1379227 687 + 0.544396
pilO t4243 putative pilus assembly proteinchromosome CDS4411887 1296 + 0.565586
pncB t1930 nicotinate phosphoribosyltransferasechromosome CDS1972525 1203 + 0.541147
pnuC t2121 pnuC proteinchromosome CDS2185033 720 - 0.5
poxB t1998 pyruvate dehydrogenasechromosome CDS2057552 1719 + 0.570681
rfbI t0779 CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS870827 975 + 0.408205
ribA t1624 GTP cyclohydrolase II proteinchromosome CDS1679584 591 + 0.502538
ribB t3115 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3200849 654 - 0.559633
ribD t2447 riboflavin biosynthesis protein RibDchromosome CDS2517945 1104 - 0.599638
ribE t1294 riboflavin synthase subunit alphachromosome CDS1357958 642 + 0.514019
ribF t0047 hypothetical proteinchromosome CDS52869 939 + 0.565495
ribH t2446 riboflavin synthase subunit betachromosome CDS2517386 471 - 0.541401
rimK t2021 ribosomal protein S6 modification proteinchromosome CDS2079201 903 - 0.563677
serA t2980 D-3-phosphoglycerate dehydrogenasechromosome CDS3071299 1233 - 0.553934
serC t1957 phosphoserine aminotransferasechromosome CDS2008003 1089 - 0.534435
tbpA t0112 thiamine-binding periplasmic protein precursorchromosome CDS127093 984 - 0.551829
thiC t3467 thiamine biosynthesis protein ThiCchromosome CDS3555807 1896 + 0.58808
thiD t0710 phosphomethylpyrimidine kinasechromosome CDS797292 801 + 0.601748
thiE t3468 thiamine-phosphate pyrophosphorylasechromosome CDS3557702 636 + 0.597484
thiF t3469 thiamine biosynthesis protein ThiFchromosome CDS3558330 759 + 0.57971
thiG t3471 thiazole synthasechromosome CDS3559271 771 + 0.618677
thiH t3472 thiamine biosynthesis protein ThiHchromosome CDS3560038 1134 + 0.551146
thiS t3470 sulfur carrier protein ThiSchromosome CDS3559096 174 + 0.586207
trpD t1636 anthranilate phosphoribosyltransferasechromosome CDS1695587 1596 + 0.569549
trpE t1635 anthranilate synthase component Ichromosome CDS1694025 1563 + 0.583493
ubiA t4140 4-hydroxybenzoate octaprenyltransferasechromosome CDS4284982 873 + 0.546392
ubiB t3318 NAD(P)H-flavin reductasechromosome CDS3419298 702 - 0.524217
ubiC t4139 chorismate lyasechromosome CDS4284471 498 + 0.544177
ubiE t3327 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS3427115 756 - 0.482804
ubiG t0588 3-demethylubiquinone-9 3-methyltransferasechromosome CDS666007 729 - 0.547325
ubiX t0508 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS582541 570 + 0.552632
visB t2975 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3066485 1179 - 0.606446
yabJ t0110 hypothetical ABC transporterchromosome CDS124816 708 - 0.583333
yiaE t3873 2-hydroxyacid dehydrogenasechromosome CDS3999261 975 - 0.570256
yieE t3674 hypothetical proteinchromosome CDS3782854 756 - 0.531746
yigC t3319 hypothetical proteinchromosome CDS3420085 1479 - 0.538202
yleB t2202 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS2267097 1176 - 0.602041
yojL t0598 thiamine biosynthesis proteinchromosome CDS682434 1053 + 0.566002
 
Salmonella enterica subsp. enterica serovar Typhi str. CT18, CT18
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA HCM1.222 dihydropteroate synthasepHCM1 CDS165988 816 + 0.606618
NA STY2646 putative decarboxylasechromosome CDS2480998 1653 - 0.592256
NA STY3643 putative membrane transport proteinchromosome CDS3501966 732 - 0.505464
NA STY3127 hypothetical proteinchromosome CDS2994381 807 - 0.556382
NA STY1172 putative 2-hydroxyacid dehydrogenase in phoh-csgg intergenic regionchromosome CDS1135341 939 + 0.549521
NA STY3212 hypothetical proteinchromosome CDS3079659 1203 - 0.570241
NA STY0458 thiamine monophosphate kinasechromosome CDS464234 978 + 0.564417
NA STY4228 hypothetical proteinchromosome CDS4094749 579 - 0.587219
NA STY2819 2-dehydropantoate 2-reductasechromosome CDS2682562 918 - 0.489107
NA STY2676 hypothetical proteinchromosome CDS2511407 378 + 0.492063
NA STY3257 coproporphyrinogen III oxidasechromosome CDS3118798 1137 + 0.547054
NA STY3077 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2941776 363 + 0.523416
NA HCM2.0017c hypothetical proteinpHCM2 CDS13115 2163 - 0.518262
NA STY2405 salicylate hydroxylasechromosome CDS2237354 1194 - 0.592127
NA STY0803 ABC transporter ATP-binding proteinchromosome CDS800092 777 + 0.563707
NA STY2376 hydroxyethylthiazole kinasechromosome CDS2206631 798 - 0.609023
NA HCM2.0117c putative dihydrofolate reductasepHCM2 CDS90712 477 - 0.536688
NA STY3047 hypothetical proteinchromosome CDS2913358 1428 + 0.551821
NA STY3046 possible decarboxylasechromosome CDS2912765 594 + 0.579125
NA STY3217 hypothetical proteinchromosome CDS3084875 549 + 0.579235
NA HCM1.32c hypothetical proteinpHCM1 CDS11663 2376 - 0.564394
NA STY0185 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS194599 984 + 0.551829
apbA STY0473 2-dehydropantoate 2-reductasechromosome CDS478989 912 - 0.528509
asrB STY2795 anaerobic sulfite reductase subunit Bchromosome CDS2651602 819 + 0.553114
bioA STY0826 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS823390 1290 - 0.581395
bioB STY0827 biotin synthetasechromosome CDS824766 1041 + 0.550432
bioD STY0830 dithiobiotin synthetasechromosome CDS827692 687 + 0.590975
bioD STY1575 dithiobiotin synthetasechromosome CDS1525091 696 - 0.518678
bioF STY0828 8-amino-7-oxononanoate synthasechromosome CDS825803 1158 + 0.603627
birA STY3741 biotin--protein ligasechromosome CDS3592550 963 - 0.496366
btuB STY3744 vitamin B12 receptor proteinchromosome CDS3601247 1845 - 0.517073
btuC STY1770 vtamin B12-transporter permeasechromosome CDS1692136 981 - 0.595311
btuD STY1768 vitamin B12-transporter ATPasechromosome CDS1690744 750 - 0.569333
btuR STY1332 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS1289991 591 - 0.538071
cbiA STY2240 cobyrinic acid a,c-diamide synthasechromosome CDS2068997 1425 - 0.557193
cbiD STY2237 cobalt-precorrin-6A synthasechromosome CDS2066412 1140 - 0.557018
cbiE STY2236 precorrin-6B methylasechromosome CDS2065813 606 - 0.580858
cbiF STY2234 precorrin-4 C11-methyltransferasechromosome CDS2064488 774 - 0.573643
cbiG STY2233 cobalamin biosynthesis protein CbiGchromosome CDS2063452 1056 - 0.553977
cbiH STY2232 precorrin-3B C17-methyltransferasechromosome CDS2062727 726 - 0.566116
cbiL STY2228 precorrin-2 methyltransferasechromosome CDS2060434 714 - 0.578431
cbiP STY2222 cobyric acid synthasechromosome CDS2056413 1521 - 0.558843
cbiT STY2235 precorrin-8w decarboxylasechromosome CDS2065245 579 - 0.561313
citG STY0668 CitG proteinchromosome CDS667277 897 - 0.604236
citG2 STY0072 citg proteinchromosome CDS72925 909 + 0.547855
citX STY0669 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyasechromosome CDS668145 420 - 0.628571
citX2 STY0071 citx proteinchromosome CDS72396 552 + 0.559783
coaA STY3740 pantothenate kinasechromosome CDS3591565 951 + 0.457413
coaD STY4069 phosphopantetheine adenylyltransferasechromosome CDS3927194 480 - 0.53125
coaE STY0162 dephospho-CoA kinasechromosome CDS166354 621 - 0.542673
cobD STY2239 cobalamin biosynthesis proteinchromosome CDS2068041 960 - 0.595833
cobS STY2220 cobalamin synthasechromosome CDS2055131 744 - 0.568548
cobT STY2219 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2054034 1071 - 0.591036
cobU STY2221 adenosylcobinamide kinasechromosome CDS2055871 546 - 0.549451
cysD STY3060 sulfate adenylyltransferase subunit 2chromosome CDS2923962 909 - 0.525853
cysG STY4319 siroheme synthasechromosome CDS4200791 1374 - 0.574964
cysH STY3074 phosphoadenosine phosphosulfate reductasechromosome CDS2937019 735 - 0.559184
dfp STY4064 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS3923556 1224 - 0.54902
dhfR HCM1.165c putative dihydrofolate reductasepHCM1 CDS120417 483 - 0.459627
dxs STY0461 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS466839 1863 - 0.551261
entC STY0639 isochorismate synthasechromosome CDS640379 1170 + 0.588889
fepC STY0634 ferric enterobactin transport ATP-binding protein FepCchromosome CDS634904 795 - 0.567296
fhuC STY0219 ferrichrome transport ATP-binding protein FhuCchromosome CDS230387 798 + 0.590226
fimY STY0598 fimbriae Y proteinchromosome CDS603450 723 - 0.46473
folA STY0102 dihydrofolate reductase type Ichromosome CDS100653 480 + 0.535417
folB STY3385 dihydroneopterin aldolasechromosome CDS3228987 363 - 0.495868
folC STY2596 folylpolyglutamate synthasechromosome CDS2432374 1269 - 0.583136
folD STY0588 FolD bifunctional protein [includes: methylenetetrahydrofolate dehydrogenase; methenyltetrahydrofolate cyclohydrolasechromosome CDS594664 867 - 0.547866
folE STY2427 GTP cyclohydrolase Ichromosome CDS2256801 669 - 0.521674
folK STY0208 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS217806 480 - 0.579167
folP STY3473 dihydropteroate synthasechromosome CDS3318260 849 - 0.534747
gshA STY2944 glutamate--cysteine ligasechromosome CDS2819830 1557 - 0.518304
gshB STY3248 glutathione synthetasechromosome CDS3112625 948 + 0.541139
hemA STY1902 glutamyl-tRNA reductasechromosome CDS1796056 1257 - 0.570406
hemB STY0404 delta-aminolevulinic acid dehydratasechromosome CDS415253 975 - 0.551795
hemC STY3621 porphobilinogen deaminasechromosome CDS3474982 942 + 0.584926
hemD STY3622 uroporphyrinogen-III synthetasechromosome CDS3475920 741 + 0.569501
hemE STY3718 uroporphyrinogen decarboxylasechromosome CDS3567325 1065 - 0.580282
hemF STY2688 coproporphyrinogen III oxidasechromosome CDS2521420 900 + 0.564444
hemG STY3573 protoporphyrinogen oxidasechromosome CDS3423822 546 - 0.501832
hemH STY0533 ferrochelatasechromosome CDS539940 963 + 0.56594
hemL STY0223 glutamate-1-semialdehyde aminotransferasechromosome CDS234219 1281 - 0.589383
hemN STY3877 coproporphyrinogen III oxidasechromosome CDS3732783 1374 - 0.518923
hemX STY3623 uroporphyrinogen III methylasechromosome CDS3476682 1170 + 0.555556
hemY STY3624 Porphyrin biosynthetic proteinchromosome CDS3477851 1200 + 0.578333
ilvB STY3986 acetolactate synthase large subunitchromosome CDS3851123 1689 + 0.560687
ilvC STY3648 ketol-acid reductoisomerasechromosome CDS3504733 1476 - 0.558266
ilvE STY3654 branched-chain amino acid aminotransferasechromosome CDS3511753 930 - 0.547312
ilvG STY3656 acetolactate synthase II large subunitchromosome CDS3512960 1647 - 0.559806
ilvI STY0135 acetolactate synthase III large subunitchromosome CDS137249 1725 + 0.545507
ispA STY0462 geranyltranstransferasechromosome CDS468725 900 - 0.573333
ispB STY3484 octaprenyl-diphosphate synthasechromosome CDS3327871 972 + 0.533951
kbl STY4086 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS3944023 1197 + 0.559733
ldhA STY1422 D-lactate dehydrogenasechromosome CDS1372648 990 - 0.510101
lipA STY0683 lipoyl synthasechromosome CDS679625 966 - 0.548654
lipB STY0686 lipoyltransferasechromosome CDS682051 576 - 0.494792
lplA STY4923 lipoate-protein ligase Achromosome CDS4783207 1017 - 0.571288
menA STY3780 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS3646348 930 + 0.551613
menB STY2537 naphthoate synthasechromosome CDS2371590 858 - 0.566434
menC STY2536 O-succinylbenzoate synthasechromosome CDS2370628 963 - 0.603323
menD STY2540 2-oxoglutarate decarboxylasechromosome CDS2373217 1671 - 0.59605
menF STY2541 menaquinone-specific isochorismate synthasechromosome CDS2374973 1296 - 0.568673
menG STY3781 ribonuclease activity regulator protein RraAchromosome CDS3647370 486 + 0.547325
metK STY3243 S-adenosylmethionine synthetasechromosome CDS3107377 1155 + 0.541991
moaA STY0836 molybdenum cofactor biosynthesis protein Achromosome CDS835204 990 + 0.537374
moaB STY0837 molybdenum cofactor biosynthesis protein Bchromosome CDS836215 513 + 0.557505
moaC STY0838 molybdenum cofactor biosynthesis protein Cchromosome CDS836730 486 + 0.541152
moaD STY0839 molybdopterin converting factor, subunit 1chromosome CDS837202 252 + 0.575397
moaE STY0840 molybdopterin converting factor, subunit 2chromosome CDS837455 453 + 0.611479
mobA STY3886 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS3742558 585 + 0.547009
mobB STY3887 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3743139 516 + 0.503876
moeA STY0885 molybdopterin biosynthesis MoeA proteinchromosome CDS878044 1242 - 0.574879
moeB STY0884 molybdopterin biosynthesis protein MoeBchromosome CDS877295 750 - 0.573333
mogA STY0008 molybdenum cofactor biosynthesis proteinchromosome CDS8729 591 + 0.560068
nadA STY0797 quinolinate synthetasechromosome CDS794269 1044 + 0.543103
nadB STY2834 L-aspartate oxidasechromosome CDS2696031 1623 + 0.552064
nadC STY0167 nicotinate-nucleotide pyrophosphorylasechromosome CDS171520 894 - 0.577181
nadD STY0696 nicotinic acid mononucleotide adenyltransferasechromosome CDS691595 642 - 0.542056
nadE STY1803 NAD(+) synthetasechromosome CDS1722307 828 + 0.530193
nadR STY4927 nicotinamide-nucleotide adenylyltransferasechromosome CDS4787603 1233 + 0.509327
pabA STY4327 para-aminobenzoate synthase component IIchromosome CDS4209280 564 + 0.554965
pabB STY1954 para-aminobenzoate synthase component Ichromosome CDS1842770 1365 + 0.551648
pabC STY1237 4-amino-4-deoxychorismate lyasechromosome CDS1191470 810 + 0.514815
panB STY0200 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS209360 795 - 0.586164
panC STY0199 pantoate--beta-alanine ligasechromosome CDS208380 855 - 0.547368
panD STY0198 aspartate 1-decarboxylase precursorchromosome CDS207905 381 - 0.545932
panF STY3562 sodium/panthothenate symporterchromosome CDS3405869 1452 + 0.548898
pdxA STY0106 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS103285 990 - 0.587879
pdxB STY2601 erythronate-4-phosphate dehydrogenasechromosome CDS2437375 1137 - 0.567282
pdxH STY1674 pyridoxamine 5'-phosphate oxidasechromosome CDS1603370 657 - 0.543379
pdxJ STY2824 pyridoxal phosphate biosynthetic proteinchromosome CDS2686529 732 - 0.576503
pdxK STY2672 pyridoxine kinasechromosome CDS2508373 867 - 0.567474
pdxY STY1672 pyridoxine kinasechromosome CDS1601223 687 - 0.545852
pilO STY4543 putative pilus assembly proteinchromosome CDS4427237 1296 + 0.565586
pncB STY1010 nicotinate phosphoribosyltransferasechromosome CDS1007350 1203 - 0.541147
pnuC STY0798 pnuC proteinchromosome CDS795337 720 + 0.5
poxB STY0931 pyruvate dehydrogenasechromosome CDS921807 1719 - 0.570681
rfbI STY2303 CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS2132127 975 - 0.408205
ribA STY1340 GTP cyclohydrolase II proteinchromosome CDS1301009 591 - 0.502538
ribB STY3373 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3215354 654 - 0.559633
ribD STY0455 riboflavin biosynthesis protein RibDchromosome CDS462053 1104 + 0.599638
ribE STY1696 riboflavin synthase subunit alphachromosome CDS1622537 642 - 0.514019
ribF STY0054 hypothetical proteinchromosome CDS52869 939 + 0.565495
ribH STY0456 riboflavin synthase subunit betachromosome CDS463245 471 + 0.541401
rimK STY0908 ribosomal protein S6 modification proteinchromosome CDS900974 903 + 0.563677
serA STY3218 D-3-phosphoglycerate dehydrogenasechromosome CDS3085804 1233 - 0.553934
serC STY0977 phosphoserine aminotransferasechromosome CDS971986 1089 + 0.534435
tbpA STY0125 thiamine-binding periplasmic protein precursorchromosome CDS127102 984 - 0.551829
thiC STY3721 thiamine biosynthesis protein ThiCchromosome CDS3570148 1896 + 0.58808
thiD STY2375 phosphomethylpyrimidine kinasechromosome CDS2205844 801 - 0.601748
thiE STY3722 thiamine-phosphate pyrophosphorylasechromosome CDS3572043 636 + 0.597484
thiF STY3723 thiamine biosynthesis protein ThiFchromosome CDS3572671 759 + 0.57971
thiG STY3725 thiazole synthasechromosome CDS3573612 771 + 0.618677
thiH STY3726 thiamine biosynthesis protein ThiHchromosome CDS3574379 1134 + 0.551146
thiS STY3724 sulfur carrier protein ThiSchromosome CDS3573437 174 + 0.586207
trpD STY1327 anthranilate phosphoribosyltransferasechromosome CDS1284001 1596 - 0.569549
trpE STY1328 anthranilate synthase component Ichromosome CDS1285596 1563 - 0.583493
ubiA STY4430 4-hydroxybenzoate octaprenyltransferasechromosome CDS4300332 873 + 0.546392
ubiB STY3580 NAD(P)H-flavin reductasechromosome CDS3433640 702 - 0.524217
ubiC STY4429 chorismate lyasechromosome CDS4299821 498 + 0.544177
ubiE STY3589 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS3441457 756 - 0.481481
ubiG STY2505 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2337977 729 + 0.547325
ubiX STY2586 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2421602 570 - 0.552632
visB STY3213 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3080990 1179 - 0.606446
yabJ STY0123 hypothetical ABC transporterchromosome CDS124825 708 - 0.583333
yiaE STY4156 2-hydroxyacid dehydrogenasechromosome CDS4014615 975 - 0.570256
yieE STY3934 hypothetical proteinchromosome CDS3797363 756 - 0.531746
yigC STY3581 hypothetical proteinchromosome CDS3434427 1479 - 0.538878
yleB STY0717 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS712799 1176 + 0.602041
yojL STY2492 thiamine biosynthesis proteinchromosome CDS2321227 1053 - 0.566002
 
Shigella boydii Sb227, Sb227
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SBO_4250 hypothetical proteinchromosome CDS4305828 558 + 0.430108
NA SBO_3736 hypothetical proteinchromosome CDS3752653 543 - 0.510129
NA SBO_1543 hypothetical proteinchromosome CDS1524949 708 + 0.519774
NA SBO_1465 hypothetical proteinchromosome CDS1442068 306 - 0.447712
NA SBO_2700 putative phosphoglycerate dehydrogenasechromosome CDS2704227 948 - 0.436709
NA SBO_2399 putative enzymechromosome CDS2392188 1695 - 0.464307
apbA SBO_0319 ApbAchromosome CDS332450 912 - 0.517544
bioA SBO_0661 7,8-diaminopelargonic acid synthetasechromosome CDS673990 1290 - 0.560465
bioB SBO_0662 biotin synthesischromosome CDS675366 1041 + 0.552354
bioD SBO_0665 dethiobiotin synthetasechromosome CDS678292 678 + 0.535398
bioF SBO_0663 8-amino-7-oxononanoate synthasechromosome CDS676403 1155 + 0.584416
birA SBO_3993 biotin-[acetylCoA carboxylase] holoenzyme synthetasechromosome CDS4031504 966 + 0.496894
btuC SBO_1417 vitamin B12 transport permease proteinchromosome CDS1393139 981 + 0.547401
btuD SBO_1419 ATP-binding component of vitamin B12 transport systemchromosome CDS1394733 750 + 0.548
btuR SBO_1796 cob(I)alamin adenolsyltransferasechromosome CDS1775398 540 + 0.511111
citG SBO_0478 hypothetical proteinchromosome CDS497102 849 - 0.558304
coaA SBO_3994 pantothenate kinasechromosome CDS4032498 951 - 0.443743
cobS SBO_1211 cobalamin 5'-phosphate synthasechromosome CDS1209534 744 + 0.530914
cobT SBO_1212 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS1210343 1026 + 0.526316
cysD SBO_2768 ATP:sulfurylase, subunit 2chromosome CDS2776950 909 + 0.531353
cysG SBO_3350 uroporphyrinogen III methylasechromosome CDS3336573 1374 + 0.54294
cysH SBO_2645 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS2648095 735 - 0.503401
dfp SBO_3641 Dfpchromosome CDS3658257 1293 + 0.529002
dxs SBO_0314 1-deoxyxylulose-5-phosphate synthasechromosome CDS327161 1863 - 0.541063
entC SBO_0454 isochorismate hydroxymutase 2, enterochelin biosynthesischromosome CDS473362 1176 + 0.561224
fepC SBO_0449 ATP-binding component of ferric enterobactin transportchromosome CDS467861 816 - 0.535539
fhuC SBO_0140 ATP-binding component of hydroxymate-dependent iron transporterchromosome CDS155931 798 + 0.565163
folA SBO_0037 dihydrofolate reductase type Ichromosome CDS38885 480 + 0.533333
folC SBO_2352 dihydrofolate:folylpolyglutamate synthetasechromosome CDS2340569 1269 - 0.55792
folD SBO_0414 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS430772 867 + 0.542099
folE SBO_2174 GTP cyclohydrolase Ichromosome CDS2151795 669 + 0.505232
folK SBO_0131 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinasechromosome CDS143472 480 - 0.514583
folP SBO_3205 7,8-dihydropteroate synthasechromosome CDS3210035 894 + 0.514541
folX SBO_2338 D-erythro-7,8-dihydroneopterin tri P epimerasechromosome CDS2329443 363 + 0.443526
gshA SBO_2829 gamma-glutamate-cysteine ligasechromosome CDS2835296 1557 + 0.509955
gshB SBO_3043 glutathione synthetasechromosome CDS3040705 951 - 0.537329
hemA SBO_1857 HemAchromosome CDS1837689 1257 - 0.539379
hemB SBO_0263 5-aminolevulinate dehydratasechromosome CDS277044 1008 - 0.539683
hemC SBO_3816 porphobilinogen deaminasechromosome CDS3837784 963 - 0.555556
hemD SBO_3815 uroporphyrinogen III synthasechromosome CDS3837047 741 - 0.535762
hemE SBO_4018 uroporphyrinogen decarboxylasechromosome CDS4056140 1065 + 0.557746
hemF SBO_2461 coproporphyrinogen III oxidasechromosome CDS2451538 900 + 0.546667
hemG SBO_3862 protoporphyrin oxidasechromosome CDS3887883 546 + 0.509158
hemH SBO_0375 ferrochelatasechromosome CDS391201 963 + 0.539979
hemL SBO_0143 glutamate-1-semialdehyde aminotransferasechromosome CDS159632 1281 - 0.558938
hemN SBO_3879 O2-independent coproporphyrinogen III oxidasechromosome CDS3906399 1380 + 0.532609
hemX SBO_3814 uroporphyrinogen III methylasechromosome CDS3835802 1224 - 0.538399
hemY SBO_3813 HemYchromosome CDS3834603 1197 - 0.546366
ilvB SBO_3698 acetolactate synthase I valine-sensitive large subunitchromosome CDS3713277 1689 + 0.563647
ilvC SBO_3785 ketol-acid reductoisomerasechromosome CDS3806121 1476 + 0.547425
ilvE SBO_3781 branched-chain amino-acid aminotransferasechromosome CDS3800693 930 + 0.548387
ilvG SBO_3779 Acetolactate synthase II, large subunitchromosome CDS3798767 1647 + 0.542805
ilvI SBO_0065 acetolactate synthase isozyme III large subunitchromosome CDS73633 1725 + 0.525217
ispA SBO_0315 geranyltranstransferasechromosome CDS329048 900 - 0.542222
ispB SBO_3195 octaprenyl diphosphate synthasechromosome CDS3200456 972 - 0.527778
kbl SBO_3623 2-amino-3-ketobutyrate CoA ligasechromosome CDS3640140 1197 - 0.542189
kdtB SBO_3636 putative enzyme of lipopolysaccharide synthesischromosome CDS3655423 480 + 0.527083
ldhA SBO_1686 fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS1670039 990 + 0.50404
lipA SBO_0492 lipoate synthesischromosome CDS509661 966 - 0.532091
lipB SBO_0494 protein of lipoate biosynthesischromosome CDS512047 576 - 0.473958
lplA SBO_4449 lipoate-protein ligase Achromosome CDS4501326 1017 - 0.579154
menA SBO_3947 MenAchromosome CDS3972999 927 - 0.539374
menB SBO_2299 dihydroxynaphtoic acid synthetasechromosome CDS2288132 858 - 0.554779
menC SBO_2298 o-succinylbenzoyl-CoA synthasechromosome CDS2287170 963 - 0.589823
menD SBO_2301 2-oxoglutarate decarboxylasechromosome CDS2289759 1671 - 0.582286
menF SBO_2302 isochorismate hydroxymutase 2chromosome CDS2291518 1071 - 0.537815
menG SBO_3946 MenGchromosome CDS3972421 486 - 0.516461
metK SBO_3048 methionine adenosyltransferase 1chromosome CDS3045685 1155 - 0.531602
moaA SBO_0668 molybdopterin biosynthesis, protein Achromosome CDS683066 990 + 0.541414
moaB SBO_0669 molybdopterin biosynthesis, protein Bchromosome CDS684077 513 + 0.520468
moaC SBO_0670 molybdopterin biosynthesis, protein Cchromosome CDS684592 486 + 0.559671
moaD SBO_0671 molybdopterin biosynthesischromosome CDS685070 246 + 0.556911
moaE SBO_0672 molybdopterin converting factor, subunit 2chromosome CDS685317 453 + 0.565121
mobA SBO_3869 MobAchromosome CDS3894521 585 - 0.504274
mobB SBO_3868 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3894012 513 - 0.48538
moeA SBO_0717 molybdopterin biosynthesischromosome CDS734804 1236 - 0.565534
moeB SBO_0716 molybdopterin biosynthesischromosome CDS734055 750 - 0.556
mog SBO_0010 Mogchromosome CDS10081 588 + 0.535714
nadA SBO_0605 quinolinate synthetase, A proteinchromosome CDS625737 1044 + 0.501916
nadC SBO_0098 quinolinate phosphoribosyltransferasechromosome CDS106412 894 - 0.53132
nadE SBO_1350 NAD synthetasechromosome CDS1333516 828 - 0.5
nadR SBO_4453 probable nadAB transcriptional regulatorchromosome CDS4505519 1254 + 0.505582
ospB SBO_P005 OspBpSB4_227 CDS2511 867 + 0.329873
pabA SBO_3342 p-aminobenzoate synthetase, component IIchromosome CDS3329010 564 - 0.535461
pabB SBO_1272 p-aminobenzoate synthetase, component Ichromosome CDS1263868 1362 - 0.511013
pabC SBO_1967 4-amino-4-deoxychorismate lyasechromosome CDS1941224 810 - 0.506173
panB SBO_0123 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS137220 795 - 0.548428
panC SBO_0122 pantothenate synthetasechromosome CDS136357 852 - 0.530516
panD SBO_0120 aspartate 1-decarboxylasechromosome CDS134515 381 - 0.524934
panF SBO_3252 sodium/pantothenate symporterchromosome CDS3255834 1458 + 0.542524
pdxA SBO_0041 pyridoxine biosynthesischromosome CDS41489 990 - 0.564646
pdxB SBO_2357 erythronate-4-phosphate dehyrogenasechromosome CDS2345610 1137 - 0.527704
pdxH SBO_1496 pyridoxinephosphate oxidasechromosome CDS1472805 657 + 0.520548
pdxJ SBO_2592 pyridoxine biosynthesischromosome CDS2598076 732 - 0.554645
pdxY SBO_1498 pyridoxal kinase 2/pyridoxine kinasechromosome CDS1474923 864 + 0.532407
pncB SBO_2222 nicotinate phosphoribosyltransferasechromosome CDS2207322 1203 - 0.512884
pnuC SBO_0606 PnuCchromosome CDS626818 720 + 0.481944
poxB SBO_0804 pyruvate oxidasechromosome CDS812136 1719 - 0.539849
ribA SBO_1787 GTP cyclohydrolase IIchromosome CDS1763920 591 + 0.499154
ribB SBO_2899 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS2901780 654 - 0.527523
ribD SBO_0308 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesischromosome CDS322426 1104 + 0.554348
ribE SBO_1469 riboflavin synthase, alpha chainchromosome CDS1445750 642 + 0.478193
ribF SBO_0024 putative regulatorchromosome CDS21499 942 + 0.530786
ribH SBO_0309 riboflavin synthase, beta chainchromosome CDS323618 471 + 0.52017
rimK SBO_0786 ribosomal protein S6 modification proteinchromosome CDS794796 903 + 0.55814
serA SBO_3080 D-3-phosphoglycerate dehydrogenasechromosome CDS3079673 1233 + 0.523925
serC SBO_2193 3-phosphoserine aminotransferasechromosome CDS2172162 1089 + 0.503214
tbpA SBO_0055 thiamin-binding periplasmic proteinchromosome CDS62081 984 - 0.529472
thiC SBO_4015 thiamin biosynthesis, pyrimidine moietychromosome CDS4052627 1896 - 0.555907
thiD SBO_0924 phosphomethylpyrimidine kinasechromosome CDS953912 801 - 0.55181
thiE SBO_4014 thiamin biosynthesis, thiazole moietychromosome CDS4051992 636 - 0.573899
thiG SBO_4011 thiamin biosynthesis, thiazole moietychromosome CDS4050288 846 - 0.574468
thiH SBO_4010 thiamin biosynthesis, thiazole moietychromosome CDS4049158 1134 - 0.548501
thiL SBO_0311 thiamin-monophosphate kinasechromosome CDS324605 978 + 0.547035
thiM SBO_0925 hydoxyethylthiazole kinasechromosome CDS954709 789 - 0.541191
thiS SBO_4012 Sulfur transfer proteinchromosome CDS4051060 201 - 0.547264
trbH SBO_P123 hypothetical proteinpSB4_227 CDS102211 720 + 0.502778
trpD SBO_1803 anthranilate synthase component IIchromosome CDS1782317 1596 + 0.556391
trpE SBO_1802 anthranilate synthase component Ichromosome CDS1780755 1563 + 0.550224
ubiA SBO_4077 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4119771 873 - 0.512028
ubiB SBO_3856 ferrisiderophore reductasechromosome CDS3879963 702 + 0.519943
ubiC SBO_4078 chorismate lyasechromosome CDS4120656 609 - 0.502463
ubiE SBO_3847 UbiEchromosome CDS3872291 756 + 0.519841
ubiG SBO_2064 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylasechromosome CDS2039213 723 - 0.539419
ubiH SBO_3085 UbiHchromosome CDS3084957 1179 + 0.601357
ubiX SBO_2348 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2336952 570 - 0.52807
visC SBO_3086 hypothetical proteinchromosome CDS3086158 1203 + 0.546135
yabJ SBO_0053 putative ATP-binding component of a transport systemchromosome CDS59813 699 - 0.573677
yacE SBO_0091 putative DNA repair proteinchromosome CDS100493 621 - 0.52818
ybdU SBO_0479 hypothetical proteinchromosome CDS497987 489 - 0.591002
ybeN SBO_0503 hypothetical proteinchromosome CDS520342 642 - 0.498442
ycdW SBO_2035 putative dehydrogenasechromosome CDS2001861 978 - 0.509202
ydaH SBO_1725 putative pump protein (transport)chromosome CDS1707900 1437 + 0.493389
ygcM SBO_2649 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2653983 366 + 0.486339
ygdL SBO_2695 putative enzymechromosome CDS2701664 807 - 0.550186
ygfA SBO_3081 putative ligasechromosome CDS3081686 549 - 0.517304
yggC SBO_3060 putative kinasechromosome CDS3058855 714 + 0.535014
yggW SBO_3035 putative oxidasechromosome CDS3035138 1137 - 0.528584
ygiG SBO_2914 putative kinasechromosome CDS2918844 372 - 0.508065
yhhU SBO_3472 hypothetical proteinchromosome CDS3462346 588 + 0.569728
yiaE SBO_3555 putative dehydrogenasechromosome CDS3564172 987 + 0.522796
yieE SBO_3663 hypothetical proteinchromosome CDS3678527 762 - 0.520997
yigC SBO_3855 putative oxidoreductasechromosome CDS3878424 1494 + 0.538153
yleB SBO_0526 hypothetical proteinchromosome CDS545982 1176 + 0.563776
yojL SBO_2093 hypothetical proteinchromosome CDS2074086 1056 + 0.534091
 
Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SDY_1240 putative iron compound ABC transporter, ATP-binding proteinchromosome CDS1146102 759 - 0.537549
NA SDY_2937 hypothetical proteinchromosome CDS2716981 1245 - 0.575904
NA SDY_2571 putative enzymechromosome CDS2367486 1695 - 0.467847
NA SDY_2938 phenylacrylic acid decarboxylase-like proteinchromosome CDS2718407 594 - 0.574074
NA SDY_1563 hypothetical proteinchromosome CDS1430437 708 + 0.516949
apbA SDY_0305 ApbAchromosome CDS297219 912 + 0.509868
bioA SDY_0832 7,8-diaminopelargonic acid synthetasechromosome CDS776492 1290 + 0.565891
bioB SDY_0831 biotin synthesischromosome CDS775364 1041 - 0.54755
bioD SDY_0828 dethiobiotin synthetasechromosome CDS772801 678 - 0.541298
bioF SDY_0830 8-amino-7-oxononanoate synthasechromosome CDS774213 1155 - 0.581818
birA SDY_3755 biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressorchromosome CDS3484621 966 - 0.494824
btuB SDY_3762 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS3492923 1845 - 0.498645
btuC SDY_1806 vitamin B12 transport permease proteinchromosome CDS1643240 981 - 0.547401
btuD SDY_1804 ATP-binding component of vitamin B12 transport systemchromosome CDS1641877 750 - 0.553333
btuR SDY_1340 cob(I)alamin adenolsyltransferasechromosome CDS1238316 591 - 0.51269
coaA SDY_3754 pantothenate kinasechromosome CDS3483642 951 + 0.44164
cobS SDY_2241 cobalamin 5'-phosphate synthasechromosome CDS2042314 744 + 0.526882
cobT SDY_2242 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS2043069 1080 + 0.519444
cobU SDY_2240 cobinamide kinase/cobinamide phosphate guanylyltransferasechromosome CDS2041772 546 + 0.510989
cysD SDY_2951 ATP-sulfurylase, subunit 2chromosome CDS2728536 909 - 0.532453
cysG SDY_3530 uroporphyrinogen III methylasechromosome CDS3264870 1374 + 0.538574
cysH SDY_2964 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS2737233 735 - 0.510204
dfp SDY_4069 Dfpchromosome CDS3804928 1293 + 0.526682
dxs SDY_0310 1-deoxyxylulose-5-phosphate synthasechromosome CDS301557 1863 + 0.536769
entC SDY_0524 isochorismate hydroxymutase 2chromosome CDS510093 1176 + 0.562075
fecE SDY_4293 ATP-binding component of citrate-dependent iron(III) transport proteinchromosome CDS4022300 768 - 0.540365
fepC SDY_0519 ATP-binding component of ferric enterobactin transportchromosome CDS504692 816 - 0.544118
fhuC SDY_0167 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS170107 798 + 0.567669
folA SDY_0071 dihydrofolate reductase type Ichromosome CDS68384 480 + 0.527083
folC SDY_2514 dihydrofolate:folylpolyglutamate synthetasechromosome CDS2312361 1269 - 0.55792
folD SDY_0281 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS274853 867 - 0.543253
folE SDY_2127 GTP cyclohydrolase Ichromosome CDS1928844 669 + 0.508221
folK SDY_0158 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinasechromosome CDS157582 480 - 0.489583
folP SDY_3358 7,8-dihydropteroate synthasechromosome CDS3115468 894 - 0.510067
folX SDY_2500 D-erythro-7,8-dihydroneopterin tri P epimerasechromosome CDS2301075 363 + 0.449036
gshA SDY_2885 gamma-glutamate-cysteine ligasechromosome CDS2668931 1557 - 0.518947
gshB SDY_3125 glutathione synthetasechromosome CDS2896845 951 - 0.53102
hemA SDY_1259 5-aminolevulinate synthesis enzyme, alternate pathwaychromosome CDS1165805 1257 + 0.540175
hemB SDY_0501 5-aminolevulinate dehydratasechromosome CDS485847 1008 + 0.536706
hemC SDY_3941 porphobilinogen deaminasechromosome CDS3671675 963 + 0.557632
hemD SDY_3942 uroporphyrinogen III synthasechromosome CDS3672634 741 + 0.533063
hemE SDY_3729 uroporphyrinogen decarboxylasechromosome CDS3459124 1065 - 0.557746
hemF SDY_2634 coproporphyrinogen III oxidasechromosome CDS2426317 900 + 0.548889
hemG SDY_3895 protoporphyrin oxidasechromosome CDS3625309 546 - 0.521978
hemH SDY_0444 ferrochelatasechromosome CDS434602 963 - 0.537902
hemL SDY_0170 glutamate-1-semialdehyde aminotransferasechromosome CDS173808 1281 - 0.554254
hemN SDY_3876 O2-independent coproporphyrinogen III oxidasechromosome CDS3605680 1380 - 0.52971
hemX SDY_3943 uroporphyrinogen III methylasechromosome CDS3673396 1182 + 0.532995
hemY SDY_3944 a late step of protoheme IX synthesischromosome CDS3674580 1197 + 0.548872
ilvB SDY_4155 acetolactate synthase I,valine-sensitive, large subunitchromosome CDS3888897 1689 - 0.560095
ilvC SDY_3974 ketol-acid reductoisomerasechromosome CDS3705002 1476 - 0.536585
ilvE SDY_3978 branched-chain amino-acid aminotransferasechromosome CDS3710976 930 - 0.545161
ilvG SDY_3980 Acetolactate synthase II, large subunitchromosome CDS3712185 1647 - 0.544627
ilvI SDY_0107 acetolactate synthase isozyme III large subunitchromosome CDS106283 1725 + 0.525797
ispA SDY_0309 geranyltranstransferasechromosome CDS300633 900 + 0.543333
ispB SDY_3368 octaprenyl diphosphate synthasechromosome CDS3124968 972 + 0.526749
kbl SDY_4050 2-amino-3-ketobutyrate CoA ligasechromosome CDS3787125 1197 - 0.539683
kdtB SDY_4064 putative enzyme of LPS biosynthesischromosome CDS3802094 480 + 0.51875
ldhA SDY_1464 fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS1345935 990 - 0.49596
lipA SDY_0550 lipoate synthesischromosome CDS531917 966 - 0.535197
lipB SDY_0552 protein of lipoate biosynthesischromosome CDS534439 576 - 0.473958
lplA SDY_4647 lipoate-protein ligase Achromosome CDS4350787 1017 - 0.571288
menA SDY_3807 MenAchromosome CDS3546405 927 + 0.537217
menB SDY_2458 dihydroxynaphtoic acid synthetasechromosome CDS2258906 858 - 0.552448
menC SDY_2457 o-succinylbenzoyl-CoA synthasechromosome CDS2257944 963 - 0.595016
menD SDY_2460 2-oxoglutarate decarboxylasechromosome CDS2260533 1671 - 0.582286
menF SDY_2461 isochorismate hydroxymutase 2, menaquinone biosynthesischromosome CDS2262292 1071 - 0.533147
menG SDY_3808 menaquinone biosynthesis proteinchromosome CDS3547424 486 + 0.516461
metK SDY_3130 methionine adenosyltransferase 1chromosome CDS2901826 1155 - 0.52987
moaA SDY_0825 molybdopterin biosynthesis, protein Achromosome CDS767716 990 - 0.537374
moaB SDY_0824 molybdopterin biosynthesis, protein Bchromosome CDS767182 513 - 0.522417
moaC SDY_0823 molybdopterin biosynthesis, protein Cchromosome CDS766694 486 - 0.561728
moaD SDY_0822 molybdopterin biosynthesischromosome CDS766456 246 - 0.565041
moaE SDY_0821 molybdopterin converting factor, subunit 2chromosome CDS766002 453 - 0.565121
mobA SDY_3888 MobAchromosome CDS3618646 585 + 0.505983
mobB SDY_3889 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3619227 513 + 0.483431
modD SDY_1236 putative molybdenum transport proteinchromosome CDS1143655 855 - 0.521637
moeA SDY_0760 molybdopterin biosynthesischromosome CDS706719 1236 + 0.563916
moeB SDY_0761 molybdopterin biosynthesischromosome CDS707954 750 + 0.561333
mog SDY_0009 Mogchromosome CDS9298 588 + 0.540816
nadA SDY_0694 quinolinate synthetase, A proteinchromosome CDS653866 1044 + 0.503831
nadB SDY_2815 quinolinate synthetase, B proteinchromosome CDS2605261 1623 + 0.531731
nadC SDY_0139 quinolinate phosphoribosyltransferasechromosome CDS138284 894 - 0.538031
nadE SDY_1540 NAD synthetasechromosome CDS1409204 828 - 0.490338
nadR SDY_4651 probable nadAB transcriptional regulatorchromosome CDS4354980 1254 + 0.513557
ospB SDY_P003 OspBpSD1_197 CDS1233 684 + 0.342105
pabA SDY_3522 p-aminobenzoate synthetase, component IIchromosome CDS3257308 564 - 0.530142
pabB SDY_1718 p-aminobenzoate synthetase, component Ichromosome CDS1568692 1362 + 0.511747
pabC SDY_2054 4-amino-4-deoxychorismate lyasechromosome CDS1865882 810 - 0.504938
panB SDY_0154 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS153922 795 + 0.538365
panC SDY_0155 pantothenate synthetasechromosome CDS154728 852 + 0.538732
panD SDY_0041 aspartate 1-decarboxylasechromosome CDS37108 381 - 0.524934
panF SDY_3435 sodium/pantothenate symporterchromosome CDS3192095 1458 + 0.538409
pdxA SDY_0077 pyridoxine biosynthesischromosome CDS71549 990 - 0.563636
pdxB SDY_2519 erythronate-4-phosphate dehyrogenasechromosome CDS2317402 1137 - 0.529464
pdxH SDY_1861 pyridoxinephosphate oxidasechromosome CDS1696852 657 - 0.520548
pdxJ SDY_2805 pyridoxine biosynthesischromosome CDS2595838 732 - 0.568306
pdxK SDY_2615 pyridoxal/pyridoxine/pyridoxamine kinasechromosome CDS2409846 852 - 0.5223
pdxY SDY_1859 pyridoxal kinase 2 / pyridoxine kinasechromosome CDS1694527 864 - 0.520833
pncB SDY_2326 nicotinate phosphoribosyltransferasechromosome CDS2112305 1203 + 0.512053
pnuC SDY_0695 required for NMN transportchromosome CDS654947 720 + 0.486111
poxB SDY_2392 pyruvate oxidasechromosome CDS2195953 1719 + 0.539267
ribA SDY_1353 GTP cyclohydrolase IIchromosome CDS1251155 591 - 0.499154
ribB SDY_3226 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS2989128 654 - 0.530581
ribD SDY_0320 bifunctional pyrimidine deaminase/reductasechromosome CDS309351 1104 - 0.557065
ribE SDY_1888 riboflavin synthase, alpha chainchromosome CDS1722887 642 - 0.476636
ribF SDY_0047 putative regulatorchromosome CDS40196 942 + 0.528662
ribH SDY_0319 riboflavin synthase, beta chainchromosome CDS308792 471 - 0.515924
rimK SDY_0743 ribosomal protein S6 modification proteinchromosome CDS691731 903 - 0.559247
serA SDY_3169 D-3-phosphoglycerate dehydrogenasechromosome CDS2934988 1233 + 0.524736
serC SDY_2354 3-phosphoserine aminotransferasechromosome CDS2147238 1089 - 0.505969
tbpA SDY_0095 thiamin-binding periplasmic proteinchromosome CDS94966 984 - 0.53252
thiC SDY_3732 thiamin biosynthesis, pyrimidine moietychromosome CDS3461806 1896 + 0.558017
thiD SDY_2277 phosphomethylpyrimidine kinasechromosome CDS2071651 801 - 0.55181
thiE SDY_3733 thiamin biosynthesis, thiazole moietychromosome CDS3463701 636 + 0.581761
thiF SDY_3734 thiamin biosynthesis, thiazole moietychromosome CDS3464347 738 + 0.571816
thiG SDY_3736 thiamin biosynthesis, thiazole moietychromosome CDS3465195 846 + 0.578014
thiH SDY_3737 thiamin biosynthesis, thiazole moietychromosome CDS3466037 1134 + 0.551146
thiL SDY_0317 thiamin-monophosphate kinasechromosome CDS307298 978 - 0.5409
thiM SDY_2278 hydoxyethylthiazole kinasechromosome CDS2072448 789 - 0.544994
thiS SDY_3735 Sulfur transfer protein involved in thiamine biosynthesischromosome CDS3465068 201 + 0.542289
trpD SDY_1331 anthranilate synthase component IIchromosome CDS1231046 1596 - 0.558897
trpE SDY_1332 anthranilate synthase component Ichromosome CDS1232641 1563 - 0.541267
ubiA SDY_4534 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4242293 873 - 0.515464
ubiB SDY_3901 ferrisiderophore reductasechromosome CDS3633046 702 - 0.524217
ubiC SDY_4535 chorismate lyasechromosome CDS4243178 609 - 0.502463
ubiE SDY_3910 UbiEchromosome CDS3640663 756 - 0.521164
ubiG SDY_2424 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylasechromosome CDS2223131 723 + 0.540802
ubiH SDY_3174 UbiHchromosome CDS2939872 1179 + 0.591179
ubiX SDY_2510 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2308562 570 - 0.52807
visC SDY_3175 hypothetical proteinchromosome CDS2941073 1203 + 0.553616
yabJ SDY_0093 putative ATP-binding component of a transport systemchromosome CDS92698 699 - 0.569385
yacE SDY_0133 putative DNA repair proteinchromosome CDS133135 621 - 0.529791
ybeN SDY_0561 hypothetical proteinchromosome CDS542741 642 - 0.495327
ycdW SDY_1004 putative dehydrogenasechromosome CDS950981 978 - 0.506135
ygcM SDY_2967 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2741868 366 + 0.489071
ygdL SDY_3030 putative enzymechromosome CDS2801774 807 - 0.546468
ygfA SDY_3170 putative ligasechromosome CDS2936601 549 - 0.508197
yggC SDY_3148 putative kinasechromosome CDS2917269 714 + 0.530812
yggW SDY_3117 putative oxidasechromosome CDS2891265 1137 - 0.53562
ygiG SDY_3241 putative kinasechromosome CDS3004319 372 - 0.516129
yhhU SDY_3630 hypothetical proteinchromosome CDS3364362 588 + 0.566327
yiaE SDY_4350 putative dehydrogenasechromosome CDS4075692 987 - 0.518744
yieE SDY_4201 hypothetical proteinchromosome CDS3931392 762 - 0.520997
yigC SDY_3902 putative oxidoreductasechromosome CDS3633793 1494 - 0.538822
yleB SDY_0598 hypothetical proteinchromosome CDS568587 1176 + 0.569728
yojL SDY_0862 hypothetical proteinchromosome CDS811497 1056 + 0.53125
 
Shigella flexneri 2a str. 2457T, 2457T
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA S3225 putative class II aminotransferasechromosome CDS3110259 351 + 0.507123
NA S1827 hypothetical proteinchromosome CDS1765979 306 + 0.447712
NA S2577 hypothetical proteinchromosome CDS2471457 1695 - 0.464897
NA S1278 putative ferric enterobactin transport ATP-binding proteinchromosome CDS1237081 759 - 0.540184
NA S2703 dihydropteroate synthasechromosome CDS2598850 816 + 0.607843
NA S3226 putative class II aminotransferasechromosome CDS3110642 789 + 0.52725
apbA S0370 2-dehydropantoate 2-reductasechromosome CDS372111 912 - 0.513158
bioA S0765 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS746952 1290 - 0.560465
bioB S0766 biotin synthesis, sulfur insertion?chromosome CDS748328 1041 + 0.554275
bioD S1746 dithiobiotin synthetasechromosome CDS1680782 696 - 0.520115
bioD S0769 dithiobiotin synthetasechromosome CDS751254 678 + 0.538348
bioF S0767 8-amino-7-oxononanoate synthasechromosome CDS749365 1155 + 0.586147
birA S3689 biotin--protein ligasechromosome CDS3579419 966 - 0.494824
btuB S3696 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS3587724 1845 - 0.500271
btuC S1637 vtamin B12-transporter permeasechromosome CDS1590231 981 + 0.552497
btuD S1639 vitamin B12-transporter ATPasechromosome CDS1591825 750 + 0.550667
btuR S1357 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS1321918 591 - 0.510998
citG S0537 hypothetical proteinchromosome CDS548368 879 - 0.550626
citX S0538 2'-(5'-triphosphoribosyl)-3'-dephospho-CoA:apo- citrate lyasechromosome CDS549283 489 - 0.595092
coaA S3688 pantothenate kinasechromosome CDS3578464 927 + 0.445523
coaE S0102 dephospho-CoA kinasechromosome CDS110588 621 - 0.523349
cobS S2170 cobalamin synthasechromosome CDS2057157 744 - 0.533602
cobT S2169 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2056066 1080 - 0.512037
cysD S2968 sulfate adenylyltransferase subunit 2chromosome CDS2842262 909 - 0.537954
cysG S4376 uroporphyrinogen III methylasechromosome CDS4304284 1374 - 0.542213
cysH S2971 phosphoadenosine phosphosulfate reductasechromosome CDS2846306 735 - 0.514286
dfp S4090 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS3990992 1293 - 0.525135
dinD S4084 DNA-damage-inducible proteinchromosome CDS3986358 825 - 0.45697
dxs S0365 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS366822 1863 - 0.538916
fepC S0508 ATP-binding component of ferric enterobactin transportchromosome CDS518740 816 - 0.53799
fhuC S0146 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS161047 798 + 0.561404
folA S0047 dihydrofolate reductase type Ichromosome CDS48627 480 + 0.529167
folC S2526 dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetasechromosome CDS2419243 1269 - 0.559496
folD S0468 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS475188 867 - 0.545559
folE S2367 GTP cyclohydrolase Ichromosome CDS2244919 669 - 0.509716
folK S0137 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinasechromosome CDS148522 480 - 0.520833
folP S3435 7,8-dihydropteroate synthasechromosome CDS3307363 894 - 0.510067
folX S2514 D-erythro-7,8-dihydroneopterin triphosphate epimerasechromosome CDS2408894 363 + 0.449036
gshA S2902 glutamate--cysteine ligasechromosome CDS2783416 1557 - 0.511882
gshB S3142 glutathione synthetasechromosome CDS3022370 951 + 0.535226
hemA S1297 glutamyl-tRNA reductasechromosome CDS1260310 1257 + 0.538584
hemB S0270 delta-aminolevulinic acid dehydratasechromosome CDS270893 1008 + 0.537698
hemC S3879 porphobilinogen deaminasechromosome CDS3774178 942 + 0.559448
hemD S3880 uroporphyrinogen-III synthetasechromosome CDS3775116 741 + 0.530364
hemE S3666 uroporphyrinogen decarboxylasechromosome CDS3555605 1065 - 0.561502
hemG S3826 protoporphyrin oxidasechromosome CDS3725208 546 - 0.514652
hemH S0427 ferrochelatasechromosome CDS434277 963 + 0.543095
hemL S0149 glutamate-1-semialdehyde aminotransferasechromosome CDS164748 1281 - 0.557377
hemN S3809 coproporphyrinogen III oxidasechromosome CDS3707113 1374 - 0.528384
hemX S3881 uroporphyrinogen III methylasechromosome CDS3775878 1200 + 0.534167
hemY S3882 HemY proteinchromosome CDS3777080 1197 + 0.543024
ilvB S3978 acetolactate synthase large subunitchromosome CDS3872959 1689 - 0.560687
ilvC S3910 ketol-acid reductoisomerasechromosome CDS3804464 1476 - 0.53523
ilvE S3914 branched-chain amino acid aminotransferasechromosome CDS3810438 930 - 0.544086
ilvG S3917 acetolactate synthase II large subunitchromosome CDS3811647 1647 - 0.545841
ilvI S0074 acetolactate synthase III large subunitchromosome CDS82873 1809 + 0.524599
ispA S0366 geranyltranstransferase (farnesyldiphosphate synthase)chromosome CDS368709 900 - 0.543333
ispB S3445 octaprenyl diphosphate synthasechromosome CDS3317009 972 + 0.526749
kbl S4110 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS4010194 1197 + 0.54386
kdtB S4095 phosphopantetheine adenylyltransferasechromosome CDS3994639 480 - 0.527083
ldhA S1459 D-lactate dehydrogenasechromosome CDS1423921 990 + 0.50202
lipA S0675 lipoyl synthasechromosome CDS686537 966 + 0.534162
lipB S0673 lipoyltransferasechromosome CDS684541 576 + 0.472222
menA S3739 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS3637791 927 + 0.533981
menB S2475 naphthoate synthasechromosome CDS2368149 858 - 0.551282
menC S2474 O-succinylbenzoate synthasechromosome CDS2367187 963 - 0.5919
menD S2477 2-oxoglutarate decarboxylasechromosome CDS2369776 1671 - 0.579294
menF S2478 menaquinone-specific isochorismate synthasechromosome CDS2371535 1071 - 0.538749
menG S3740 ribonuclease activity regulator protein RraAchromosome CDS3638810 486 + 0.522634
metK S3137 S-adenosylmethionine synthetasechromosome CDS3017185 1155 + 0.532468
moaA S0772 molybdenum cofactor biosynthesis protein Achromosome CDS756028 990 + 0.540404
moaB S0773 molybdopterin biosynthesis protein Bchromosome CDS757039 513 + 0.524366
moaC S0774 molybdenum cofactor biosynthesis protein Cchromosome CDS757554 486 + 0.561728
moaD S0775 molybdopterin biosynthesis protein Dchromosome CDS758032 246 + 0.569106
moaE S0776 molybdopterin converting factor, subunit 2chromosome CDS758279 453 + 0.578366
mobA S3819 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS3718533 585 + 0.509402
mobB S3820 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3719099 528 + 0.484848
modD S1276 molybdenum transport proteinchromosome CDS1235408 855 - 0.523977
moeA S0820 molybdopterin biosynthesis MoeA proteinchromosome CDS805450 1236 - 0.563107
moeB S0819 molybdopterin biosynthesis protein MoeBchromosome CDS804701 750 - 0.558667
mogA S0009 molybdenum cofactor biosynthesis proteinchromosome CDS9305 588 + 0.540816
nadA S0562 quinolinate synthetasechromosome CDS570938 1044 - 0.501916
nadC S0108 nicotinate-nucleotide pyrophosphorylasechromosome CDS115503 894 - 0.533557
nadD S0664 nicotinic acid mononucleotide adenyltransferasechromosome CDS676180 642 + 0.498442
nadE S1603 NAD(+) synthetasechromosome CDS1560542 828 - 0.487923
nadR S4693 nicotinamide-nucleotide adenylyltransferasechromosome CDS4585051 1254 + 0.513557
pabA S4384 para-aminobenzoate synthase component IIchromosome CDS4312665 564 + 0.537234
pabB S1531 para-aminobenzoate synthase component Ichromosome CDS1491052 1362 - 0.507342
pabC S1180 4-amino-4-deoxychorismate lyasechromosome CDS1143908 810 + 0.506173
padI S2955 phenylacrylic acid decarboxylase-like proteinchromosome CDS2832134 594 - 0.570707
panB S0133 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS146389 795 - 0.538365
panC S0132 pantoate--beta-alanine ligasechromosome CDS145526 852 - 0.5223
panD S0130 aspartate 1-decarboxylase precursorchromosome CDS143896 381 - 0.527559
panF S3513 sodium/panthothenate symporterchromosome CDS3385261 1452 + 0.541322
pdxA S0051 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS51231 990 - 0.562626
pdxB S2531 erythronate-4-phosphate dehydrogenasechromosome CDS2424284 1137 - 0.5365
pdxH S1795 pyridoxamine 5'-phosphate oxidasechromosome CDS1733707 657 - 0.515982
pdxJ S2799 pyridoxal phosphate biosynthetic proteinchromosome CDS2691657 732 - 0.553279
pdxK S2619 pyridoxine kinasechromosome CDS2511819 852 - 0.518779
pdxY S1793 pyridoxine kinasechromosome CDS1731382 864 - 0.52662
pncB S0992 nicotinate phosphoribosyltransferasechromosome CDS978345 1203 - 0.512884
pnuC S0561 PnuC proteinchromosome CDS570181 720 - 0.483333
poxB S0867 pyruvate dehydrogenasechromosome CDS853384 1719 - 0.536358
ribA S1364 GTP cyclohydrolase II proteinchromosome CDS1332721 591 - 0.499154
ribB S3286 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3165611 654 - 0.527523
ribD S0359 bifunctional pyrimidine deaminase/reductasechromosome CDS362087 1104 + 0.557065
ribE S1822 riboflavin synthase subunit alphachromosome CDS1761880 642 - 0.478193
ribF S0024 hypothetical proteinchromosome CDS20361 942 + 0.529724
ribH S0360 riboflavin synthase subunit betachromosome CDS363279 471 + 0.522293
rimK S0848 ribosomal protein S6 modification proteinchromosome CDS833540 903 + 0.555925
serA S3098 D-3-phosphoglycerate dehydrogenasechromosome CDS2983573 1233 - 0.52717
serC S0966 phosphoserine aminotransferasechromosome CDS943974 1089 + 0.504132
tbpA S0065 thiamin-binding periplasmic proteinchromosome CDS71825 984 - 0.527439
thiC S3669 thiamine biosynthesis protein ThiCchromosome CDS3558287 1896 + 0.55538
thiD S2290 phosphomethylpyrimidine kinasechromosome CDS2170763 801 - 0.55181
thiE S3670 thiamine-phosphate pyrophosphorylasechromosome CDS3560182 636 + 0.578616
thiF S3671 thiamine biosynthesis protein ThiFchromosome CDS3560810 756 + 0.56746
thiG S3672 thiazole synthasechromosome CDS3561676 846 + 0.58156
thiH S3673 thiamine biosynthesis protein ThiHchromosome CDS3562518 1134 + 0.547619
thiL S0362 thiamine monophosphate kinasechromosome CDS364266 978 + 0.543967
thiM S2291 hydroxyethylthiazole kinasechromosome CDS2171560 789 - 0.541191
trpD S1352 anthranilate phosphoribosyltransferasechromosome CDS1315976 1596 - 0.561404
trpE S1353 anthranilate synthase component Ichromosome CDS1317571 1563 - 0.539987
ubiA S3566 4-hydroxybenzoate octaprenyltransferasechromosome CDS3434864 873 + 0.510882
ubiB S3832 NAD(P)H-flavin reductasechromosome CDS3732944 702 - 0.527066
ubiC S3565 chorismate lyasechromosome CDS3434354 498 + 0.52008
ubiE S3843 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS3740562 756 - 0.519841
ubiG S2445 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2334464 723 + 0.543568
ubiH S3092 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS2978343 1179 - 0.597116
ubiX S2522 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2415626 570 - 0.531579
visC S3091 hypothetical proteinchromosome CDS2977118 1203 - 0.551122
yabJ S0063 putative ATP-binding component of a transport systemchromosome CDS69557 699 - 0.569385
yclC S2954 putative 4-hydroxybenzoate decarboxylasechromosome CDS2831184 951 - 0.56572
ygcM S2974 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2850944 363 + 0.490358
ygdL S3021 putative enzymechromosome CDS2900162 807 - 0.551425
ygfA S3097 putative ligasechromosome CDS2982244 549 + 0.520947
yggW S3150 coproporphyrinogen III oxidasechromosome CDS3027751 1137 + 0.523307
ygiG S3304 putative kinasechromosome CDS3181991 369 - 0.506775
yhhU S4270 hypothetical proteinchromosome CDS4189923 588 - 0.566327
yiaE S4182 2-hydroxyacid dehydrogenasechromosome CDS4085869 975 - 0.52
yieE S4024 hypothetical proteinchromosome CDS3917759 750 + 0.521333
yigC S3833 putative oxidoreductasechromosome CDS3733691 1494 - 0.536145
yleB S0642 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS651676 1176 - 0.560374
yojL S2428 hypothetical proteinchromosome CDS2311322 1056 - 0.534091
 
Shigella flexneri 2a str. 301, 301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SF3024 putative class II aminotransferasechromosome CDS3121596 351 + 0.507123
NA SF1695 hypothetical proteinchromosome CDS1727683 306 + 0.447712
NA SF3025 putative class II aminotransferasechromosome CDS3121979 789 + 0.52725
NA SF2918 hypothetical proteinchromosome CDS3011204 714 - 0.544818
NA SF2440 hypothetical proteinchromosome CDS2493319 1695 - 0.464897
NA SF1192 putative ferric enterobactin transport ATP-binding proteinchromosome CDS1236027 759 - 0.540184
apbA SF0362 2-dehydropantoate 2-reductasechromosome CDS372977 912 - 0.513158
bioA SF0725 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS750795 1401 - 0.549607
bioB SF0724 biotin synthesis, sulfur insertion?chromosome CDS752171 1041 + 0.554275
bioD SF0728 dithiobiotin synthetasechromosome CDS755097 678 + 0.538348
bioD SF1614 dithiobiotin synthetasechromosome CDS1641153 696 - 0.520115
bioF SF0726 8-amino-7-oxononanoate synthasechromosome CDS753208 1155 + 0.586147
birA SF4051 biotin--protein ligasechromosome CDS4192835 966 + 0.494824
btuB SF4048 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS4183651 1845 + 0.500271
btuC SF1520 vtamin B12-transporter permeasechromosome CDS1551855 981 + 0.552497
btuD SF1522 vitamin B12-transporter ATPasechromosome CDS1553449 750 + 0.550667
btuR SF1272 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS1322051 591 - 0.510998
coaA SF4052 pantothenate kinasechromosome CDS4193829 927 - 0.445523
coaE SF0100 dephospho-CoA kinasechromosome CDS111101 621 - 0.523349
cobS SF2060 cobalamin synthasechromosome CDS2081820 744 - 0.533602
cobT SF2059 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2080729 1080 - 0.512037
cobU SF2061 adenosylcobinamide kinasechromosome CDS2082560 510 - 0.492157
cysD SF2775 sulfate adenylyltransferase subunit 2chromosome CDS2847558 909 - 0.537954
cysG SF3387 uroporphyrinogen III methylasechromosome CDS3467047 1374 + 0.542213
cysH SF2778 phosphoadenosine phosphosulfate reductasechromosome CDS2851602 735 - 0.514286
dfp SF3678 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS3782973 1293 + 0.525909
dinD SF3684 DNA-damage-inducible proteinchromosome CDS3788075 825 + 0.45697
dxs SF0357 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS367687 1863 - 0.539452
fepC SF0502 ATP-binding component of ferric enterobactin transportchromosome CDS522848 816 - 0.53799
fhuC SF0143 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS161556 798 + 0.561404
folA SF0045 dihydrofolate reductase type Ichromosome CDS49141 480 + 0.529167
folC SF2391 dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetasechromosome CDS2439786 1269 - 0.559496
folD SF0460 5,10-methylene-tetrahydrofolate dehydrogenase; 5,10-methylene-tetrahydrofolate cyclohydrolasechromosome CDS475386 867 - 0.545559
folE SF2238 GTP cyclohydrolase Ichromosome CDS2265463 669 - 0.509716
folK SF0134 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinasechromosome CDS149031 480 - 0.520833
folP SF3217 7,8-dihydropteroate synthasechromosome CDS3316246 894 - 0.510067
folX SF2379 D-erythro-7,8-dihydroneopterin triphosphate epimerasechromosome CDS2429438 363 + 0.449036
gshA SF2715 glutamate--cysteine ligasechromosome CDS2788781 1341 - 0.51305
gshB SF2938 glutathione synthetasechromosome CDS3030181 951 + 0.535226
hemA SF1213 glutamyl-tRNA reductasechromosome CDS1260595 1257 + 0.538584
hemB SF0249 delta-aminolevulinic acid dehydratasechromosome CDS268341 1008 + 0.537698
hemC SF3877 porphobilinogen deaminasechromosome CDS3998192 942 - 0.559448
hemD SF3876 uroporphyrinogen-III synthetasechromosome CDS3997455 741 - 0.530364
hemE SF4069 uroporphyrinogen decarboxylasechromosome CDS4216551 1065 + 0.561502
hemF SF2489 coproporphyrinogen III oxidasechromosome CDS2549161 900 + 0.551111
hemG SF3926 protoporphyrin oxidasechromosome CDS4047559 546 + 0.514652
hemH SF0420 ferrochelatasechromosome CDS434476 963 + 0.543095
hemL SF0146 glutamate-1-semialdehyde aminotransferasechromosome CDS165257 1281 - 0.557377
hemN SF3937 coproporphyrinogen III oxidasechromosome CDS4064734 1374 + 0.528384
hemX SF3875 uroporphyrinogen III methylasechromosome CDS3996216 1218 - 0.536125
hemY SF3874 HemY proteinchromosome CDS3995017 1197 - 0.543024
ilvB SF3790 acetolactate synthase large subunitchromosome CDS3898737 1599 + 0.564728
ilvC SF3848 ketol-acid reductoisomerasechromosome CDS3967355 1476 + 0.53523
ilvE SF3845 branched-chain amino acid aminotransferasechromosome CDS3961927 930 + 0.544086
ilvG SF3843 acetolactate synthase II large subunitchromosome CDS3960001 1647 + 0.545841
ilvI SF0072 acetolactate synthase III large subunitchromosome CDS83387 1809 + 0.524599
ispA SF0358 geranyltranstransferase (farnesyldiphosphate synthase)chromosome CDS369574 900 - 0.543333
ispB SF3227 octaprenyl diphosphate synthasechromosome CDS3325892 972 + 0.526749
kbl SF3657 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS3763827 1197 - 0.54386
kdtB SF3673 phosphopantetheine adenylyltransferasechromosome CDS3780139 480 + 0.527083
ldhA SF1814 D-lactate dehydrogenasechromosome CDS1851238 990 - 0.50202
lipA SF0653 lipoyl synthasechromosome CDS690305 966 + 0.534162
lipB SF0651 lipoyltransferasechromosome CDS688309 576 + 0.472222
menA SF4008 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS4134501 927 - 0.533981
menB SF2341 naphthoate synthasechromosome CDS2388692 858 - 0.551282
menC SF2340 O-succinylbenzoate synthasechromosome CDS2387730 963 - 0.5919
menD SF2343 2-oxoglutarate decarboxylasechromosome CDS2390319 1671 - 0.579294
menF SF2344 menaquinone-specific isochorismate synthasechromosome CDS2392078 1071 - 0.538749
menG SF4007 ribonuclease activity regulator protein RraAchromosome CDS4133923 486 - 0.522634
metK SF2933 S-adenosylmethionine synthetasechromosome CDS3024996 1155 + 0.532468
moaA SF0731 molybdenum cofactor biosynthesis protein Achromosome CDS759871 990 + 0.540404
moaB SF0732 molybdopterin biosynthesis protein Bchromosome CDS760882 513 + 0.524366
moaC SF0733 molybdenum cofactor biosynthesis protein Cchromosome CDS761397 486 + 0.561728
moaD SF0734 molybdopterin biosynthesis protein Dchromosome CDS761875 246 + 0.569106
moaE SF0735 molybdopterin converting factor, subunit 2chromosome CDS762122 453 + 0.578366
mobA SF3928 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4054103 585 - 0.509402
mobB SF3927 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4053594 528 - 0.484848
modD SF1190 molybdenum transport proteinchromosome CDS1234354 855 - 0.523977
moeA SF0777 molybdopterin biosynthesis MoeA proteinchromosome CDS809292 1236 - 0.563107
moeB SF0776 molybdopterin biosynthesis protein MoeBchromosome CDS808543 750 - 0.558667
mogA SF0010 molybdenum cofactor biosynthesis proteinchromosome CDS9305 588 + 0.540816
nadA SF0554 quinolinate synthetasechromosome CDS575045 1044 - 0.501916
nadC SF0106 nicotinate-nucleotide pyrophosphorylasechromosome CDS116016 894 - 0.533557
nadD SF0642 nicotinic acid mononucleotide adenyltransferasechromosome CDS679948 642 + 0.498442
nadE SF1486 NAD(+) synthetasechromosome CDS1522166 828 - 0.487923
nadR SF4422 nicotinamide-nucleotide adenylyltransferasechromosome CDS4592900 1254 + 0.512759
ospB CP0003 OspB, protein secreted by the Mxi-Spa secretion machinery, function unknownpCP301 CDS1176 867 + 0.32872
pabA SF3379 para-aminobenzoate synthase component IIchromosome CDS3459476 564 - 0.537234
pabB SF1416 para-aminobenzoate synthase component Ichromosome CDS1454127 1362 - 0.507342
pabC SF1100 4-amino-4-deoxychorismate lyasechromosome CDS1141015 810 + 0.506173
padI SF2762 phenylacrylic acid decarboxylase-like proteinchromosome CDS2837429 594 - 0.570707
panB SF0131 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS146898 795 - 0.538365
panC SF0130 pantoate--beta-alanine ligasechromosome CDS146035 852 - 0.5223
panD SF0128 aspartate 1-decarboxylase precursorchromosome CDS144405 381 - 0.527559
panF SF3296 sodium/panthothenate symporterchromosome CDS3395179 1452 + 0.541322
pdxA SF0049 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS51745 990 - 0.562626
pdxB SF2396 erythronate-4-phosphate dehydrogenasechromosome CDS2444827 1137 - 0.53562
pdxH SF1663 pyridoxamine 5'-phosphate oxidasechromosome CDS1694117 657 - 0.515982
pdxJ SF2626 pyridoxal phosphate biosynthetic proteinchromosome CDS2698213 732 - 0.553279
pdxK SF2473 pyridoxine kinasechromosome CDS2533686 852 - 0.516432
pdxY SF1661 pyridoxine kinasechromosome CDS1691744 864 - 0.52662
pncB SF0928 nicotinate phosphoribosyltransferasechromosome CDS974376 1203 - 0.512053
pnuC SF0553 PnuC proteinchromosome CDS574288 720 - 0.483333
poxB SF0826 pyruvate dehydrogenasechromosome CDS858567 1719 - 0.536358
ribA SF1281 GTP cyclohydrolase II proteinchromosome CDS1332854 591 - 0.499154
ribB SF3081 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3176948 654 - 0.527523
ribD SF0351 bifunctional pyrimidine deaminase/reductasechromosome CDS362952 1104 + 0.557065
ribE SF1690 riboflavin synthase subunit alphachromosome CDS1722328 642 - 0.478193
ribF SF0021 hypothetical proteinchromosome CDS20362 942 + 0.529724
ribH SF0352 riboflavin synthase subunit betachromosome CDS364144 471 + 0.522293
rimK SF0806 ribosomal protein S6 modification proteinchromosome CDS838722 903 + 0.554817
serA SF2898 D-3-phosphoglycerate dehydrogenasechromosome CDS2991484 1233 - 0.52717
serC SF0902 phosphoserine aminotransferasechromosome CDS940005 1089 + 0.503214
tbpA SF0063 thiamin-binding periplasmic proteinchromosome CDS72339 984 - 0.527439
thiC SF4066 thiamine biosynthesis protein ThiCchromosome CDS4213038 1896 - 0.55538
thiD SF2165 phosphomethylpyrimidine kinasechromosome CDS2189239 801 - 0.55181
thiE SF4065 thiamine-phosphate pyrophosphorylasechromosome CDS4212403 636 - 0.578616
thiF SF4064 thiamine biosynthesis protein ThiFchromosome CDS4211655 756 - 0.56746
thiG SF4063 thiazole synthasechromosome CDS4210699 846 - 0.58156
thiH SF4062 thiamine biosynthesis protein ThiHchromosome CDS4209569 1134 - 0.547619
thiL SF0354 thiamine monophosphate kinasechromosome CDS365131 978 + 0.543967
thiM SF2166 hydroxyethylthiazole kinasechromosome CDS2190036 789 - 0.541191
trbH CP0244 hypothetical proteinpCP301 CDS198108 720 + 0.495833
trpD SF1266 anthranilate phosphoribosyltransferasechromosome CDS1316110 1596 - 0.561404
trpE SF1267 anthranilate synthase component Ichromosome CDS1317705 1563 - 0.539987
ubiA SF4165 4-hydroxybenzoate octaprenyltransferasechromosome CDS4335894 873 - 0.510882
ubiB SF3920 NAD(P)H-flavin reductasechromosome CDS4039667 702 + 0.527066
ubiC SF4166 chorismate lyasechromosome CDS4336779 498 - 0.52008
ubiE SF3911 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4031995 756 + 0.519841
ubiG SF2312 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2355007 723 + 0.543568
ubiH SF2893 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS2986254 1179 - 0.597116
ubiX SF2387 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2436169 570 - 0.531579
visC SF2892 hypothetical proteinchromosome CDS2985029 1203 - 0.551953
yabJ SF0061 putative ATP-binding component of a transport systemchromosome CDS70071 699 - 0.572246
yclC SF2761 putative 4-hydroxybenzoate decarboxylasechromosome CDS2836479 951 - 0.564669
ygcM SF2781 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2856240 363 + 0.490358
ygdL SF2826 putative enzymechromosome CDS2905471 807 - 0.551425
ygfA SF2897 putative ligasechromosome CDS2990155 549 + 0.520947
yggW SF2946 coproporphyrinogen III oxidasechromosome CDS3035562 1137 + 0.523307
ygiG SF3099 putative kinasechromosome CDS3193329 369 - 0.506775
yhhU SF3493 hypothetical proteinchromosome CDS3583493 588 + 0.566327
yiaE SF3587 2-hydroxyacid dehydrogenasechromosome CDS3688375 975 + 0.52
yieE SF3748 hypothetical proteinchromosome CDS3856086 750 - 0.521333
yigC SF3919 putative oxidoreductasechromosome CDS4038128 1494 + 0.535475
yleB SF0620 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS655443 1176 - 0.560374
yojL SF2298 hypothetical proteinchromosome CDS2331865 1056 - 0.534091
 
Shigella flexneri 5 str. 8401, 8401
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SFV_1207 putative iron compound ABC transporter, ATP-binding proteinchromosome CDS1250867 759 - 0.540184
NA SFV_1689 hypothetical proteinchromosome CDS1725833 306 + 0.447712
NA SFV_2432 putative enzymechromosome CDS2487059 1695 - 0.464307
NA SFV_2759 phenylacrylic acid decarboxylase-like proteinchromosome CDS2825996 594 + 0.56734
NA SFV_4031 starvation-sensing proteinchromosome CDS4146101 1215 + 0.501235
NA SFV_0554 hypothetical proteinchromosome CDS583894 411 - 0.506083
NA SFV_1208 putative iron compound ABC transporter, permease proteinchromosome CDS1251622 981 - 0.541284
NA SFV_1608 hypothetical proteinchromosome CDS1640261 696 - 0.520115
apbA SFV_0390 alternative pyrimidine biosynthesischromosome CDS407075 912 - 0.513158
bioA SFV_0758 7,8-diaminopelargonic acid synthetasechromosome CDS786773 1401 - 0.549607
bioB SFV_0757 biotin synthesischromosome CDS788149 1041 + 0.554275
bioD SFV_0761 dethiobiotin synthetasechromosome CDS791075 678 + 0.539823
bioF SFV_0759 8-amino-7-oxononanoate synthasechromosome CDS789186 1155 + 0.586147
birA SFV_4046 biotin--protein ligasechromosome CDS4164019 966 + 0.493789
btuC SFV_1512 vitamin B12 transport permease proteinchromosome CDS1552439 981 + 0.549439
btuD SFV_1514 ATP-binding component of vitamin B12 transport systemchromosome CDS1554033 750 + 0.550667
btuR SFV_1282 cob(I)alamin adenolsyltransferasechromosome CDS1335982 591 - 0.510998
citG SFV_0566 hypothetical proteinchromosome CDS595841 879 - 0.552901
coaA SFV_4047 pantothenate kinasechromosome CDS4165013 1107 - 0.443541
cobS SFV_2064 cobalamin 5'-phosphate synthasechromosome CDS2084091 744 - 0.534946
cobT SFV_2063 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS2083000 1080 - 0.511111
cobU SFV_2065 cobinamide kinase/cobinamide phosphate guanylyltransferasechromosome CDS2084831 546 - 0.498168
cysD SFV_2746 ATP:sulfurylase (ATP:sulfate adenylyltransferase), subunit 2chromosome CDS2815552 909 + 0.536854
cysG SFV_3374 sirohaeme biosynthesischromosome CDS3428969 1374 + 0.542213
cysH SFV_2743 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS2811682 735 + 0.515646
dfp SFV_3891 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS3994122 1221 - 0.532351
dxs SFV_0385 1-deoxyxylulose-5-phosphate synthasechromosome CDS401786 1797 - 0.540901
fepC SFV_0536 ATP-binding component of ferric enterobactin transportchromosome CDS566212 816 - 0.53799
fepG SFV_0537 ferric enterobactin transport proteinchromosome CDS567024 993 - 0.584089
fhuC SFV_0136 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS161189 840 + 0.559524
folA SFV_0042 dihydrofolate reductase type Ichromosome CDS48809 480 + 0.529167
folC SFV_2384 dihydrofolate synthetasechromosome CDS2433683 1269 - 0.560284
folD SFV_0487 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS512942 825 - 0.550303
folE SFV_2228 GTP cyclohydrolase Ichromosome CDS2259154 669 - 0.509716
folK SFV_0127 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinasechromosome CDS148706 480 - 0.520833
folP SFV_3207 7,8-dihydropteroate synthasechromosome CDS3279903 849 - 0.515901
folX SFV_2370 D-erythro-7,8-dihydroneopterin tri P epimerasechromosome CDS2421997 363 + 0.449036
gcl SFV_0474 glyoxylate carboligasechromosome CDS501155 1830 + 0.521858
gshA SFV_2816 gamma-glutamate-cysteine ligasechromosome CDS2880219 1557 + 0.512524
gshB SFV_3001 glutathione synthetasechromosome CDS3068749 951 + 0.535226
hemA SFV_1224 HemAchromosome CDS1273119 1455 + 0.524399
hemB SFV_0333 delta-aminolevulinic acid dehydratasechromosome CDS351938 1008 - 0.53869
hemC SFV_3697 porphobilinogen deaminasechromosome CDS3783728 963 + 0.555556
hemD SFV_3698 uroporphyrinogen III synthasechromosome CDS3784687 741 + 0.529015
hemE SFV_4069 uroporphyrinogen decarboxylasechromosome CDS4187734 1065 + 0.562441
hemF SFV_2488 coproporphyrinogen III oxidasechromosome CDS2542863 900 + 0.55
hemG SFV_3650 protoporphyrin oxidasechromosome CDS3735564 546 - 0.514652
hemH SFV_0448 ferrochelatasechromosome CDS472126 963 + 0.543095
hemL SFV_0139 glutamate-1-semialdehyde aminotransferase (aminomutase)chromosome CDS164932 1281 - 0.558158
hemN SFV_3634 O2-independent coproporphyrinogen III oxidasechromosome CDS3716785 1374 - 0.527656
hemY SFV_3700 a late step of protoheme IX synthesischromosome CDS3786669 1197 + 0.543024
ilvB SFV_3838 acetolactate synthase I,valine-sensitive, large subunitchromosome CDS3934050 1689 + 0.560687
ilvC SFV_3729 ketol-acid reductoisomerasechromosome CDS3814053 1611 - 0.523277
ilvE SFV_3732 branched-chain amino-acid aminotransferasechromosome CDS3820027 855 - 0.548538
ilvG SFV_3734 Acetolactate synthase II, large subunitchromosome CDS3821236 1647 - 0.545234
ilvI SFV_0068 acetolactate synthase isozyme III large subunitchromosome CDS83165 1701 + 0.527925
ispA SFV_0386 geranyltranstransferase (farnesyldiphosphate synthase)chromosome CDS403673 900 - 0.543333
ispB SFV_3217 octaprenyl diphosphate synthasechromosome CDS3289549 972 + 0.526749
kbl SFV_3911 2-amino-3-ketobutyrate CoA ligasechromosome CDS4013324 1197 + 0.543024
kdtB SFV_3895 putative enzyme of lipopolysaccharide synthesischromosome CDS3997769 480 - 0.527083
ldhA SFV_1805 fermentative D-lactate dehydrogenasechromosome CDS1849309 990 - 0.50101
lipA SFV_0698 lipoate synthesischromosome CDS734806 951 + 0.537329
lipB SFV_0696 protein of lipoate biosynthesischromosome CDS732729 642 + 0.476636
menA SFV_4001 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4105778 927 - 0.532902
menB SFV_2333 dihydroxynaphtoic acid synthetasechromosome CDS2382439 858 - 0.551282
menC SFV_2332 O-succinylbenzoate synthasechromosome CDS2381477 927 - 0.590075
menD SFV_2335 2-oxoglutarate decarboxylasechromosome CDS2384066 1860 - 0.565591
menF SFV_2336 isochorismate hydroxymutase 2chromosome CDS2385825 1296 - 0.534722
menG SFV_4000 menaquinone biosynthesis, unknownchromosome CDS4105200 486 - 0.520576
metK SFV_2996 S-adenosylmethionine synthetasechromosome CDS3063566 1155 + 0.533333
moaA SFV_0764 molybdopterin biosynthesis, protein Achromosome CDS795817 1023 + 0.540567
moaB SFV_0765 molybdopterin biosynthesis, protein Bchromosome CDS796861 513 + 0.524366
moaC SFV_0766 molybdopterin biosynthesis, protein Cchromosome CDS797376 486 + 0.561728
moaD SFV_0767 molybdopterin biosynthesischromosome CDS797854 246 + 0.569106
moaE SFV_0768 molybdopterin converting factor, subunit 2chromosome CDS798101 453 + 0.576159
mobA SFV_3644 putative mobilization protein MobAchromosome CDS3728990 576 + 0.512153
modD SFV_1205 putative molybdenum transport proteinchromosome CDS1249194 855 - 0.523977
moeA SFV_0810 molybdopterin biosynthesischromosome CDS845272 1236 - 0.563916
moeB SFV_0809 molybdopterin biosynthesischromosome CDS844523 726 - 0.557851
mog SFV_0008 predicted molybdochelatasechromosome CDS9368 591 + 0.539763
nadA SFV_0590 quinolinate synthetase, A proteinchromosome CDS618143 1044 - 0.503831
nadC SFV_0100 quinolinate phosphoribosyltransferasechromosome CDS115686 894 - 0.533557
nadE SFV_1480 NAD synthetasechromosome CDS1524623 828 - 0.487923
nadR SFV_4424 probable nadAB transcriptional regulatorchromosome CDS4560002 1233 + 0.514193
pabA SFV_3366 p-aminobenzoate synthetase, component IIchromosome CDS3421398 564 - 0.537234
pabB SFV_1417 p-aminobenzoate synthetase, component Ichromosome CDS1464666 1362 - 0.507342
pabC SFV_1116 4-amino-4-deoxychorismate lyasechromosome CDS1159092 810 + 0.506173
panB SFV_0124 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS146573 795 - 0.537107
panC SFV_0123 pantothenate synthetasechromosome CDS145710 852 - 0.5223
panD SFV_0121 aspartate 1-decarboxylasechromosome CDS144080 381 - 0.527559
panF SFV_3283 sodium/pantothenate symporterchromosome CDS3357838 1452 + 0.542011
pdxA SFV_0046 pyridoxine biosynthesischromosome CDS51413 990 - 0.562626
pdxB SFV_2389 erythronate-4-phosphate dehyrogenasechromosome CDS2438724 1137 - 0.5365
pdxH SFV_1655 pyridoxinephosphate oxidasechromosome CDS1693557 657 - 0.515982
pdxJ SFV_2627 pyridoxine biosynthesischromosome CDS2694693 732 - 0.553279
pdxK SFV_2470 pyridoxal/pyridoxine/pyridoxamine kinasechromosome CDS2527388 852 - 0.517606
pdxY SFV_1653 pyridoxine kinasechromosome CDS1691232 861 - 0.527294
pncB SFV_0933 nicotinate phosphoribosyltransferasechromosome CDS981315 1251 - 0.511591
pnuC SFV_0589 required for NMN transportchromosome CDS617386 720 - 0.483333
poxB SFV_0859 pyruvate oxidasechromosome CDS893999 1719 - 0.535777
ribA SFV_1290 GTP cyclohydrolase IIchromosome CDS1346786 591 - 0.500846
ribB SFV_3085 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS3150690 654 - 0.527523
ribD SFV_0379 5-amino-6-(5-phosphoribosylamino)uracil reductasechromosome CDS397069 1086 + 0.558011
ribE SFV_1684 riboflavin synthase, alpha chainchromosome CDS1721734 642 - 0.478193
ribF SFV_0019 putative regulatorchromosome CDS20428 942 + 0.529724
ribH SFV_0380 riboflavin synthase, beta chainchromosome CDS398189 525 + 0.525714
rimK SFV_0837 ribosomal protein S6 modification proteinchromosome CDS873377 903 + 0.555925
rspA SFV_1563 starvation sensing proteinchromosome CDS1599987 1215 + 0.507819
serA SFV_2960 D-3-phosphoglycerate dehydrogenasechromosome CDS3030087 1233 - 0.52717
serC SFV_0907 3-phosphoserine aminotransferasechromosome CDS946978 1053 + 0.507123
tbpA SFV_0060 thiamin-binding periplasmic proteinchromosome CDS72007 984 - 0.529472
thiC SFV_4066 thiamin biosynthesis, pyrimidine moietychromosome CDS4184221 1896 - 0.55538
thiD SFV_2158 phosphomethylpyrimidine kinasechromosome CDS2191521 801 - 0.55181
thiE SFV_4065 thiamin biosynthesis, thiazole moietychromosome CDS4183586 636 - 0.578616
thiF SFV_4064 thiamin biosynthesis, thiazole moietychromosome CDS4182838 756 - 0.56746
thiH SFV_4061 thiamin biosynthesis, thiazole moietychromosome CDS4180752 1134 - 0.546737
thiL SFV_0382 thiamin-monophosphate kinasechromosome CDS399230 978 + 0.542945
thiM SFV_2159 hydoxyethylthiazole kinasechromosome CDS2192318 789 - 0.541191
thiS SFV_4062 Sulfur transfer proteinchromosome CDS4182654 201 - 0.552239
trpE SFV_1278 anthranilate synthase component Ichromosome CDS1331635 1563 - 0.539987
ubiA SFV_4173 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4308379 873 - 0.512028
ubiB SFV_3656 NAD(P)H-flavin reductasechromosome CDS3743300 735 - 0.526531
ubiC SFV_4174 chorismate lyasechromosome CDS4309264 609 - 0.499179
ubiE SFV_3665 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS3750918 756 - 0.519841
ubiG SFV_2303 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2348731 723 + 0.543568
ubiH SFV_2955 2-octaprenyl-6-methoxyphenol 4-monoxygenasechromosome CDS3024857 1179 - 0.597116
ubiX SFV_2380 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2430065 570 - 0.531579
visC SFV_2954 hypothetical proteinchromosome CDS3023632 1203 - 0.550291
yabJ SFV_0058 putative ATP-binding component of a transport systemchromosome CDS69739 699 - 0.567954
yabK SFV_0059 putative transport system permease proteinchromosome CDS70421 1611 - 0.584109
yacE SFV_0095 putative DNA repair proteinchromosome CDS110771 621 - 0.523349
ybdU SFV_0567 hypothetical proteinchromosome CDS596694 552 - 0.586957
ybeN SFV_0687 hypothetical proteinchromosome CDS724434 642 + 0.498442
yclC SFV_2760 putative 4-hydroxybenzoate decarboxylasechromosome CDS2826589 951 + 0.56572
ygcM SFV_2740 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS2807416 450 - 0.473333
ygcX SFV_2670 putative glucarate dehydratasechromosome CDS2741535 1341 + 0.529456
ygdL SFV_2891 putative enzymechromosome CDS2952472 807 - 0.551425
ygfA SFV_2959 putative ligasechromosome CDS3028560 747 + 0.527443
yggC SFV_2980 putative kinasechromosome CDS3049807 714 - 0.542017
yggW SFV_3009 putative oxidasechromosome CDS3074130 1137 + 0.524186
ygiG SFV_3098 putative kinasechromosome CDS3165180 369 - 0.506775
yhhU SFV_3478 hypothetical proteinchromosome CDS3543904 588 + 0.569728
yiaE SFV_3534 putative dehydrogenasechromosome CDS3602120 975 - 0.518974
yieE SFV_3799 hypothetical proteinchromosome CDS3890989 750 - 0.521333
yigC SFV_3657 putative oxidoreductasechromosome CDS3744047 1494 - 0.536145
yjcG SFV_4144 putative transport proteinchromosome CDS4276837 1539 + 0.551007
yleB SFV_0665 hypothetical proteinchromosome CDS699929 1176 - 0.561224
yojL SFV_2289 hypothetical proteinchromosome CDS2325590 1056 - 0.533144
 
Shigella sonnei Ss046, Ss046
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SSON_1489 hypothetical proteinchromosome CDS1564972 306 - 0.447712
NA SSON_2464 putative enzymechromosome CDS2603424 1695 - 0.466077
NA SSON_1571 hypothetical proteinchromosome CDS1650912 708 + 0.522599
apbA SSON_0402 ApbAchromosome CDS428573 912 - 0.519737
bioA SSON_0753 7,8-diaminopelargonic acid synthetasechromosome CDS797054 1290 - 0.562016
bioB SSON_0754 biotin synthesischromosome CDS798430 1041 + 0.551393
bioD SSON_0757 dethiobiotin synthetasechromosome CDS801356 678 + 0.536873
bioF SSON_0755 8-amino-7-oxononanoate synthasechromosome CDS799467 1155 + 0.585281
birA SSON_4146 biotin-[acetylCoA carboxylase] holoenzyme synthetase and biotin operon repressorchromosome CDS4392213 966 + 0.496894
btuB SSON_4139 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS4383024 1845 + 0.501355
btuC SSON_1447 vitamin B12 transport permease proteinchromosome CDS1521504 981 + 0.552497
btuD SSON_1449 ATP-binding component of vitamin B12 transport systemchromosome CDS1523098 750 + 0.544
btuR SSON_1873 cob(I)alamin adenolsyltransferasechromosome CDS1971955 591 + 0.509306
citG SSON_0565 hypothetical proteinchromosome CDS605634 879 - 0.546075
coaA SSON_4147 pantothenate kinasechromosome CDS4393207 951 - 0.443743
cobS SSON_2053 cobalamin 5'-phosphate synthasechromosome CDS2152482 744 - 0.532258
cobT SSON_2052 nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferasechromosome CDS2151391 1080 - 0.524074
cobU SSON_2054 cobinamide kinase/cobinamide phosphate guanylyltransferasechromosome CDS2153222 546 - 0.509158
cysD SSON_2900 ATP-sulfurylase subunit 2chromosome CDS3039065 909 - 0.533553
cysG SSON_3499 uroporphyrinogen III methylase; sirohaeme biosynthesischromosome CDS3659827 1374 + 0.54294
cysH SSON_2915 3'-phosphoadenosine 5'-phosphosulfate reductasechromosome CDS3053416 735 - 0.502041
dfp SSON_3767 flavoprotein affecting synthesis of DNA and pantothenate metabolismchromosome CDS3953154 1293 - 0.530549
dxs SSON_0397 1-deoxyxylulose-5-phosphate synthase; flavoproteinchromosome CDS423284 1863 - 0.543747
entC SSON_0544 isochorismate hydroxymutase 2chromosome CDS584416 1176 + 0.562925
fecE SSON_4459 ATP-binding component of citrate-dependent iron(III) transport proteinchromosome CDS4730804 768 - 0.53776
fepC SSON_0539 ATP-binding component of ferric enterobactin transportchromosome CDS578829 816 - 0.536765
fhuC SSON_0163 ATP-binding component of hydroxymate-dependent iron transportchromosome CDS183921 798 + 0.562657
folA SSON_0056 dihydrofolate reductase type Ichromosome CDS59159 480 + 0.53125
folC SSON_2373 dihydrofolate:folylpolyglutamate synthetasechromosome CDS2503442 1269 - 0.55792
folD SSON_0489 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS519544 867 + 0.546713
folE SSON_2209 GTP cyclohydrolase Ichromosome CDS2315802 669 - 0.505232
folK SSON_0154 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinasechromosome CDS171450 480 - 0.516667
folP SSON_3325 7,8-dihydropteroate synthasechromosome CDS3503136 894 - 0.512304
folX SSON_2360 D-erythro-7,8-dihydroneopterin tri P epimerasechromosome CDS2492316 363 + 0.443526
gshA SSON_2832 gamma-glutamate-cysteine ligasechromosome CDS2976107 1557 - 0.512524
gshB SSON_3101 glutathione synthetasechromosome CDS3263604 951 + 0.534175
hemA SSON_1968 enzyme in alternate path of synthesis of 5-aminolevulinatechromosome CDS2069786 1257 - 0.539379
hemB SSON_0347 5-aminolevulinate dehydratasechromosome CDS372834 1008 - 0.536706
hemC SSON_3977 porphobilinogen deaminasechromosome CDS4198963 963 - 0.554517
hemD SSON_3976 uroporphyrinogen III synthasechromosome CDS4198226 741 - 0.530364
hemE SSON_4170 uroporphyrinogen decarboxylasechromosome CDS4415928 1065 + 0.558685
hemF SSON_2525 coproporphyrinogen III oxidasechromosome CDS2661981 900 + 0.547778
hemG SSON_4023 protoporphyrin oxidasechromosome CDS4251862 546 + 0.507326
hemH SSON_0462 ferrochelatasechromosome CDS490139 963 + 0.544133
hemL SSON_0166 glutamate-1-semialdehyde aminotransferase (aminomutase)chromosome CDS187745 1281 - 0.555816
hemN SSON_4039 O2-independent coproporphyrinogen III oxidasechromosome CDS4268979 1380 + 0.531159
hemX SSON_3975 uroporphyrinogen III methylasechromosome CDS4196987 1218 - 0.541872
hemY SSON_3974 HemYchromosome CDS4195788 1197 - 0.544695
ilvB SSON_3625 valine-sensitive acetolactate synthase large subunitchromosome CDS3794112 1689 - 0.558911
ilvC SSON_3945 ketol-acid reductoisomerasechromosome CDS4167325 1476 + 0.544715
ilvE SSON_3941 branched-chain amino-acid aminotransferasechromosome CDS4161839 930 + 0.548387
ilvG SSON_3939 Acetolactate synthase II, large subunitchromosome CDS4159913 1647 + 0.544019
ilvI SSON_0084 acetolactate synthase isozyme III large subunitchromosome CDS94190 1725 + 0.527536
ispA SSON_0398 geranyltranstransferasechromosome CDS425171 900 - 0.542222
ispB SSON_3335 octaprenyl diphosphate synthasechromosome CDS3512783 972 + 0.524691
kbl SSON_3787 2-amino-3-ketobutyrate CoA ligasechromosome CDS3972135 1197 + 0.542189
kdtB SSON_3773 putative enzyme of lipopolysaccharide synthesischromosome CDS3957578 480 - 0.529167
ldhA SSON_1744 fermentative D-lactate dehydrogenase, NAD-dependentchromosome CDS1849006 990 + 0.50404
lipA SSON_0582 LipAchromosome CDS620533 966 - 0.533126
lipB SSON_0584 protein of lipoate biosynthesischromosome CDS622920 576 - 0.473958
lplA SSON_4536 lipoate-protein ligase Achromosome CDS4806768 1017 - 0.576205
menA SSON_4099 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4333463 927 - 0.533981
menB SSON_2323 dihydroxynaphtoic acid synthetasechromosome CDS2451797 858 - 0.548951
menC SSON_2322 O-succinylbenzoyl-CoA synthasechromosome CDS2450835 963 - 0.58567
menD SSON_2325 2-oxoglutarate decarboxylasechromosome CDS2453424 1671 - 0.582884
menF SSON_2326 isochorismate hydroxymutase 2chromosome CDS2455183 1071 - 0.542484
menG SSON_4098 MenGchromosome CDS4332885 486 - 0.516461
metK SSON_3096 methionine adenosyltransferase 1 (AdoMet synthetase); methyl and propylamine donor, corepressor of met geneschromosome CDS3258417 1155 + 0.532468
mhpA SSON_0297 3-(3-hydroxyphenyl)propionate hydroxylasechromosome CDS324220 1665 - 0.568168
moaA SSON_0760 molybdopterin biosynthesis, protein Achromosome CDS806130 990 + 0.539394
moaB SSON_0761 molybdopterin biosynthesis, protein Bchromosome CDS807141 513 + 0.524366
moaC SSON_0762 molybdopterin biosynthesis, protein Cchromosome CDS807656 486 + 0.561728
moaD SSON_0763 molybdopterin biosynthesischromosome CDS808134 246 + 0.569106
moaE SSON_0764 molybdopterin converting factor, subunit 2chromosome CDS808381 453 + 0.573951
mobA SSON_4029 molybdopterin-guanine dinucleotide biosynthesis protein Archromosome CDS4258407 585 - 0.499145
mobB SSON_4028 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4257898 513 - 0.48538
moeA SSON_0809 molybdopterin biosynthesischromosome CDS860382 1236 - 0.566343
moeB SSON_0808 molybdopterin biosynthesischromosome CDS859633 750 - 0.557333
mog SSON_0010 required for the efficient incorporation of molybdate into molybdoproteinschromosome CDS10082 588 + 0.537415
nadC SSON_0117 quinolinate phosphoribosyltransferasechromosome CDS126980 894 - 0.533557
nadE SSON_1418 NAD synthetasechromosome CDS1492584 828 - 0.492754
nadR SSON_4540 probable nadAB transcriptional regulatorchromosome CDS4810961 1254 + 0.504785
ospB SSO_P003 OspBpSS_046 CDS1176 867 + 0.32872
pabA SSON_3491 p-aminobenzoate synthetase, component IIchromosome CDS3652265 564 - 0.537234
pabB SSON_1348 p-aminobenzoate synthetase, component Ichromosome CDS1423168 1362 - 0.504405
pabC SSON_1116 4-amino-4-deoxychorismate lyasechromosome CDS1194591 810 + 0.504938
panB SSON_0142 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS157995 795 - 0.54717
panC SSON_0141 pantothenate synthetasechromosome CDS157132 852 - 0.530516
panD SSON_0139 aspartate 1-decarboxylasechromosome CDS155290 381 - 0.524934
panF SSON_3399 sodium/pantothenate symporterchromosome CDS3580388 1458 + 0.544582
pdxA SSON_0060 pyridoxine biosynthesischromosome CDS61763 990 - 0.563636
pdxB SSON_2378 erythronate-4-phosphate dehyrogenasechromosome CDS2508483 1137 - 0.528584
pdxH SSON_1518 pyridoxinephosphate oxidasechromosome CDS1593907 657 + 0.517504
pdxJ SSON_2688 pyridoxine biosynthesischromosome CDS2846063 732 - 0.553279
pdxK SSON_2508 pyridoxal/pyridoxine/pyridoxamine kinasechromosome CDS2646416 852 - 0.518779
pdxY SSON_1520 pyridoxal kinase 2/pyridoxine kinasechromosome CDS1596025 864 + 0.528935
pncB SSON_0934 nicotinate phosphoribosyltransferasechromosome CDS1006301 1203 - 0.512884
pnuC SSON_0703 required for NMN transportchromosome CDS745182 720 + 0.480556
poxB SSON_0857 pyruvate oxidasechromosome CDS908612 1719 - 0.541012
ribA SSON_1863 GTP cyclohydrolase IIchromosome CDS1960376 591 + 0.497462
ribB SSON_3178 3,4 dihydroxy-2-butanone-4-phosphate synthasechromosome CDS3337321 654 - 0.527523
ribD SSON_0391 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesischromosome CDS418549 1104 + 0.558877
ribE SSON_1494 riboflavin synthase, alpha chainchromosome CDS1568735 642 + 0.475078
ribF SSON_0030 putative regulatorchromosome CDS28573 942 + 0.531847
ribH SSON_0392 riboflavin synthase, beta chainchromosome CDS419741 471 + 0.522293
rimK SSON_0837 ribosomal protein S6 modification proteinchromosome CDS888767 903 + 0.560354
serA SSON_3065 D-3-phosphoglycerate dehydrogenasechromosome CDS3227372 1233 - 0.527981
serC SSON_0908 3-phosphoserine aminotransferasechromosome CDS971922 1089 + 0.504132
tbpA SSON_0074 thiamin-binding periplasmic proteinchromosome CDS82281 984 - 0.529472
thiC SSON_4167 ThiCchromosome CDS4412415 1896 - 0.557489
thiD SSON_2151 phosphomethylpyrimidine kinasechromosome CDS2255413 801 - 0.549313
thiE SSON_4166 ThiEchromosome CDS4411780 636 - 0.580189
thiF SSON_4165 ThiFchromosome CDS4411032 738 - 0.571816
thiG SSON_4163 ThiGchromosome CDS4410076 846 - 0.57565
thiH SSON_4162 ThiHchromosome CDS4408946 1134 - 0.549383
thiL SSON_0394 thiamin-monophosphate kinasechromosome CDS420728 978 + 0.543967
thiM SSON_2152 hydoxyethylthiazole kinasechromosome CDS2256210 789 - 0.547529
thiS SSON_4164 Sulfur transfer proteinchromosome CDS4410848 201 - 0.552239
trbH SSO_P191 hypothetical proteinpSS_046 CDS168626 720 + 0.501389
trpD SSON_1880 anthranilate synthase component IIchromosome CDS1978146 1596 + 0.560777
trpE SSON_1879 anthranilate synthase component Ichromosome CDS1976584 1563 + 0.547665
ubiA SSON_4220 4-hydroxybenzoate-octaprenyltransferasechromosome CDS4477439 873 + 0.514318
ubiB SSON_4017 ferrisiderophore reductasechromosome CDS4243972 702 + 0.518519
ubiC SSON_4219 chorismate lyasechromosome CDS4476818 609 + 0.502463
ubiE SSON_4008 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4236299 756 + 0.519841
ubiG SSON_2290 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylasechromosome CDS2411744 723 + 0.543568
ubiH SSON_3060 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3222144 1179 - 0.601357
ubiX SSON_2369 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2499825 570 - 0.529825
visC SSON_3059 hypothetical proteinchromosome CDS3220919 1203 - 0.546966
yabJ SSON_0072 putative ATP-binding component of a transport systemchromosome CDS80013 699 - 0.573677
yacE SSON_0111 putative DNA repair proteinchromosome CDS121826 621 - 0.52818
ybdU SSON_0566 hypothetical proteinchromosome CDS606487 552 - 0.586957
ybeN SSON_0593 hypothetical proteinchromosome CDS631214 642 - 0.501558
ycdW SSON_1042 putative dehydrogenasechromosome CDS1125477 978 + 0.510225
ygcM SSON_2918 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS3058052 366 + 0.494536
ygdL SSON_2969 putative enzymechromosome CDS3114812 807 - 0.550186
ygfA SSON_3064 putative ligasechromosome CDS3226045 549 + 0.520947
yggC SSON_3085 putative kinasechromosome CDS3248082 714 - 0.540616
yggW SSON_3109 putative oxidasechromosome CDS3268984 1137 + 0.531223
ygiG SSON_3195 putative kinasechromosome CDS3358452 372 - 0.505376
yhhU SSON_3713 hypothetical proteinchromosome CDS3890238 588 + 0.569728
yiaE SSON_3835 putative dehydrogenasechromosome CDS4027718 987 - 0.515704
yieE SSON_3556 hypothetical proteinchromosome CDS3724656 762 + 0.520997
yigC SSON_4016 putative oxidoreductasechromosome CDS4242432 1494 + 0.539491
yleB SSON_0616 hypothetical proteinchromosome CDS657206 1176 + 0.564626
yojL SSON_2272 hypothetical proteinchromosome CDS2384673 1056 - 0.530303
 
Sodalis glossinidius str. morsitans, morsitans
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SG0521 ATP-sulfurylase subunit 2chromosome CDS906657 909 + 0.557756
NA SG0431 thiamine ABC transporter ATP-binding componentchromosome CDS758001 699 - 0.610873
NA SG1410 GTP cyclohydrolase IIchromosome CDS2340601 600 - 0.585
NA SG0793 lipoate-protein ligase Bchromosome CDS1346196 660 - 0.612121
NA SG0136 putative thiamine biosynthesis protein ThiHchromosome CDS226321 837 - 0.602151
NA SG1529 delta-aminolevulinic acid dehydratasechromosome CDS2590366 975 - 0.590769
NA SG0626 putative 2-hydroxyacid-family dehydrogenasechromosome CDS1069259 636 + 0.599057
NA SG0957 GTP cyclohydrolase Ichromosome CDS1579559 666 + 0.524024
NA SG0117 flavin reductasechromosome CDS195124 702 + 0.549858
NA SG1866 NH3-dependent NAD synthasechromosome CDS3198156 825 + 0.563636
NA SG0654 thiamin-monophosphate kinase ThiLchromosome CDS1115835 987 + 0.587639
NA SG2009 D-3-phosphoglycerate dehydrogenasechromosome CDS3465531 1233 - 0.548256
NA SG2008 hypothetical proteinchromosome CDS3464787 630 + 0.609524
NA SG1401 anthranilate synthase component II TrpDchromosome CDS2325443 579 - 0.594128
NA SG2143 4-hydroxybenzoate octaprenyltransferasechromosome CDS3721254 873 - 0.548683
NA SG2032 putative coproporphyrinogen III oxidasechromosome CDS3498896 1131 + 0.600354
NA SG0694 ferrochelatasechromosome CDS1169678 1008 + 0.602183
NA SG1063 4-amino-4-deoxychorismate lyasechromosome CDS1765730 798 + 0.619048
NA SG2368 uroporphyrinogen III methylasechromosome CDS4065422 1233 + 0.604217
NA SG0651 riboflavin biosynthesis protein RibDchromosome CDS1113643 1128 + 0.667553
NA SG0489 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinasechromosome CDS846619 507 - 0.61144
NA SG0486 aspartate 1-decarboxylase precursorchromosome CDS844239 381 - 0.574803
NA SG0812 putative 2-octaprenyl-3-methyl-6-methoxy-1,4- benzoquinol hydroxylasechromosome CDS1369117 1185 + 0.652321
NA SGP1_0035 achromobactin ABC transporter ATP-binding component cbrDpSG1 CDS59058 789 - 0.569075
NA SG0902 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS1465259 1290 - 0.64031
NA SG0126 pantothenate kinasechromosome CDS210405 951 - 0.543638
NA SG0413 riboflavin biosynthesis proteinchromosome CDS731615 939 + 0.618743
NA SG0076 putative salicylate hydroxylasechromosome CDS121369 1167 - 0.556127
NA SG1739 putative hydoxyethylthiazole kinasechromosome CDS2969238 579 - 0.613126
NA SG0125 bifunctional protein biotin operon repressor and biotin-acetyl-CoA carboxylase synthasechromosome CDS208251 960 + 0.570833
NA SG0372 dihydropteroate synthasechromosome CDS668550 846 + 0.602837
NA SG0657 geranyltranstransferasechromosome CDS1119858 903 - 0.624585
NA SG0263 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS481694 654 + 0.593272
NA SG0248 hypothetical proteinchromosome CDS461153 396 + 0.60101
NA SG1877 glutamyl-tRNA reductasechromosome CDS3212826 1263 - 0.599367
NA SG0433 thiamine ABC transporter periplasmic componentchromosome CDS760407 975 - 0.584615
NA SG0990 phosphoserine aminotransferasechromosome CDS1630290 1086 + 0.558011
NA SG0520 siroheme synthasechromosome CDS905230 1416 + 0.635593
NA SG0792 lipoate synthasechromosome CDS1345052 966 - 0.568323
NA SG0362 octaprenyl-diphosphate synthasechromosome CDS656421 972 - 0.580247
NA SG2144 putative chorismate lyasechromosome CDS3722139 585 - 0.642735
NA SG0903 biotin synthase BioBchromosome CDS1466652 1038 + 0.595376
NA SG2391 ketol-acid reductoisomerasechromosome CDS4098536 1479 - 0.567951
NA SG0500 glutamate-1-semialdehyde aminotransferasechromosome CDS867384 1281 - 0.637783
NA SG0909 molybdopterin biosynthesis protein Cchromosome CDS1476529 483 + 0.608696
NA SG0652 riboflavin synthasechromosome CDS1114857 471 + 0.592357
NA SG1016 nicotinate phosphoribosyltransferasechromosome CDS1679311 1209 - 0.545906
NA SG2003 putative monooxygenasechromosome CDS3459607 1218 - 0.625616
NA SG1959 hypothetical proteinchromosome CDS3368556 825 - 0.598788
NA SG0138 uroporphyrinogen decarboxylasechromosome CDS230185 1065 + 0.598122
NA SG1466 dethiobiotin synthasechromosome CDS2454298 1086 + 0.575506
NA SG2397 acetolactate synthase isozyme II large subunitchromosome CDS4105812 1647 - 0.594414
NA SG1402 anthranilate synthase component I TrpEchromosome CDS2326021 1569 - 0.599745
NA SG1439 riboflavin synthase alpha chainchromosome CDS2409833 618 + 0.533981
NA SG0904 8-amino-7-oxononanoate synthasechromosome CDS1467689 1167 + 0.66838
NA SG0920 putative molybdopterin biosynthesis protein MoeAchromosome CDS1502867 1062 - 0.630885
NA SG2366 porphobilinogen deaminasechromosome CDS4063714 963 + 0.627207
NA SG0319 hypothetical proteinchromosome CDS570324 456 + 0.585526
NA SG1621 erythronate-4-phosphate dehydrogenasechromosome CDS2776922 1134 - 0.657848
NA SG2209 DNA/pantothenate metabolism flavoproteinchromosome CDS3840902 1215 + 0.593416
NA SG0661 2-dehydropantoate 2-reductasechromosome CDS1123399 912 - 0.561404
NA SG0515 putative 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS898836 363 - 0.545455
NA SG1612 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2768043 570 - 0.612281
NA SG0656 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS1117958 1863 - 0.588298
NA SG2022 glutathione synthasechromosome CDS3485692 957 + 0.562173
NA SG2239 putative molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3895679 315 + 0.542857
NA SG0924 ribosomal protein S6 modification proteinchromosome CDS1513196 891 + 0.611672
NA SG0889 quinolinate synthase Achromosome CDS1448296 1047 + 0.593123
NA SG0487 pantothenate synthasechromosome CDS844640 855 - 0.60117
NA SG0518 3'-phosphoadenosine 5'-phosphosulfate sulfotransferasechromosome CDS903068 735 + 0.608163
NA SG0116 hypothetical proteinchromosome CDS193589 1485 + 0.560269
NA SG0421 dihydrofolate reductasechromosome CDS744343 486 + 0.565844
NA SG1153 hypothetical proteinchromosome CDS1922706 459 + 0.507625
NA SG0906 dethiobiotin synthasechromosome CDS1469605 687 + 0.62591
NA SG2367 uroporphyrinogen III synthasechromosome CDS4064673 741 + 0.601889
NA SG1784 pyridoxal phosphate biosynthetic proteinchromosome CDS3049145 732 - 0.598361
NA SG0109 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS188006 759 + 0.549407
NA SG2302 para-aminobenzoate synthase component IIchromosome CDS3955025 582 - 0.573883
NA SG1329 para-aminobenzoate synthase component Ichromosome CDS2210722 1371 - 0.623632
NA SGP1_0033 putative demethylmenaquinone methyltransferasepSG1 CDS57659 636 - 0.544025
NA SG0464 quinolinate phosphoribosyltransferasechromosome CDS800195 891 - 0.606061
NA SG1552 hypothetical proteinchromosome CDS2649940 621 + 0.62963
NA SG0488 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS845509 789 - 0.618504
NA SG0800 nicotinate-nucleotide adenylyltransferasechromosome CDS1353254 657 - 0.651446
NA SG0706 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS1187789 873 - 0.58992
NA SG1583 3-demethylubiquinone-9 3-methyltransferasechromosome CDS2717765 750 + 0.588
NA SG2395 branched-chain amino-acid aminotransferasechromosome CDS4104606 930 - 0.563441
NA SG1616 folylpolyglutamate synthasechromosome CDS2771742 1266 - 0.64455
NA SG0256 dihydroneopterin aldolasechromosome CDS471754 360 + 0.572222
NA SG2170 menaquinone biosynthesis proteinchromosome CDS3781704 486 + 0.549383
NA SG0461 dephospho-CoA kinasechromosome CDS796113 627 - 0.617225
NA SG1794 L-aspartate oxidasechromosome CDS3058756 1602 + 0.609863
NA SG2004 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3460856 1179 - 0.659033
NA SG1712 coproporphyrinogen III oxidasechromosome CDS2922561 915 + 0.598907
NA SG2019 S-adenosylmethionine synthasechromosome CDS3480266 1158 + 0.587219
NA SG0121 protoporphyrinogen oxidasechromosome CDS199334 549 + 0.555556
NA SG1447 pyridoxamine 5'-phosphate oxidasechromosome CDS2421116 651 + 0.58679
NA SG1154 thiamin biosynthesis lipoproteinchromosome CDS1923471 1050 + 0.565714
NA SG0425 pyridoxal phosphate biosynthetic proteinchromosome CDS746972 993 - 0.623364
NA SG0541 gamma-glutamylcysteine synthasechromosome CDS939415 1563 + 0.564299
NA SG2205 phosphopantetheine adenylyltransferasechromosome CDS3838014 483 + 0.587992
 
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
apbA WGLp146 hypothetical proteinchromosome CDS172523 903 - 0.198228
bioA WGLp452 hypothetical proteinchromosome CDS524770 1302 - 0.260369
bioB WGLp453 hypothetical proteinchromosome CDS526027 1170 + 0.235043
bioD WGLp456 hypothetical proteinchromosome CDS529112 684 + 0.217836
bioF WGLp454 hypothetical proteinchromosome CDS527190 1188 + 0.243266
birA WGLp513 hypothetical proteinchromosome CDS592203 768 + 0.179688
coaA WGLp514 pantothenate kinasechromosome CDS593030 798 - 0.166667
dfp WGLp402 hypothetical proteinchromosome CDS466186 1215 - 0.266667
dxs WGLp144 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS169179 1881 - 0.296651
folA WGLp022 hypothetical proteinchromosome CDS26330 489 - 0.214724
folC WGLp311 hypothetical proteinchromosome CDS367171 1287 + 0.227661
folD WGLp242 hypothetical proteinchromosome CDS285143 852 + 0.267606
folE WGLp317 GTP cyclohydrolase Ichromosome CDS373905 651 + 0.228879
folK WGLp264 hypothetical proteinchromosome CDS307583 492 + 0.21748
folP WGLp230 hypothetical proteinchromosome CDS271307 801 - 0.257179
gshA WGLp247 hypothetical proteinchromosome CDS289964 1518 + 0.208169
gshB WGLp166 glutathione synthetasechromosome CDS196754 984 - 0.237805
hemA WGLp346 hypothetical proteinchromosome CDS404202 1263 - 0.197941
hemB WGLp132 delta-aminolevulinic acid dehydratasechromosome CDS153868 975 + 0.268718
hemC WGLp240 hypothetical proteinchromosome CDS283269 876 + 0.277397
hemD WGLp241 hypothetical proteinchromosome CDS284141 738 + 0.210027
hemE WGLp508 hypothetical proteinchromosome CDS586253 1083 + 0.237304
hemF WGLp584 coproporphyrinogen III oxidasechromosome CDS655014 912 - 0.270833
hemG WGLp123 hypothetical proteinchromosome CDS135860 519 + 0.165703
hemH WGLp529 hypothetical proteinchromosome CDS612344 966 + 0.232919
hemL WGLp073 hypothetical proteinchromosome CDS78231 1308 - 0.248471
ispA WGLp145 hypothetical proteinchromosome CDS171081 903 - 0.223699
ispB WGLp478 hypothetical proteinchromosome CDS551734 972 + 0.212963
kdtB WGLp289 hypothetical proteinchromosome CDS340141 507 - 0.203156
lipA WGLp176 lipoyl synthasechromosome CDS208729 951 + 0.252366
lipB WGLp175 hypothetical proteinchromosome CDS208052 651 + 0.187404
metK WGLp316 S-adenosylmethionine synthetasechromosome CDS372580 1158 + 0.297927
nadA WGLp158 quinolinate synthetasechromosome CDS188010 1014 - 0.279093
nadC WGLp324 hypothetical proteinchromosome CDS383537 876 + 0.212329
nadE WGLp342 NAD(+) synthetasechromosome CDS400483 825 - 0.243636
panB WGLp449 hypothetical proteinchromosome CDS521860 798 - 0.260652
panC WGLp448 hypothetical proteinchromosome CDS520984 867 - 0.2203
pdxA WGLp019 hypothetical proteinchromosome CDS23625 999 + 0.271271
pdxB WGLp308 hypothetical proteinchromosome CDS364200 1137 + 0.218118
pdxH WGLp337 hypothetical proteinchromosome CDS395750 651 + 0.211982
pdxJ WGLp197 pyridoxal phosphate biosynthetic proteinchromosome CDS231927 738 + 0.249322
ribA WGLp364 GTP cyclohydrolase II proteinchromosome CDS422347 594 + 0.271044
ribB WGLp237 hypothetical proteinchromosome CDS280655 642 - 0.303738
ribD WGLp462 hypothetical proteinchromosome CDS537574 1155 + 0.274459
ribE WGLp333 riboflavin synthase subunit alphachromosome CDS393111 621 + 0.223833
ribF WGLp295 hypothetical proteinchromosome CDS347566 963 - 0.219107
ribH WGLp463 hypothetical proteinchromosome CDS538755 465 + 0.221505
serC WGLp486 phosphoserine aminotransferasechromosome CDS562335 1086 - 0.235727
thiC WGLp507 thiamine biosynthesis protein ThiCchromosome CDS584133 1815 - 0.27438
thiD WGLp318 hypothetical proteinchromosome CDS374559 819 - 0.246642
thiE WGLp506 hypothetical proteinchromosome CDS583484 648 - 0.246914
thiG WGLp505 hypothetical proteinchromosome CDS581766 765 - 0.287582
thiH WGLp504 thiamine biosynthesis protein ThiHchromosome CDS580634 1122 - 0.254011
thiL WGLp465 hypothetical proteinchromosome CDS539665 990 + 0.240404
ubiA WGLp127 hypothetical proteinchromosome CDS145749 822 + 0.19708
ubiE WGLp119 hypothetical proteinchromosome CDS129798 456 + 0.223684
ubiG WGLp444 3-demethylubiquinone-9 3-methyltransferasechromosome CDS515504 681 - 0.246696
ubiH WGLp431 hypothetical proteinchromosome CDS497548 1188 - 0.197811
ubiX WGLp314 hypothetical proteinchromosome CDS370539 582 + 0.237113
yacE WGLp193 hypothetical proteinchromosome CDS227354 627 - 0.212121
ybeN WGLp171 hypothetical proteinchromosome CDS202915 636 + 0.237421
yggW WGLp077 hypothetical proteinchromosome CDS82454 816 - 0.180147
ygiG WGLp472 hypothetical proteinchromosome CDS547487 360 + 0.186111
yigC WGLp121 hypothetical proteinchromosome CDS132576 1470 + 0.285034
yleB WGLp474 hypothetical proteinchromosome CDS548679 1182 - 0.225888
 
Yersinia enterocolitica subsp. enterocolitica 8081, 8081
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YE1365 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS1520242 909 + 0.458746
NA YE4159 putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS4555157 981 + 0.523955
NA YE3305 hypothetical proteinchromosome CDS3605181 810 - 0.477778
NA YE0265 hypothetical proteinchromosome CDS303638 1497 + 0.487642
NA YE3399 putative 5-formyltetrahydrofolate cyclo-ligase-family proteinchromosome CDS3712268 597 + 0.489112
NA YE0307 putative transmembrane transport proteinchromosome CDS362987 1656 - 0.471618
NA YE3583 putative iron ABC transporter, ATP-binding proteinchromosome CDS3898753 759 - 0.428195
NA YE3585 putative iron transport permeasechromosome CDS3900505 960 - 0.501042
NA YE3438 putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS3750831 1131 + 0.500442
NA YE2112 putative mandelate racemase / muconate lactonizing proteinchromosome CDS2313967 972 - 0.505144
NA YE3584 putative iron transport permeasechromosome CDS3899508 1008 - 0.462302
NA YE2669 putative ketopantoate reductasechromosome CDS2893724 891 - 0.575758
NA YE1460 putative siderophore ABC transporter,ATP-binding subunitchromosome CDS1640171 789 + 0.498099
NA YE0685 hypothetical proteinchromosome CDS790279 621 - 0.47504
NA YE4027 putative thiamine pyrophosphate-dependent proteinchromosome CDS4385072 1941 - 0.48068
NA YE2659 extracellular solute-binding proteinchromosome CDS2877238 1032 + 0.502907
NA YE1459 putative FecCD-family membrane transport proteinchromosome CDS1639092 1083 + 0.536473
adgA YE1038 putative glutamine-dependent NADchromosome CDS1160791 1623 + 0.497844
ads YE3045 putative FolD bifunctional proteinchromosome CDS3312100 882 + 0.5
apbA YE3149 2-dehydropantoate 2-reductasechromosome CDS3423990 912 + 0.496711
apbE YE3214 thiamine biosynthesis lipoproteinchromosome CDS3499602 1023 - 0.462366
b0025 YE0615 riboflavin biosynthesis protein (includes: riboflavin kinase and FMN adenyltransferase)chromosome CDS706615 939 + 0.489883
b0420 YE3155 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS3428582 1860 + 0.500538
b2688 YE0838 glutamate--cysteine ligasechromosome CDS964870 1560 + 0.480128
b4040 YE3858 4-hydroxybenzoate octaprenyltransferasechromosome CDS4208400 867 - 0.480969
b4390 YE0580 transcriptional regulator NadRchromosome CDS664901 1284 + 0.469626
bcsE YE4077 hypothetical proteinchromosome CDS4454789 1560 + 0.503205
bioA YE2908 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS3160948 1278 + 0.526604
bioB YE2907 biotin synthasechromosome CDS3159796 1053 - 0.508072
bioD YE2024 putative dethiobiotin synthetasechromosome CDS2216044 669 + 0.442451
bioD YE2904 dethiobiotin synthetasechromosome CDS3157143 648 - 0.529321
bioF YE2906 8-amino-7-oxononanoate synthasechromosome CDS3158645 1152 - 0.552083
bioR YE0275 bifunctional protein BirAchromosome CDS320743 960 + 0.432292
bisA YE2899 molybdenum cofactor biosynthesis protein Achromosome CDS3150659 981 - 0.504587
bisB YE2828 molybdopterin biosynthesis proteinchromosome CDS3075244 1236 + 0.4911
btuC YE2195 putative vitamin B12 transport system permease proteinchromosome CDS2404955 1008 - 0.49504
btuD YE2193 putative vitamin B12 transport ATP-binding proteinchromosome CDS2403548 762 - 0.468504
btuR YE2205 cob(I)alamin adenosyltransferasechromosome CDS2415949 591 + 0.467005
btuR YE4035 cob(i)alamin adenosyltransferasechromosome CDS4397017 591 - 0.480541
budB YE4017 acetolactate synthase, catabolicchromosome CDS4373792 1680 + 0.502976
cbiA YE2725 cobyrinic acid A,C-diamide synthasechromosome CDS2960425 1404 - 0.543447
cbiB YE2724 hypothetical proteinchromosome CDS2959472 957 - 0.567398
cbiC YE2723 precorrin-8X methylmutasechromosome CDS2958811 648 - 0.537037
cbiD YE2722 hypothetical proteinchromosome CDS2957648 1167 - 0.556127
cbiE YE2721 decarboxylating precorrin-6Y C5,15-methyltransferasechromosome CDS2957049 603 - 0.527363
cbiF YE2719a precorrin-4 C11-methyltransferasechromosome CDS2955706 792 - 0.555556
cbiG YE2719 hypothetical proteinchromosome CDS2954670 1056 - 0.558712
cbiH YE2718 precorrin-3 C17-methyltransferasechromosome CDS2953945 726 - 0.524793
cbiJ YE2717 precorrin-6X reductasechromosome CDS2953121 828 - 0.551932
cbiL YE2715 precorrin-2 C20-methyltransferasechromosome CDS2951617 714 - 0.543417
cbiM YE2714 hypothetical proteinchromosome CDS2950709 732 - 0.51776
cbiP YE2711 cobyric acid synthasechromosome CDS2947385 1539 - 0.51332
cbiT YE2720 precorrin-8W decarboxylasechromosome CDS2956490 570 - 0.501754
cel YE0417 octaprenyl-diphosphate synthasechromosome CDS486490 972 - 0.483539
chlA3 YE2898 molybdenum cofactor biosynthesis protein Cchromosome CDS3150148 480 - 0.495833
chlA4 YE2897 molybdopterin [mpt] converting factor, subunit 1chromosome CDS3149906 246 - 0.52439
chlA5 YE2896 molybdopterin [mpt] converting factor, subunit 2chromosome CDS3149451 456 - 0.524123
chlB YE0017 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS23718 600 - 0.428333
chlG YE0605 molybdopterin biosynthesis proteinchromosome CDS694381 588 + 0.489796
chlN YE2829 molybdopterin biosynthesis proteinchromosome CDS3076519 786 + 0.482188
citG YE2648 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthasechromosome CDS2865158 969 - 0.539732
citX YE2649 putative apo-citrate lyase phosphoribosyl-dephospho-CoA transferasechromosome CDS2866131 549 - 0.551913
coaA YE0276 pantothenate kinasechromosome CDS321742 951 - 0.419558
coaD YE0067 phosphopantetheine adenylyltransferasechromosome CDS75792 480 - 0.475
cobA YE4038 uroporphyrin-III C-methyltransferasechromosome CDS4400906 783 + 0.455939
cobA YE2748 putative uroporphyrin-III C-methyltransferasechromosome CDS2981698 768 + 0.53125
cobB YE1714 putative Sir2 family proteinchromosome CDS1912439 837 + 0.504182
cobS YE2709 cobalamin [5'-phosphate] synthasechromosome CDS2946100 747 - 0.556894
cobT YE2707 nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferasechromosome CDS2944349 1059 - 0.533522
cobU YE2710 cobinamide kinase and guanylyltransferasechromosome CDS2946843 546 - 0.53663
cyoE YE3145 protoheme IX farnesyltransferasechromosome CDS3420676 891 + 0.460157
cysD YE0762 sulfate adenylyltransferase subunit 2chromosome CDS888307 909 + 0.514852
cysG YE3968 siroheme synthasechromosome CDS4312558 1419 + 0.525018
cysG YE0761 siroheme synthasechromosome CDS886878 1419 + 0.554616
cysH YE0757 phosphoadenosine phosphosulfate reductasechromosome CDS883782 735 + 0.506122
dedC YE1312 putative FolC bifunctional proteinchromosome CDS1459015 1269 + 0.514578
dfp YE0062 DNA/pantothenate metabolism flavoproteinchromosome CDS72017 1188 - 0.510943
dhpS YE0429 dihydropteroate synthasechromosome CDS497847 834 + 0.491607
fadI YE0266 NAD(P)H-flavin reductasechromosome CDS305189 702 + 0.48433
fepC YE3621 iron-siderophore transport system, ATP-binding componentchromosome CDS3947905 849 + 0.526502
fepD YE3619 ferric enterobactin transport system permease proteinchromosome CDS3945828 1071 + 0.54155
fepG YE3620 iron-siderophore transport system, membrane permease componentchromosome CDS3946895 1044 + 0.539272
fhuB YE0732 ferrichrome transport system permease protein FhuBchromosome CDS849378 1998 + 0.52002
fhuC YE0730 ferrichrome transport ATP-binding protein FhuCchromosome CDS847658 795 + 0.537107
folA YE0626 dihydrofolate reductasechromosome CDS720773 462 + 0.497835
folB YE3679 putative dihydroneopterin aldolasechromosome CDS4014278 360 - 0.488889
folE YE2818 GTP cyclohydrolase Ichromosome CDS3062705 663 - 0.466063
folK YE0722 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinasechromosome CDS837102 480 - 0.5375
gsa YE0734 glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS853456 1281 - 0.502732
gsh-II YE3427 glutathione synthetasechromosome CDS3741574 954 + 0.504193
hemA YE2432 glutamyl-tRNA reductasechromosome CDS2622588 1263 - 0.511481
hemB YE0263 delta-aminolevulinic acid dehydratasechromosome CDS301770 1023 + 0.480938
hemC YE0187 porphobilinogen deaminasechromosome CDS222463 942 - 0.516985
hemD YE0186 uroporphyrinogen-III synthasechromosome CDS221720 747 - 0.514056
hemE YE0297 uroporphyrinogen decarboxylasechromosome CDS347286 1068 + 0.504682
hemF YE1168 coproporphyrinogen III oxidase, aerobic HemFchromosome CDS1307152 927 - 0.495146
hemH YE3088 ferrochelatasechromosome CDS3358610 969 - 0.470588
hemN YE0335 putative coproporphyrinogen III oxidasechromosome CDS398005 1314 - 0.500761
hemN YE0024 oxygen-independent coproporphyrinogen III oxidasechromosome CDS32467 1374 + 0.458515
hemU YE0328 hemin transport system permease protein HmuUchromosome CDS391312 1005 - 0.555224
hemV YE0327 hemin transport system ATP-binding proteinchromosome CDS390519 801 - 0.54432
hemY YE0184 putative protoheme IX biogenesis proteinchromosome CDS219361 1200 - 0.523333
hslI YE2098 D-lactate dehydrogenasechromosome CDS2296932 993 + 0.472306
htrP YE3669 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS4001890 654 - 0.503058
ilvB YE2060 putative acetolactate synthase large subunitchromosome CDS2254911 1683 + 0.507427
ilvC YE0155 ketol-acid reductoisomerasechromosome CDS184071 1479 + 0.48952
ilvE YE0150 branched-chain amino acid aminotransferasechromosome CDS176815 927 + 0.509169
ilvG YE0148 acetolactate synthase isozyme II large subunitchromosome CDS174892 1647 + 0.523983
ilvI YE0658 acetolactate synthase isozyme III large subunitchromosome CDS761712 1728 + 0.499421
ipdC YE1222 indole-3-pyruvate decarboxylasechromosome CDS1362066 1665 + 0.509309
irp9 YE2612 putative salicylate synthetasechromosome CDS2812607 1305 - 0.555556
ispA YE3154 geranyltranstransferasechromosome CDS3427608 921 + 0.523344
kbl YE0073 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS82105 1212 + 0.489274
lip YE3008 lipoic acid synthetasechromosome CDS3279468 966 + 0.485507
lipB YE3007 lipoate-protein ligase Bchromosome CDS3278566 714 + 0.501401
lplA YE2184 putative lipoate-protein ligase Achromosome CDS2393419 1017 - 0.480826
menA YE0103 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS112342 855 - 0.502924
menC YE1378 putative O-succinylbenzoate-CoA synthasechromosome CDS1537214 972 + 0.559671
menD YE1375 menaquinone biosynthesis proteinchromosome CDS1533849 1674 + 0.553763
menF YE1373 menaquinone-specific isochorismate synthasechromosome CDS1532262 1359 + 0.491538
menG YE0102 S-adenosylmethionine:2-demethylmenaquinone methyltransferasechromosome CDS111726 486 - 0.454733
metK YE3421 S-adenosylmethionine synthetasechromosome CDS3736915 1155 + 0.490909
mobB YE0016 probable molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS23194 528 - 0.407197
nadA YE2928 quinolinate synthetase Achromosome CDS3183947 1062 - 0.510358
nadB YE1009 L-aspartate oxidasechromosome CDS1128691 1638 - 0.493284
nadC YE0691 nicotinate-nucleotide pyrophosphorylasechromosome CDS795861 909 - 0.49615
nadD YE2999 putative nicotinate-nucleotide adenylyltransferasechromosome CDS3270595 663 + 0.484163
pabA YE3958 para-aminobenzoate synthase glutamine amidotransferase component IIchromosome CDS4299826 576 - 0.487847
pabB YE1781 para-aminobenzoate synthase component Ichromosome CDS1976289 1371 - 0.495988
pabC YE1638 4-amino-4-deoxychorismate lyasechromosome CDS1843200 825 + 0.506667
panB YE0720 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS836068 801 - 0.514357
panC YE0719 pantoate--beta-alanine ligasechromosome CDS835040 855 - 0.505263
panD YE0718 aspartate 1-decarboxylase precursorchromosome CDS834502 381 - 0.485564
panF YE3814 sodium/pantothenate symporterchromosome CDS4160685 1455 + 0.514777
pdxA YE0631 pyridoxal phosphate biosynthetic proteinchromosome CDS723477 996 - 0.488956
pdxH YE2140 pyridoxamine 5'-phosphate oxidasechromosome CDS2341125 654 - 0.492355
pdxJ YE1020 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS1139955 732 + 0.509563
pdxY YE2138 pyridoxamine kinasechromosome CDS2338666 861 - 0.478513
pncB YE1565 putative nicotinate phosphoribosyltransferasechromosome CDS1761052 1206 - 0.460199
pnuC YE2927 intergral membrane NMN transport protein PnuCchromosome CDS3182971 729 - 0.465021
poxB YE1507 pyruvate dehydrogenasechromosome CDS1682410 1722 - 0.511034
pufX YE1394 3-demethylubiquinone-9 3-methyltransferasechromosome CDS1558895 729 - 0.486968
putP YE1934 proline permeasechromosome CDS2113011 1485 + 0.490236
ribA YE1965 GTP cyclohydrolase IIchromosome CDS2146643 591 - 0.492386
ribC YE2162 riboflavin synthase alpha chainchromosome CDS2363153 651 - 0.456221
ribD YE3161 riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductachromosome CDS3433556 1110 - 0.541441
ribE YE3160 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS3432951 471 - 0.47983
serC YE1537 phosphoserine aminotransferasechromosome CDS1724940 1086 + 0.492634
sfuA YE1241 iron(III)-binding periplasmic proteinchromosome CDS1382354 1017 - 0.481809
sfuB YE1240 iron(III)-transport system permeasechromosome CDS1380681 1587 - 0.52426
thiC YE0293 thiamine biosynthesis protein ThiCchromosome CDS343427 1887 - 0.503445
thiD YE1088 putative phosphomethylpyrimidine kinasechromosome CDS1219890 801 + 0.534332
thiE YE0292 thiamine-phosphate pyrophosphorylasechromosome CDS342760 612 - 0.526144
thiF YE0291 thiamine biosynthesis proteinchromosome CDS341994 783 - 0.526181
thiH YE0289 thiamine biosynthesis protein ThiHchromosome CDS339869 1131 - 0.5084
thiI YE3151 thiamine biosynthesis proteinchromosome CDS3425622 1452 - 0.46832
thiL YE3158 thiamine-monophosphate kinasechromosome CDS3431440 990 - 0.5
thiM YE3599 hydroxyethylthiazole kinasechromosome CDS3920539 783 - 0.555556
thiP YE0641 thiamine transport system permease proteinchromosome CDS737324 1548 - 0.530362
thiS YE0290A thiamine biosynthesis proteinchromosome CDS341782 216 - 0.49537
trpE YE2209 anthranilate synthase component Ichromosome CDS2420029 1563 + 0.53167
trpG YE2210 anthranilate synthase component IIchromosome CDS2421606 591 + 0.527919
ubiC YE3859 putative chorismate--pyruvate lyasechromosome CDS4209291 507 - 0.524655
ubiE YE0256 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS295958 756 + 0.457672
ubiF YE2984 putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS3253760 1182 - 0.51692
ubiH YE3395 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3707997 1170 - 0.545299
ubiX YE1317 probable 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS1463680 573 + 0.488656
visC YE3394 putative monooxygenasechromosome CDS3706695 1215 - 0.535802
ygcM YE0754 putative 6-pyruvoyl tetrahydrobiopterin synthase family proteinchromosome CDS879523 360 - 0.480556
 
Yersinia pestis Antiqua, Antiqua
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPA_0121 acetolactate synthase isozyme II large subunitchromosome CDS150912 1647 + 0.532483
NA YPA_0253 S-adenosylmethionine:2-demethylmenaquinone methyltransferasechromosome CDS293602 486 - 0.475309
NA YPA_3311 siroheme synthasechromosome CDS3652595 1413 + 0.530078
NA YPA_2220 coproporphyrinogen III oxidase, aerobic HemFchromosome CDS2490102 930 + 0.533333
NA YPA_2926 nicotinate-nucleotide pyrophosphorylase (carboxylating)chromosome CDS3260820 948 + 0.483122
NA YPA_2674 thiamine-monophosphate kinasechromosome CDS2974647 990 - 0.489899
NA YPA_0123 branched-chain amino acid aminotransferasechromosome CDS152835 927 + 0.515642
NA YPA_1059 8-amino-7-oxononanoate synthasechromosome CDS1211066 1152 + 0.580729
NA YPA_3438 NAD(P)H-flavin reductasechromosome CDS3843234 702 - 0.487179
NA YPA_0051 dihydropteroate synthasechromosome CDS67150 834 - 0.476019
NA YPA_0929 3-demethylubiquinone-9 3-methyltransferasechromosome CDS1072463 729 - 0.499314
NA YPA_3614 ThiS, thiamine-biosynthesischromosome CDS4051184 216 + 0.49537
NA YPA_0335 S-adenosylmethionine synthetasechromosome CDS393465 1155 - 0.497835
NA YPA_2901 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS3230901 480 + 0.529167
NA YPA_0354 putative 5-formyltetrahydrofolate cyclo-ligase-family proteinchromosome CDS415955 597 - 0.517588
NA YPA_0647 pyruvate dehydrogenase (cytochrome)chromosome CDS731794 1722 - 0.522648
NA YPA_3974 putative chorismate--pyruvate lyasechromosome CDS4476337 525 - 0.508571
NA YPA_1145 para-aminobenzoate synthase component Ichromosome CDS1298295 1377 - 0.511256
NA YPA_2889 glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS3214997 1281 + 0.508977
NA YPA_0068 hypothetical proteinchromosome CDS82964 264 + 0.409091
NA YPA_2903 pantoate--beta-alanine ligasechromosome CDS3232534 855 + 0.530994
NA YPA_3494 DNA/pantothenate metabolism flavoproteinchromosome CDS3897492 1332 + 0.476727
NA YPA_0791 molybdopterin biosynthesis proteinchromosome CDS909946 1275 - 0.499608
NA YPA_0319 putative oxygen-independent coproporphyrinogen III oxidasechromosome CDS380853 1143 - 0.492563
NA YPA_0358 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS419629 1179 + 0.550466
NA YPA_2864 Siroheme synthasechromosome CDS3187766 540 - 0.546296
NA YPA_3973 4-hydroxybenzoate octaprenyltransferasechromosome CDS4475305 867 - 0.484429
NA YPA_3560 acetolactate synthase isozyme III large subunitchromosome CDS3977354 1728 - 0.497685
NA YPA_1358 hypothetical proteinchromosome CDS1528987 1605 - 0.464174
NA YPA_1922 4-amino-4-deoxychorismate lyasechromosome CDS2156784 807 - 0.488228
NA YPA_2662 protoheme IX farnesyltransferasechromosome CDS2963209 888 + 0.46509
NA YPA_0254 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS294229 930 - 0.488172
NA YPA_2776 siroheme synthasechromosome CDS3096756 771 + 0.562905
NA YPA_2017 naphthoate synthasechromosome CDS2261317 858 - 0.519814
NA YPA_1400 glutamyl-tRNA reductasechromosome CDS1572884 1317 + 0.501898
NA YPA_3521 oxygen-independent coproporphyrinogen III oxidasechromosome CDS3929516 1374 - 0.477438
NA YPA_0630 FecCD transport family proteinchromosome CDS718395 903 + 0.516058
NA YPA_1572 cob(I)alamin adenosyltransferasechromosome CDS1759601 645 - 0.496124
NA YPA_2777 sulfate adenylyltransferase subunit 2chromosome CDS3097537 909 + 0.491749
NA YPA_0790 molybdopterin biosynthesis proteinchromosome CDS909174 771 - 0.496757
NA YPA_0132 ketol-acid reductoisomerasechromosome CDS161590 1479 + 0.503043
NA YPA_1058 biotin synthasechromosome CDS1210029 1038 + 0.510597
NA YPA_3300 para-aminobenzoate synthase glutamine amidotransferase component IIchromosome CDS3636793 576 - 0.520833
NA YPA_1294 putative salicylate synthetasechromosome CDS1451444 1305 + 0.55249
NA YPA_3575 thiamine transport ATP-binding proteinchromosome CDS3998752 711 + 0.540084
NA YPA_3428 bifunctional protein BirAchromosome CDS3826546 960 - 0.40625
NA YPA_1678 D-lactate dehydrogenasechromosome CDS1883765 993 + 0.460222
NA YPA_2020 menaquinone-specific isochorismate synthasechromosome CDS2264934 1374 - 0.5131
NA YPA_2500 lipoate-protein ligase Bchromosome CDS2789965 702 + 0.490029
NA YPA_2902 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS3231649 798 + 0.521303
NA YPA_2565 putative FolD bifunctional proteinchromosome CDS2858239 867 + 0.514418
NA YPA_4067 riboflavin biosynthesis protein: riboflavin kinase and FMN adenyltransferasechromosome CDS4582002 939 + 0.500533
NA YPA_3006 putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS3346573 981 - 0.511723
NA YPA_2892 ferrichrome transport ATP-binding protein FhuCchromosome CDS3219733 795 - 0.543396
NA YPA_3669 sodium/pantothenate symporterchromosome CDS4111034 1455 - 0.527148
NA YPA_2080 putative D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS2333001 1188 - 0.537037
NA YPA_0680 phosphoserine aminotransferasechromosome CDS778292 1086 + 0.474217
NA YPA_2075 putative FolC bifunctional proteinchromosome CDS2327423 1305 - 0.531034
NA YPA_0359 putative monooxygenasechromosome CDS420857 1344 + 0.539435
NA YPA_3529 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS3939582 588 + 0.435374
NA YPA_0170 putative uroporphyrin-III C-methyltransferasechromosome CDS204900 1125 - 0.506667
NA YPA_3441 delta-aminolevulinic acid dehydratasechromosome CDS3846332 1023 - 0.477028
NA YPA_3613 thiamine biosynthesis protein ThiFchromosome CDS4050390 798 + 0.5401
NA YPA_2677 riboflavin biosynthesis protein RibD: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductasechromosome CDS2976920 1110 - 0.527928
NA YPA_3995 putative coproporphyrinogen III oxidasechromosome CDS4504871 1314 + 0.509893
NA YPA_0171 uroporphyrinogen-III synthasechromosome CDS206055 750 - 0.512
NA YPA_2369 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS2657094 732 - 0.495902
NA YPA_0605 quinolinate synthetase Achromosome CDS690429 1062 + 0.507533
NA YPA_2028 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS2273550 951 - 0.480547
NA YPA_2867 Phosphoadenylyl-sulfate reductase (thioredoxin)chromosome CDS3189921 285 - 0.494737
NA YPA_0827 putative iron-siderophore transport system, ATP-binding componentchromosome CDS956628 849 - 0.485277
NA YPA_0169 putative protoheme IX biogenesis proteinchromosome CDS203677 1221 - 0.525798
NA YPA_0243 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS285284 756 + 0.448413
NA YPA_2444 L-aspartate oxidasechromosome CDS2726591 1638 - 0.484127
NA YPA_1769 puative vitamin B12 transport system permease proteinchromosome CDS1987134 1023 - 0.485826
NA YPA_2671 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS2971459 1860 + 0.489247
NA YPA_1758 putative lipoate-protein ligase Achromosome CDS1976081 1017 - 0.450344
NA YPA_3459 transferasechromosome CDS3865329 714 + 0.540616
NA YPA_4079 dihydrofolate reductasechromosome CDS4597336 483 + 0.486542
NA YPA_1767 putative vitamin B12 transport ATP-binding proteinchromosome CDS1985727 759 - 0.470356
NA YPA_2016 putative O-succinylbenzoate-CoA synthasechromosome CDS2260346 972 - 0.569959
NA YPA_1629 putative dethiobiotin synthetasechromosome CDS1823846 669 + 0.431988
NA YPA_2071 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2323411 573 - 0.467714
NA YPA_3483 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS3887763 1212 - 0.50165
NA YPA_1581 GTP cyclohydrolase IIchromosome CDS1771355 603 - 0.466003
NA YPA_0497 hypothetical proteinchromosome CDS580698 828 + 0.4843
NA YPA_3430 protoporphyrinogen oxidasechromosome CDS3834685 534 - 0.428839
NA YPA_CD0079 Yop regulatorpCD CDS24551 288 + 0.46875
NA YPA_2609 cdp-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS2904056 990 - 0.374747
NA YPA_1061 dethiobiotin synthetasechromosome CDS1212997 723 + 0.542185
NA YPA_0708 putative nicotinate phosphoribosyltransferasechromosome CDS814242 1221 - 0.473382
NA YPA_3840 transcriptional regulator NadRchromosome CDS4325434 1272 - 0.488208
NA YPA_3988 hypothetical proteinchromosome CDS4497485 1062 + 0.490584
NA YPA_2476 putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS2763304 1182 - 0.534687
NA YPA_3607 uroporphyrinogen decarboxylasechromosome CDS4043866 1068 - 0.512172
NA YPA_2871 putative 6-pyruvoyl tetrahydrobiopterin synthase family proteinchromosome CDS3194587 360 + 0.475
NA YPA_3612 thiamine-phosphate pyrophosphorylasechromosome CDS4049726 675 + 0.533333
NA YPA_0063 octaprenyl-diphosphate synthasechromosome CDS78395 972 + 0.489712
NA YPA_2904 aspartate 1-decarboxylase precursorchromosome CDS3233799 381 + 0.47769
NA YPA_2670 geranyltranstransferasechromosome CDS2970383 921 + 0.505972
NA YPA_2490 putative nicotinate-nucleotide adenylyltransferasechromosome CDS2779685 663 + 0.490196
NA YPA_1363 putative coenzyme synthetasechromosome CDS1534434 1287 + 0.520591
NA YPA_3489 phosphopantetheine adenylyltransferasechromosome CDS3894689 480 + 0.4625
NA YPA_3616 thiamine biosynthesis protein ThiHchromosome CDS4052209 1131 + 0.501326
NA YPA_2676 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS2976314 471 - 0.475584
NA YPA_3615 thiamine biosynthesis protein ThiGchromosome CDS4051401 816 + 0.539216
NA YPA_1029 putative siderophore ABC transporter, ATP-binding subunitchromosome CDS1181055 789 + 0.504436
NA YPA_1736 riboflavin synthase alpha chainchromosome CDS1947657 657 - 0.450533
NA YPA_3427 pantothenate kinasechromosome CDS3825561 951 + 0.398528
NA YPA_1714 pyridoxamine kinasechromosome CDS1921973 861 - 0.502904
NA YPA_2665 2-dehydropantoate 2-reductasechromosome CDS2966791 912 + 0.464912
NA YPA_1068 molybdopterin (mpt) converting factor, subunit 1chromosome CDS1221366 246 + 0.528455
NA YPA_1069 molybdopterin (mpt) converting factor, subunit 2chromosome CDS1221611 456 + 0.541667
NA YPA_3611 thiamine biosynthesis protein ThiCchromosome CDS4047694 2046 + 0.518084
NA YPA_3439 hypothetical proteinchromosome CDS3843990 1521 - 0.487837
NA YPA_2724 thiamine biosynthesis lipoproteinchromosome CDS3031272 1080 - 0.482407
NA YPA_4087 pyridoxal phosphate biosynthetic proteinchromosome CDS4602013 1005 - 0.499502
NA YPA_3530 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS3940169 531 + 0.40678
NA YPA_2603 hypothetical proteinchromosome CDS2898657 1284 - 0.352804
NA YPA_1057 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS1208650 1281 - 0.533958
NA YPA_0800 GTP cyclohydrolase Ichromosome CDS922496 705 + 0.452482
NA YPA_2167 hypothetical proteinchromosome CDS2431431 477 - 0.48847
NA YPA_4058 molybdopterin biosynthesis proteinchromosome CDS4569682 588 + 0.45068
NA YPA_1568 anthranilate synthase component Ichromosome CDS1754561 1566 - 0.505109
NA YPA_0330 glutathione synthetasechromosome CDS389987 960 - 0.490625
NA YPA_2610 ferrochelatasechromosome CDS2905643 963 - 0.457944
NA YPA_1567 anthranilate synthase component IIchromosome CDS1753983 579 - 0.519862
NA YPA_2019 menaquinone biosynthesis proteinchromosome CDS2263003 1704 - 0.569836
NA YPA_3142 putative dihydroneopterin aldolasechromosome CDS3487351 360 - 0.5
NA YPA_2868 hypothetical proteinchromosome CDS3190180 468 - 0.50641
NA YPA_0606 intergral membrane NMN transport protein PnuCchromosome CDS691612 726 + 0.461433
NA YPA_3133 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3474685 654 - 0.524465
NA YPA_0631 putative transport ATP-binding proteinchromosome CDS719294 786 + 0.521628
NA YPA_0172 porphobilinogen deaminasechromosome CDS206801 942 - 0.547771
NA YPA_0561 putative permeasechromosome CDS646977 1485 - 0.486869
NA YPA_0353 D-3-phosphoglycerate dehydrogenasechromosome CDS414449 1242 + 0.488728
NA YPA_2501 lipoic acid synthetasechromosome CDS2790859 966 + 0.501035
NA YPA_2843 glutamate--cysteine ligasechromosome CDS3169314 1599 + 0.481551
NA YPA_1066 molybdenum cofactor biosynthesis protein Achromosome CDS1219764 1026 + 0.491228
NA YPA_2931 hypothetical proteinchromosome CDS3266927 621 + 0.470209
NA YPA_2299 putative phosphomethylpyrimidine kinasechromosome CDS2579691 801 - 0.556804
NA YPA_1067 molybdenum cofactor biosynthesis protein Cchromosome CDS1220890 480 + 0.533333
NA YPA_3366 putative integral membrane efflux proteinchromosome CDS3729947 1557 + 0.48298
 
Yersinia pestis CO92, CO92
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPO2536 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS2846500 951 - 0.480547
NA YPO3373 6-pyruvoyl tetrahydrobiopterin synthase family proteinchromosome CDS3762094 360 + 0.475
NA YPO1345 putative transport ATP-binding proteinchromosome CDS1509457 786 + 0.521628
NA YPO4078 2-hydroxyacid dehydrogenasechromosome CDS4597877 981 + 0.511723
NA YPO1603 4-amino-4-deoxychorismate lyasechromosome CDS1826766 807 + 0.488228
NA YPO3518 hypothetical proteinchromosome CDS3927040 264 + 0.409091
NA YPO0082 hypothetical proteinchromosome CDS93119 714 - 0.540616
NA YPO3769 hypothetical proteinchromosome CDS4233103 1497 - 0.485638
NA YPO1533 putative iron-siderophore transport system, ATP-binding componentchromosome CDS1744711 849 - 0.485277
NA YPO0286 coproporphyrinogen III oxidasechromosome CDS286662 1314 - 0.509893
NA YPO2293 acetolactate synthase large subunitchromosome CDS2578383 1683 + 0.498515
NA YPO1773 para-aminobenzoate synthase component Ichromosome CDS2019159 1377 - 0.511256
NA YPO1083 putative permeasechromosome CDS1230242 1485 - 0.486869
NA YPO0522 thiamine-binding periplasmic proteinchromosome CDS565994 993 - 0.498489
NA YPO1008 putative integral membrane efflux proteinchromosome CDS1137111 1557 + 0.48298
NA YPO1026 hypothetical proteinchromosome CDS1166617 828 + 0.4843
NA YPO3910 putative vitamin B12 receptor proteinchromosome CDS4391024 1878 - 0.468584
NA YPO0293 hypothetical proteinchromosome CDS294300 1062 - 0.490584
NA YPO0946 coproporphyrinogen III oxidasechromosome CDS1036159 1131 + 0.489832
NA YPO1981 putative coenzyme synthetasechromosome CDS2249435 1287 + 0.520591
NA YPO1312 putative siderophore ABC transporter, ATP-binding subunitchromosome CDS1474955 789 + 0.504436
NA YPO0913 putative 5-formyltetrahydrofolate cyclo-ligase-family proteinchromosome CDS1002301 597 + 0.517588
NA YPO1976 hypothetical proteinchromosome CDS2243988 1977 - 0.468892
NA YPO1288 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS1445988 966 - 0.600414
apbA YPO3171 2-dehydropantoate 2-reductasechromosome CDS3535121 912 + 0.464912
apbE YPO3234 thiamine biosynthesis lipoproteinchromosome CDS3599594 1023 - 0.479961
bioA YPO1150 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS1295706 1269 - 0.531127
bioB YPO1151 biotin synthasechromosome CDS1297073 1038 + 0.510597
bioD YPO1154 dithiobiotin synthetasechromosome CDS1300041 723 + 0.542185
bioD YPO2269 putative dethiobiotin synthetasechromosome CDS2551894 669 + 0.431988
bioF YPO1152 8-amino-7-oxononanoate synthasechromosome CDS1298110 1152 + 0.580729
birA YPO3759 biotin--protein ligasechromosome CDS4215668 960 - 0.40625
btuC YPO2425 vtamin B12-transporter permeasechromosome CDS2725750 1008 - 0.484127
btuD YPO2423 vitamin B12-transporter ATPasechromosome CDS2724343 762 - 0.469816
btuR YPO2214 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS2487649 591 - 0.497462
coaA YPO3758 pantothenate kinasechromosome CDS4214683 951 + 0.398528
coaD YPO0053 phosphopantetheine adenylyltransferasechromosome CDS63993 480 - 0.4625
coaE YPO3430 dephospho-CoA kinasechromosome CDS3834478 621 + 0.470209
cobT YPMT1.87 porphyrin biosynthetic proteinpMT1 CDS89291 2367 + 0.52049
cysD YPO3366 sulfate adenylyltransferase subunit 2chromosome CDS3753475 909 - 0.491749
cysG YPO0158 siroheme synthasechromosome CDS172153 1413 - 0.530078
cysG YPO3367 siroheme synthasechromosome CDS3754394 1419 - 0.55673
ddhD YPO3116 CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS3472384 990 - 0.374747
dfp YPO0048 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS60338 1218 - 0.481117
dxs YPO3177 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS3539789 1860 + 0.489247
fadI YPO3768 NAD(P)H-flavin reductasechromosome CDS4232347 702 - 0.487179
fhuC YPO3392 ferrichrome transport ATP-binding protein FhuCchromosome CDS3787285 795 - 0.543396
folA YPO0486 dihydrofolate reductasechromosome CDS519099 483 + 0.486542
folB YPO0648 putative dihydroneopterin aldolasechromosome CDS705730 360 + 0.5
folC YPO2769 putative FolC bifunctional proteinchromosome CDS3103256 1305 + 0.531034
folD YPO2824 putative FolD bifunctional proteinchromosome CDS3151967 867 + 0.514418
folE YPO1505 GTP cyclohydrolase Ichromosome CDS1708674 663 + 0.453997
folK YPO3400 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS3798453 480 + 0.529167
folP YPO3501 dihydropteroate synthasechromosome CDS3911226 834 - 0.476019
gshA YPO3301 glutamate--cysteine ligasechromosome CDS3679377 1560 - 0.482051
gshB YPO0935 glutathione synthetasechromosome CDS1027196 960 + 0.491667
hemA YPO2016 glutamyl-tRNA reductasechromosome CDS2287940 1263 + 0.502771
hemB YPO3771 delta-aminolevulinic acid dehydratasechromosome CDS4235445 1023 - 0.477028
hemC YPO3849 porphobilinogen deaminasechromosome CDS4319664 942 + 0.547771
hemD YPO3850 uroporphyrinogen-III synthetasechromosome CDS4320602 750 + 0.512
hemE YPO3734 uroporphyrinogen decarboxylasechromosome CDS4186774 1068 - 0.512172
hemF YPO3032 coproporphyrinogen III oxidasechromosome CDS3385073 930 + 0.533333
hemG YPO3761 protoporphyrinogen oxidasechromosome CDS4223798 534 - 0.428839
hemH YPO3117 ferrochelatasechromosome CDS3473971 963 - 0.457944
hemL YPO3389 glutamate-1-semialdehyde aminotransferasechromosome CDS3782549 1281 + 0.508977
hemN YPO0021 coproporphyrinogen III oxidasechromosome CDS28982 1374 + 0.477438
hemX YPO3851 putative uroporphyrin-III C-methyltransferasechromosome CDS4321382 1125 + 0.506667
hemY YPO3852 putative protoheme IX biogenesis proteinchromosome CDS4322509 1221 + 0.525798
ilvC YPO3888 ketol-acid reductoisomerasechromosome CDS4362378 1479 - 0.503043
ilvE YPO3899 branched-chain amino acid aminotransferasechromosome CDS4372226 927 - 0.515642
ilvG YPO3901 acetolactate synthase II large subunitchromosome CDS4373429 1647 - 0.532483
ilvI YPO0539 acetolactate synthase III large subunitchromosome CDS584017 1728 + 0.497685
ispA YPO3176 geranyltranstransferasechromosome CDS3538713 921 + 0.505972
ispB YPO3513 octaprenyl-diphosphate synthasechromosome CDS3922471 972 + 0.489712
kbl YPO0059 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS70187 1212 + 0.50165
lcrG YPCD1.32c low calcium response protein GpCD1 CDS22917 288 - 0.46875
ldhA YPO2329 D-lactate dehydrogenasechromosome CDS2620043 993 + 0.460222
lipA YPO2598 lipoyl synthasechromosome CDS2919074 966 - 0.501035
lipB YPO2599 lipoyltransferasechromosome CDS2920232 702 - 0.490029
lplA YPO2414 lipoate-protein ligase Achromosome CDS2714697 1017 - 0.450344
menA YPO0104 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS112060 918 - 0.490196
menB YPO2525 naphthoate synthasechromosome CDS2834267 858 - 0.519814
menC YPO2524 O-succinylbenzoate synthasechromosome CDS2833296 972 - 0.569959
menD YPO2527 2-oxoglutarate decarboxylasechromosome CDS2835953 1704 - 0.569836
menF YPO2528 menaquinone-specific isochorismate synthasechromosome CDS2837884 1368 - 0.512427
menG YPO0103 ribonuclease activity regulator protein RraAchromosome CDS111433 486 - 0.475309
metK YPO0931 S-adenosylmethionine synthetasechromosome CDS1023523 1155 + 0.497835
moaA YPO1159 molybdenum cofactor biosynthesis protein Achromosome CDS1306853 981 + 0.492355
moaC YPO1160 molybdenum cofactor biosynthesis protein Cchromosome CDS1307934 480 + 0.533333
moaD YPO1161 molybdopterin [mpt] converting factor, subunit 1chromosome CDS1308410 246 + 0.528455
moaE YPO1162 molybdopterin [mpt] converting factor, subunit 2chromosome CDS1308655 456 + 0.541667
mobA YPO0013 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS19702 642 - 0.433022
mobB YPO0012 probable molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS19172 531 - 0.40678
moeA YPO1495 molybdopterin biosynthesis proteinchromosome CDS1696082 1275 - 0.499608
moeB YPO1494 molybdopterin biosynthesis protein MoeBchromosome CDS1695310 768 - 0.497396
mogA YPO0464 molybdenum cofactor biosynthesis proteinchromosome CDS491445 588 + 0.45068
nadA YPO1127 quinolinate synthetasechromosome CDS1273693 1062 + 0.507533
nadB YPO2710 L-aspartate oxidasechromosome CDS3037547 1638 - 0.484127
nadC YPO3424 nicotinate-nucleotide pyrophosphorylasechromosome CDS3828410 909 + 0.488449
nadD YPO2607 nicotinic acid mononucleotide adenyltransferasechromosome CDS2928592 663 - 0.490196
nadR YPO0444 nicotinamide-nucleotide adenylyltransferasechromosome CDS465364 1272 + 0.488208
pabA YPO0169 para-aminobenzoate synthase component IIchromosome CDS188810 576 + 0.520833
panB YPO3401 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS3799198 801 + 0.521848
panC YPO3402 pantoate--beta-alanine ligasechromosome CDS3800086 855 + 0.530994
panD YPO3403 aspartate 1-decarboxylase precursorchromosome CDS3801351 381 + 0.47769
panF YPO3657 sodium/panthothenate symporterchromosome CDS4075981 1455 - 0.527835
pdxA YPO0493 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS523776 996 - 0.501004
pdxB YPO2763 erythronate-4-phosphate dehydrogenasechromosome CDS3097144 1128 + 0.54078
pdxH YPO2370 pyridoxamine 5'-phosphate oxidasechromosome CDS2663279 654 - 0.490826
pdxJ YPO2930 pyridoxal phosphate biosynthetic proteinchromosome CDS3274232 732 - 0.495902
pdxY YPO2368 pyridoxine kinasechromosome CDS2660808 861 - 0.502904
pncB YPO1413 nicotinate phosphoribosyltransferasechromosome CDS1602424 1206 - 0.472637
pnuC YPO1128 intergral membrane NMN transport protein PnuCchromosome CDS1274876 726 + 0.461433
poxB YPO1358 pyruvate dehydrogenasechromosome CDS1521957 1722 - 0.522648
ribA YPO2222 GTP cyclohydrolase II proteinchromosome CDS2499403 591 - 0.470389
ribB YPO0658 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS718102 654 + 0.524465
ribD YPO3183 riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductachromosome CDS3545250 1110 - 0.527928
ribE YPO2391 riboflavin synthase subunit alphachromosome CDS2686255 657 - 0.450533
ribF YPO0474 hypothetical proteinchromosome CDS503765 939 + 0.500533
ribH YPO3182 riboflavin synthase subunit betachromosome CDS3544644 471 - 0.475584
serA YPO0914 D-3-phosphoglycerate dehydrogenasechromosome CDS1003162 1242 - 0.488728
serC YPO1389 phosphoserine aminotransferasechromosome CDS1568497 1086 + 0.474217
thiC YPO3739 thiamine biosynthesis protein ThiCchromosome CDS4190602 2046 + 0.518084
thiD YPO2859 phosphomethylpyrimidine kinasechromosome CDS3196123 801 - 0.556804
thiE YPO3740 thiamine-phosphate pyrophosphorylasechromosome CDS4192661 648 + 0.533951
thiF YPO3741 thiamine biosynthesis protein ThiFchromosome CDS4193298 798 + 0.5401
thiG YPO3742 thiazole synthasechromosome CDS4194123 1002 + 0.535928
thiH YPO3743 thiamine biosynthesis protein ThiHchromosome CDS4195117 1131 + 0.501326
thiL YPO3180 thiamine monophosphate kinasechromosome CDS3542977 990 - 0.489899
thiQ YPO0520 thiamine transport ATP-binding proteinchromosome CDS563714 684 - 0.548246
trpE YPO2208 anthranilate synthase component Ichromosome CDS2482592 1566 - 0.505109
trpG YPO2207 anthranilate synthase component IIchromosome CDS2482014 579 - 0.519862
ubiA YPO0311 4-hydroxybenzoate octaprenyltransferasechromosome CDS317386 867 + 0.484429
ubiC YPO0310 putative chorismate--pyruvate lyasechromosome CDS316696 525 + 0.508571
ubiE YPO3781 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS4243465 756 - 0.448413
ubiF YPO2621 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS2944454 1182 + 0.534687
ubiG YPO1215 3-demethylubiquinone-9 3-methyltransferasechromosome CDS1369739 729 - 0.499314
ubiH YPO0909 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS998045 1179 - 0.550466
ubiX YPO2773 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS3108000 573 + 0.467714
visC YPO0908 hypothetical proteinchromosome CDS996652 1221 - 0.54955
wbyH YPO3111 hypothetical proteinchromosome CDS3466984 1284 - 0.352804
ybtS YPO1916 anthranilate synthase component Ichromosome CDS2168365 1305 + 0.55249
 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA y0055 hypothetical proteinchromosome CDS67548 714 + 0.540616
NA y3531 kinasechromosome CDS3916409 363 - 0.501377
NA y1072 O-antigen synthesis protein, WbyHchromosome CDS1207504 1284 + 0.352804
NA y2336 hypothetical proteinchromosome CDS2570885 1971 + 0.468798
NA y0547 coproporphyrinogen III oxidasechromosome CDS613493 1314 - 0.509893
NA y3270 hypothetical proteinchromosome CDS3599766 282 + 0.507092
NA y2837 ABC transport proteinchromosome CDS3139448 786 - 0.521628
NA y0817 6-pyruvoyl tetrahydrobiopterin synthasechromosome CDS916079 366 - 0.469945
NA y0666 hypothetical proteinchromosome CDS751439 264 - 0.409091
NA y1651 hypothetical proteinchromosome CDS1824719 951 + 0.480547
NA y2111 hypothetical proteinchromosome CDS2328250 693 + 0.434343
NA y2330 hypothetical proteinchromosome CDS2566128 1110 - 0.526126
NA Y1104 putative porphyrin biosynthetic enzymepMT-1 CDS85075 2367 + 0.52049
NA y3402 hypothetical proteinchromosome CDS3765258 1485 + 0.482828
NA y3158 enzymechromosome CDS3469308 828 - 0.4843
NA y4096 2-hydroxyacid dehydrogenasechromosome CDS4544627 1017 + 0.508358
NA y1196 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS1340586 1182 + 0.534687
NA y0461 oxidoreductasechromosome CDS511092 1521 + 0.487837
NA y2896 dehydrogenasechromosome CDS3200770 966 + 0.600414
NA y3300 ligasechromosome CDS3632309 597 + 0.517588
NA y0957 hypothetical proteinchromosome CDS1077906 1083 + 0.481994
NA y3093 permeasechromosome CDS3403208 1359 + 0.491538
NA y0554 hypothetical proteinchromosome CDS621131 1062 - 0.490584
NA y3332 coproporphyrinogen III oxidasechromosome CDS3664225 1143 + 0.492563
apbA y1014 2-dehydropantoate 2-reductasechromosome CDS1141697 912 - 0.464912
ascD y1067 CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS1202399 990 + 0.374747
bioA y3032 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS3339833 1281 + 0.533958
bioB y3031 biotin synthetasechromosome CDS3338697 1038 - 0.510597
bioD y3028 dithiobiotin synthetasechromosome CDS3336044 738 - 0.539295
bioF y3030 8-amino-7-oxononanoate synthasechromosome CDS3337546 1152 - 0.580729
birA y0472 biotin--protein ligasechromosome CDS529088 960 + 0.40625
btuB y0325 outer membrane receptor for transport of vitamin B12, E colicins, and bacteriophage BF23chromosome CDS352703 1962 + 0.469419
btuC y1914 vtamin B12-transporter permeasechromosome CDS2107432 1077 + 0.486537
btuD y1916 vitamin B12-transporter ATPasechromosome CDS2109154 762 + 0.469816
btuR y2055 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS2263909 591 - 0.497462
coaA y0473 pantothenate kinasechromosome CDS530082 951 - 0.398528
coaE y0757 dephospho-CoA kinasechromosome CDS843371 621 - 0.470209
cysD y0823 sulfate adenylyltransferase subunit 2chromosome CDS924169 909 + 0.491749
cysG y3941 uroporphyrinogen III methylasechromosome CDS4395216 1449 - 0.529331
dfp y0093 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS99711 1332 + 0.476727
dxs y1008 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS1136081 1860 - 0.489247
fhuC y0796 ATP-binding component of hydroxymate-dependent iron ABC transporterchromosome CDS890477 795 + 0.543396
folA y3688 dihydrofolate reductase type Ichromosome CDS4099022 483 - 0.486542
folC y1602 dihydrofolate:folylpolyglutamate synthetasechromosome CDS1771007 1383 + 0.532176
folD y1110 5,10-methylene-tetrahydrofolate dehydrogenasechromosome CDS1248325 867 - 0.514418
folE y2664 GTP cyclohydrolase Ichromosome CDS2938298 717 - 0.456067
folK y0787 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinasechromosome CDS879625 480 - 0.529167
folP y0683 7,8-dihydropteroate synthasechromosome CDS766683 834 + 0.476019
gshA y0887 glutamate--cysteine ligasechromosome CDS997588 1599 + 0.481551
gshB y3321 glutathione synthetasechromosome CDS3655274 960 + 0.491667
hemA y2291 glutamyl-tRNA reductasechromosome CDS2527649 1317 - 0.501898
hemB y0459 delta-aminolevulinic acid dehydratasechromosome CDS509248 1023 + 0.477028
hemC y0381 porphobilinogen deaminasechromosome CDS425084 1110 - 0.525225
hemD y0380 uroporphyrinogen-III synthetasechromosome CDS424338 750 - 0.512
hemE y0496 uroporphyrinogen decarboxylasechromosome CDS557874 1068 + 0.512172
hemF y1451 coproporphyrinogen III oxidasechromosome CDS1608645 930 - 0.533333
hemG y0469 protoporphyrin oxidasechromosome CDS521384 534 + 0.428839
hemH y1066 ferrochelatasechromosome CDS1200839 963 + 0.457944
hemL y0799 glutamate-1-semialdehyde aminotransferasechromosome CDS894727 1281 - 0.508977
hemN y3807 coproporphyrinogen III oxidasechromosome CDS4228457 1380 - 0.477536
hemX y0379 uroporphyrinogen III methylasechromosome CDS423183 1134 - 0.506173
hemY y0378 hemY proteinchromosome CDS421960 1221 - 0.525798
ilvB y2126 acetolactate synthase large subunitchromosome CDS2346815 1683 + 0.498515
ilvC y0345 ketol-acid reductoisomerasechromosome CDS381832 1479 + 0.503043
ilvE y0337 branched-chain amino acid aminotransferasechromosome CDS372461 1002 + 0.511976
ilvG y0336 acetolactate synthase II large subunitchromosome CDS370613 1647 + 0.532483
ilvI y3640 acetolactate synthase III large subunitchromosome CDS4034795 1782 - 0.497194
ispA y1009 geranyltranstransferasechromosome CDS1138096 921 - 0.505972
ispB y0671 octaprenyl diphosphate synthasechromosome CDS755300 972 - 0.489712
kbl y0081 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS89982 1242 - 0.500805
kdtB y0088 phosphopantetheine adenylyltransferasechromosome CDS96908 480 + 0.4625
ldhA y2004 D-lactate dehydrogenasechromosome CDS2205964 1050 - 0.449524
lipA y1171 lipoyl synthasechromosome CDS1315206 966 - 0.501035
lipB y1173 lipoyltransferasechromosome CDS1316364 702 - 0.490029
lplA y1926 lipoate-protein ligase Achromosome CDS2118545 1017 + 0.450344
menA y0293 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS311719 930 - 0.488172
menB y1662 naphthoate synthasechromosome CDS1837037 867 + 0.516724
menC y1663 O-succinylbenzoate synthasechromosome CDS1837903 972 + 0.569959
menD y1660 2-oxoglutarate decarboxylasechromosome CDS1834514 1704 + 0.569836
menF y1659 menaquinone-specific isochorismate synthasechromosome CDS1832913 1374 + 0.5131
menG y0292 ribonuclease activity regulator protein RraAchromosome CDS311092 486 - 0.475309
metK y3314 S-adenosylmethionine synthetasechromosome CDS3651592 1155 + 0.497835
moaA y3023 molybdenum cofactor biosynthesis protein Achromosome CDS3328974 1026 - 0.491228
moaC y3021 molybdenum cofactor biosynthesis protein Cchromosome CDS3328394 483 - 0.532091
moaD y3020 molybdopterin biosynthesis proteinchromosome CDS3328152 246 - 0.528455
moaE y3019 molybdopterin converting factor, subunit 2chromosome CDS3327697 459 - 0.542484
mobA y3815 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS4238480 642 + 0.433022
mobB y3816 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS4239094 558 + 0.408602
moeA y2673 molybdopterin biosynthesis proteinchromosome CDS2950278 1275 + 0.499608
moeB y2674 molybdopterin biosynthesis protein MoeBchromosome CDS2951524 801 + 0.496879
mogA y3710 molybdenum cofactor biosynthesis proteinchromosome CDS4126571 588 - 0.45068
nadA y3052 quinolinate synthetasechromosome CDS3360072 1062 - 0.507533
nadB y1289 L-aspartate oxidasechromosome CDS1432477 1638 - 0.484127
nadC y0762 nicotinate-nucleotide pyrophosphorylasechromosome CDS849223 948 - 0.483122
nadD y1181 nicotinic acid mononucleotide adenyltransferasechromosome CDS1324724 693 - 0.484848
pabA y3953 para-aminobenzoate synthase component IIchromosome CDS4411873 576 + 0.519097
pabB y2535 para-aminobenzoate synthase component Ichromosome CDS2796181 1377 + 0.511256
pabC y1762 4-amino-4-deoxychorismate lyasechromosome CDS1944034 807 + 0.488228
panB y0786 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS878559 864 - 0.511574
panC y0785 pantoate--beta-alanine ligasechromosome CDS877617 855 - 0.530994
panD y0784 aspartate 1-decarboxylase precursorchromosome CDS876826 381 - 0.47769
panF y0211 sodium/panthothenate symporterchromosome CDS225850 1461 + 0.527721
pdxA y3682 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS4093820 1008 + 0.499008
pdxB y1597 erythronate-4-phosphate dehydrogenasechromosome CDS1765624 1188 + 0.537037
pdxH y1965 pyridoxamine 5'-phosphate oxidasechromosome CDS2165025 654 + 0.490826
pdxJ y1300 pyridoxal phosphate biosynthetic proteinchromosome CDS1443983 732 + 0.495902
pdxY y1967 pyridoxine kinasechromosome CDS2167289 861 + 0.502904
pncB y2757 nicotinate phosphoribosyltransferasechromosome CDS3044056 1251 + 0.47482
pnuC y3051 nucleoside/purine/pyrimidine transporterchromosome CDS3359225 726 - 0.461433
poxB y2821 pyruvate dehydrogenasechromosome CDS3126012 1722 + 0.522648
ribA y2064 GTP cyclohydrolase II proteinchromosome CDS2275663 603 - 0.466003
ribB y3520 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3903743 654 - 0.524465
ribD y1000 bifunctional pyrimidine deaminase/reductasechromosome CDS1129411 1110 + 0.527928
ribE y1946 riboflavin synthase subunit alphachromosome CDS2147348 657 + 0.450533
ribF y3701 hypothetical proteinchromosome CDS4113900 939 - 0.500533
ribH y1001 riboflavin synthase subunit betachromosome CDS1130596 531 + 0.47646
serA y3301 D-3-phosphoglycerate dehydrogenasechromosome CDS3633170 1344 - 0.486607
serC y2784 phosphoserine aminotransferasechromosome CDS3078156 1086 - 0.474217
tbpA y3651 thiamin-binding periplasmic protein of ABC transporterchromosome CDS4051526 1083 + 0.491228
thiC y0491 thiamine biosynthesis protein ThiCchromosome CDS553068 2046 - 0.518084
thiD y1373 phosphomethylpyrimidine kinasechromosome CDS1523104 801 + 0.556804
thiE y0490 thiamine-phosphate pyrophosphorylasechromosome CDS552407 690 - 0.534783
thiF y0489 thiamine biosynthesis protein ThiFchromosome CDS551620 798 - 0.5401
thiG y0488 thiazole synthasechromosome CDS550591 1002 - 0.53493
thiH y0487 thiamine biosynthesis protein ThiHchromosome CDS549468 1146 - 0.501745
thiL y1003 thiamine monophosphate kinasechromosome CDS1131804 990 + 0.489899
thiQ y3653 ATP-binding component of a transport systemchromosome CDS4054157 732 + 0.543716
trpE y2051 anthranilate synthase component Ichromosome CDS2258835 1566 - 0.505109
ubiA y0569 4-hydroxybenzoate octaprenyltransferasechromosome CDS643500 867 + 0.484429
ubiB y0462 NAD(P)H-flavin reductasechromosome CDS512625 744 + 0.486559
ubiC y0568 chorismate lyasechromosome CDS642768 567 + 0.516755
ubiE y0449 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS501495 756 + 0.448413
ubiG y2973 3-demethylubiquinone-9 3-methyltransferasechromosome CDS3277275 729 + 0.499314
ubiH y3296 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3628053 1179 - 0.550466
ubiX y1606 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS1775799 588 + 0.467687
visC y3295 hypothetical proteinchromosome CDS3626660 1437 - 0.537926
ybtS y2394 anthranilate synthase component Ichromosome CDS2647129 1305 - 0.55249
yiuC y2873 ATP-binding protein of iron/siderophore ABC transporterchromosome CDS3171988 789 - 0.504436
ysuD y2637 ATP-binding component for iron transport systemchromosome CDS2904022 849 + 0.485277
 
Yersinia pestis Nepal516, Nepal516
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPN_0224 ThiS, thiamine-biosynthesischromosome CDS279392 216 - 0.49537
NA YPN_0113 uroporphyrinogen-III synthasechromosome CDS152360 750 - 0.512
NA YPN_0068 branched-chain amino acid aminotransferasechromosome CDS100599 927 + 0.515642
NA YPN_3358 4-hydroxybenzoate octaprenyltransferasechromosome CDS3827373 867 - 0.484429
NA YPN_0917 2-dehydropantoate 2-reductasechromosome CDS1067589 912 - 0.464912
NA YPN_0397 thiamine-binding periplasmic proteinchromosome CDS485198 1077 - 0.492108
NA YPN_0905 riboflavin biosynthesis protein RibD: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductasechromosome CDS1057262 1110 + 0.527928
NA YPN_3359 chorismate--pyruvate lyasechromosome CDS3828405 525 - 0.508571
NA YPN_0231 uroporphyrinogen decarboxylasechromosome CDS285858 1068 + 0.512172
NA YPN_2350 para-aminobenzoate synthase component Ichromosome CDS2631460 1377 + 0.511256
NA YPN_0193 delta-aminolevulinic acid dehydratasechromosome CDS237230 1023 + 0.477028
NA YPN_1825 pyridoxamine kinasechromosome CDS2060993 861 - 0.502904
NA YPN_2639 transport ATP-binding proteinchromosome CDS2975465 786 - 0.521628
NA YPN_3515 sodium/pantothenate symporterchromosome CDS4012676 1455 + 0.527835
NA YPN_2484 molybdopterin biosynthesis proteinchromosome CDS2787616 771 + 0.496757
NA YPN_2588 phosphoserine aminotransferasechromosome CDS2914159 1086 - 0.474217
NA YPN_1845 riboflavin synthase alpha chainchromosome CDS2084708 657 - 0.450533
NA YPN_2915 permeasechromosome CDS3272149 1485 + 0.486869
NA YPN_2564 nicotinate phosphoribosyltransferasechromosome CDS2880106 1221 + 0.473382
NA YPN_3127 S-adenosylmethionine synthetasechromosome CDS3519419 1155 + 0.497835
NA YPN_0723 Phosphoadenylyl-sulfate reductase (thioredoxin)chromosome CDS849825 285 + 0.494737
NA YPN_2841 molybdenum cofactor biosynthesis protein Cchromosome CDS3197462 480 - 0.533333
NA YPN_3112 5-formyltetrahydrofolate cyclo-ligase-family proteinchromosome CDS3500156 597 + 0.517588
NA YPN_3373 hypothetical proteinchromosome CDS3849553 1062 + 0.490584
NA YPN_0698 ferrichrome transport ATP-binding protein FhuCchromosome CDS819414 795 + 0.543396
NA YPN_1690 GTP cyclohydrolase IIchromosome CDS1908050 603 - 0.466003
NA YPN_2762 3-demethylubiquinone-9 3-methyltransferasechromosome CDS3113263 729 + 0.499314
NA YPN_0207 pantothenate kinasechromosome CDS258065 951 - 0.398528
NA YPN_1741 dethiobiotin synthetasechromosome CDS1961734 615 + 0.430894
NA YPN_2123 menaquinone-specific isochorismate synthasechromosome CDS2399668 1374 - 0.5131
NA YPN_0346 riboflavin biosynthesis protein: riboflavin kinase and FMN adenyltransferasechromosome CDS422968 939 + 0.500533
NA YPN_3791 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS4342399 1212 - 0.50165
NA YPN_2847 dethiobiotin synthetasechromosome CDS3205093 723 - 0.542185
NA YPN_2120 naphthoate synthasechromosome CDS2396051 858 - 0.519814
NA YPN_0111 protoheme IX biogenesis proteinchromosome CDS149982 1221 - 0.525798
NA YPN_0315 transcriptional regulator NadRchromosome CDS384573 1272 + 0.488208
NA YPN_2870 intergral membrane NMN transport protein PnuCchromosome CDS3228274 726 - 0.461433
NA YPN_0077 ketol-acid reductoisomerasechromosome CDS109854 1479 + 0.503043
NA YPN_1404 membrane proteinchromosome CDS1597973 477 + 0.48847
NA YPN_2623 pyruvate dehydrogenase (cytochrome)chromosome CDS2962030 1722 + 0.522648
NA YPN_0664 nicotinate-nucleotide pyrophosphorylase (carboxylating)chromosome CDS778159 948 - 0.483122
NA YPN_1107 putative 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS1270497 1182 + 0.534687
NA YPN_2483 molybdopterin biosynthesis proteinchromosome CDS2786340 1275 + 0.499608
NA YPN_3108 2-octaprenyl-6-methoxyphenol hydroxylasechromosome CDS3495900 1179 - 0.550466
NA YPN_0908 thiamine-monophosphate kinasechromosome CDS1059655 990 + 0.489899
NA YPN_3797 phosphopantetheine adenylyltransferasechromosome CDS4349325 480 + 0.4625
NA YPN_1827 pyridoxamine 5'-phosphate oxidasechromosome CDS2063464 723 - 0.489627
NA YPN_1209 pyridoxal phosphate biosynthetic protein PdxJchromosome CDS1373884 732 + 0.495902
NA YPN_1083 lipoic acid synthetasechromosome CDS1245117 966 - 0.501035
NA YPN_0222 thiamine biosynthesis protein ThiHchromosome CDS277452 1131 - 0.501326
NA YPN_1456 hypothetical proteinchromosome CDS1655285 1605 - 0.464174
NA YPN_3132 glutathione synthetasechromosome CDS3523101 960 + 0.491667
NA YPN_0687 pantoate--beta-alanine ligasechromosome CDS806553 855 - 0.530994
NA YPN_0722 hypothetical proteinchromosome CDS849383 468 + 0.50641
NA YPN_0923 protoheme IX farnesyltransferasechromosome CDS1073154 888 - 0.46509
NA YPN_1755 acetolactate synthase large subunitchromosome CDS1980178 1668 + 0.5006
NA YPN_2026 4-amino-4-deoxychorismate lyasechromosome CDS2289252 807 - 0.488228
NA YPN_0195 hypothetical proteinchromosome CDS239074 1521 + 0.487837
NA YPN_3895 para-aminobenzoate synthase glutamine amidotransferase component IIchromosome CDS4428909 576 - 0.519097
NA YPN_2122 menaquinone biosynthesis proteinchromosome CDS2397737 1704 - 0.569836
NA YPN_2849 8-amino-7-oxononanoate synthasechromosome CDS3206595 1152 - 0.580729
NA YPN_3107 monooxygenasechromosome CDS3494507 1344 - 0.539435
NA YPN_0240 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS300677 588 - 0.435374
NA YPN_0727 sulfate adenylyltransferase subunit 2chromosome CDS853154 909 + 0.491749
NA YPN_0659 hypothetical proteinchromosome CDS772379 621 - 0.470209
NA YPN_3224 integral membrane efflux proteinchromosome CDS3663954 1557 - 0.48298
NA YPN_2183 D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS2467181 1188 - 0.537037
NA YPN_0226 thiamine-phosphate pyrophosphorylasechromosome CDS280391 675 - 0.533333
NA YPN_3766 transferasechromosome CDS4319965 714 + 0.540616
NA YPN_0359 dihydrofolate reductasechromosome CDS438302 483 + 0.486542
NA YPN_0508 dihydroneopterin aldolasechromosome CDS615301 360 + 0.5
NA YPN_3262 hypothetical proteinchromosome CDS3719957 264 + 0.409091
NA YPN_0227 thiamine biosynthesis protein ThiCchromosome CDS281052 2046 - 0.518084
NA YPN_0204 protoporphyrinogen oxidasechromosome CDS249366 534 + 0.428839
NA YPN_2447 iron-siderophore transport system, ATP-binding componentchromosome CDS2739373 849 + 0.485277
NA YPN_0395 thiamine transport ATP-binding proteinchromosome CDS482918 711 - 0.540084
NA YPN_1877 vitamin B12 transport ATP-binding proteinchromosome CDS2122797 759 - 0.470356
NA YPN_2871 quinolinate synthetase Achromosome CDS3229121 1062 - 0.508475
NA YPN_2840 molybdopterin (mpt) converting factor, subunit 1chromosome CDS3197220 246 - 0.528455
NA YPN_2178 FolC bifunctional proteinchromosome CDS2461603 1305 - 0.531034
NA YPN_1084 lipoate-protein ligase Bchromosome CDS1246275 702 - 0.490029
NA YPN_0225 thiamine biosynthesis protein ThiFchromosome CDS279604 798 - 0.5401
NA YPN_1788 D-lactate dehydrogenasechromosome CDS2022193 993 + 0.460222
NA YPN_MT0061 porphyrin biosynthetic proteinpMT CDS61814 2367 - 0.52049
NA YPN_3802 DNA/pantothenate metabolism flavoproteinchromosome CDS4352128 1332 + 0.476727
NA YPN_0066 acetolactate synthase isozyme II large subunitchromosome CDS98676 1647 + 0.532483
NA YPN_0517 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS627673 654 + 0.524465
NA YPN_3245 dihydropteroate synthasechromosome CDS3704143 834 - 0.476019
NA YPN_0911 1-deoxy-D-xylulose 5-phosphate synthasechromosome CDS1061973 1860 - 0.489247
NA YPN_0793 glutamate--cysteine ligasechromosome CDS926565 1599 + 0.481551
NA YPN_0196 NAD(P)H-flavin reductasechromosome CDS240649 702 + 0.487179
NA YPN_0367 pyridoxal phosphate biosynthetic proteinchromosome CDS442979 1005 - 0.499502
NA YPN_3113 D-3-phosphoglycerate dehydrogenasechromosome CDS3501017 1242 - 0.488728
NA YPN_1278 phosphomethylpyrimidine kinasechromosome CDS1453024 801 + 0.556804
NA YPN_1092 nicotinate-nucleotide adenylyltransferasechromosome CDS1254635 663 - 0.490196
NA YPN_2119 O-succinylbenzoate-CoA synthasechromosome CDS2395080 972 - 0.569959
NA YPN_0689 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS808561 480 - 0.529167
NA YPN_0239 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS300147 531 - 0.40678
NA YPN_2131 D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS2408284 951 - 0.480547
NA YPN_0337 molybdopterin biosynthesis proteinchromosome CDS410649 588 + 0.45068
NA YPN_3380 coproporphyrinogen III oxidasechromosome CDS3856939 1314 + 0.509893
NA YPN_1461 coenzyme synthetasechromosome CDS1660720 1287 + 0.520591
NA YPN_2851 adenosylmethionine-8-amino-7-oxononanoate aminotransferasechromosome CDS3208882 1281 + 0.533958
NA YPN_0114 porphobilinogen deaminasechromosome CDS153106 942 - 0.547771
NA YPN_2976 hypothetical proteinchromosome CDS3337127 828 - 0.4843
NA YPN_0973 cdp-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS1130249 990 + 0.374747
NA YPN_2667 siderophore ABC transporter, ATP-binding subunitchromosome CDS3008004 789 - 0.504436
NA YPN_3750 S-adenosylmethionine:2-demethylmenaquinone methyltransferasechromosome CDS4302899 486 + 0.475309
NA YPN_3723 D-isomer specific 2-hydroxyacid dehydrogenasechromosome CDS4273455 981 + 0.510703
NA YPN_0979 hypothetical proteinchromosome CDS1135354 1284 + 0.352804
NA YPN_0686 aspartate 1-decarboxylase precursorchromosome CDS805762 381 - 0.47769
NA YPN_0206 bifunctional protein BirAchromosome CDS257071 960 + 0.40625
NA YPN_0407 acetolactate synthase isozyme III large subunitchromosome CDS501301 1728 + 0.497685
NA YPN_3143 oxygen-independent coproporphyrinogen III oxidasechromosome CDS3532052 1143 + 0.492563
NA YPN_0861 thiamine biosynthesis lipoproteinchromosome CDS1004908 1080 + 0.482407
NA YPN_0972 ferrochelatasechromosome CDS1128689 963 + 0.457944
NA YPN_1681 cob(I)alamin adenosyltransferasechromosome CDS1896296 645 - 0.496124
NA YPN_0223 thiamine biosynthesis protein ThiGchromosome CDS278575 816 - 0.539216
NA YPN_2474 GTP cyclohydrolase Ichromosome CDS2774360 705 - 0.452482
NA YPN_2640 FecCD transport family proteinchromosome CDS2976247 903 - 0.516058
NA YPN_1868 lipoate-protein ligase Achromosome CDS2113151 1017 - 0.450344
NA YPN_0183 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS229477 756 + 0.448413
NA YPN_1676 anthranilate synthase component IIchromosome CDS1890644 579 - 0.519862
NA YPN_0248 oxygen-independent coproporphyrinogen III oxidasechromosome CDS309968 1374 + 0.477438
NA YPN_0726 siroheme synthasechromosome CDS851725 1419 + 0.55673
NA YPN_0719 6-pyruvoyl tetrahydrobiopterin synthase family proteinchromosome CDS845066 360 - 0.475
NA YPN_3749 1,4-dihydroxy-2-naphthoate octaprenyltransferasechromosome CDS4301828 930 + 0.488172
NA YPN_0688 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS807495 798 - 0.521303
NA YPN_1498 glutamyl-tRNA reductasechromosome CDS1699171 1317 + 0.501898
NA YPN_3257 octaprenyl-diphosphate synthasechromosome CDS3715388 972 + 0.489712
NA YPN_1353 coproporphyrinogen III oxidase, aerobic HemFchromosome CDS1538567 930 - 0.533333
NA YPN_2850 biotin synthasechromosome CDS3207746 1038 - 0.510597
NA YPN_1879 puative vitamin B12 transport system permease proteinchromosome CDS2124204 1023 - 0.485826
NA YPN_1198 L-aspartate oxidasechromosome CDS1362378 1638 - 0.484127
NA YPN_0701 glutamate-1-semialdehyde 2,1-aminomutasechromosome CDS823664 1281 - 0.508977
NA YPN_0912 geranyltranstransferasechromosome CDS1063988 921 - 0.505972
NA YPN_1020 FolD bifunctional proteinchromosome CDS1178209 867 - 0.514418
NA YPN_0112 uroporphyrin-III C-methyltransferasechromosome CDS151205 1125 - 0.506667
NA YPN_2842 molybdenum cofactor biosynthesis protein Achromosome CDS3198042 1026 - 0.491228
NA YPN_1677 anthranilate synthase component Ichromosome CDS1891222 1566 - 0.505109
NA YPN_0906 6,7-dimethyl-8-ribityllumazine synthasechromosome CDS1058507 471 + 0.475584
NA YPN_3907 siroheme synthasechromosome CDS4444765 1413 + 0.530078
NA YPN_2174 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2457591 573 - 0.467714
 
Yersinia pestis biovar Microtus str. 91001, 91001
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YP_pMT077 putative porphyrin biosynthetic proteinpMT1 CDS68144 2367 - 0.52049
NA YP_0451 hypothetical proteinchromosome CDS476003 1062 - 0.490584
NA YP_0565 hypothetical proteinchromosome CDS606394 264 - 0.409091
NA YP_3610 putative 5-formyltetrahydrofolatecyclo-ligase-family proteinchromosome CDS4107259 597 + 0.517588
NA YP_2825 Dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis family 1chromosome CDS3135639 828 - 0.4843
NA YP_0313 sulfite reductase, alpha subunitchromosome CDS328727 366 - 0.469945
abgT YP_3420 putative integral membrane efflux proteinchromosome CDS3852506 1557 + 0.48298
apbA YP_0760 2-dehydropantoate 2-reductasechromosome CDS819493 912 - 0.464912
apbE YP_0699 thiamine biosynthesis lipoproteinchromosome CDS757642 1083 + 0.481994
bioA YP_1010 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS1087912 1281 + 0.533958
bioB YP_1009 biotin synthasechromosome CDS1086776 1038 - 0.510597
bioD YP_1006 dithiobiotin synthetasechromosome CDS1084123 738 - 0.539295
bioD2 YP_2065 putative dethiobiotin synthetasechromosome CDS2296221 693 + 0.434343
bioF YP_1008 8-amino-7-oxononanoate synthasechromosome CDS1085625 1152 - 0.580729
birA YP_3289 biotin--protein ligasechromosome CDS3672208 960 + 0.40625
btuB YP_3138 putative vitamin B12 receptor proteinchromosome CDS3497913 1962 + 0.469419
btuC2 YP_2212 vtamin B12-transporter permeasechromosome CDS2462279 1077 - 0.486537
btuD YP_2210 vitamin B12-transporter ATPasechromosome CDS2460872 762 - 0.471129
btuR YP_2011 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS2233507 591 - 0.497462
coaA YP_3290 pantothenate kinasechromosome CDS3673202 951 - 0.398528
coaD YP_0054 phosphopantetheine adenylyltransferasechromosome CDS63789 480 - 0.4625
coaE YP_0254 dephospho-CoA kinasechromosome CDS256111 621 - 0.470209
cysD YP_0321 sulfate adenylyltransferase subunit 2chromosome CDS336814 909 + 0.491749
cysG1 YP_0160 siroheme synthasechromosome CDS172879 1413 - 0.530078
ddhD YP_0814 CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS880228 990 + 0.374747
dfp YP_0049 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS60134 1218 - 0.481117
dxs YP_0754 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS813877 1860 - 0.489247
fUI1 YP_2766 putative permeasechromosome CDS3071341 1512 + 0.486772
fadI YP_3280 NAD(P)H-flavin reductasechromosome CDS3656455 744 + 0.486559
fepC YP_1251 putative transport ATP-binding proteinchromosome CDS1365774 786 - 0.521628
fhuC YP_0293 ferrichrome transport ATP-binding protein FhuCchromosome CDS303144 795 + 0.543396
folA YP_3693 dihydrofolate reductasechromosome CDS4205458 483 - 0.486542
folB YP_2963 Dihydroneopterin aldolasechromosome CDS3297879 276 + 0.507246
folC YP_2395 putative FolC bifunctional proteinchromosome CDS2662555 1383 - 0.531453
folD YP_0855 putative FolD bifunctional proteinchromosome CDS926157 867 - 0.514418
folE YP_1395 GTP cyclohydrolase Ichromosome CDS1537524 717 + 0.456067
folK YP_0285 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinasechromosome CDS292291 480 - 0.529167
folP YP_0582 dihydropteroate synthasechromosome CDS621638 834 + 0.476019
gshA YP_0385 glutamate--cysteine ligasechromosome CDS409400 1599 + 0.481551
gshB YP_3507 glutathione synthetasechromosome CDS3992432 960 - 0.491667
hemA YP_1864 glutamyl-tRNA reductasechromosome CDS2072980 1326 + 0.500754
hemB YP_3277 delta-aminolevulinic acid dehydratasechromosome CDS3653078 1023 + 0.477028
hemC YP_3197 porphobilinogen deaminasechromosome CDS3568967 1110 - 0.525225
hemD YP_3196 uroporphyrinogen-III synthetasechromosome CDS3568221 750 - 0.512
hemE YP_3097 uroporphyrinogen decarboxylasechromosome CDS3447457 1068 - 0.512172
hemF YP_2655 coproporphyrinogen III oxidasechromosome CDS2943600 930 + 0.533333
hemG YP_3286 protoporphyrinogen oxidasechromosome CDS3664504 534 + 0.428839
hemH YP_0813 ferrochelatasechromosome CDS878668 963 + 0.457944
hemL YP_0296 glutamate-1-semialdehyde aminotransferasechromosome CDS307394 1281 - 0.509758
hemN1 YP_0022 coproporphyrinogen III oxidasechromosome CDS28771 1380 + 0.477536
hemN2 YP_3496 coproporphyrinogen III oxidasechromosome CDS3983298 1143 - 0.492563
hemX YP_3195 uroporphyrinogen III methylasechromosome CDS3567066 1134 - 0.506173
hemY YP_0819 hypothetical proteinchromosome CDS885332 1284 + 0.352804
hemY2 YP_3194 putative protoheme IX biogenesis proteinchromosome CDS3565843 1221 - 0.525798
ilvB2 YP_2079 acetolactate synthase large subunitchromosome CDS2314837 1683 + 0.498515
ilvC YP_3158 ketol-acid reductoisomerasechromosome CDS3527007 1479 + 0.503043
ilvE YP_3149 branched-chain amino acid aminotransferasechromosome CDS3517752 927 + 0.515642
ilvG YP_3147 acetolactate synthase II large subunitchromosome CDS3515829 1647 + 0.532483
ilvI YP_3646 acetolactate synthase III large subunitchromosome CDS4146307 1782 + 0.497194
ispA YP_0755 geranyltranstransferasechromosome CDS815892 921 - 0.505972
ispB YP_0570 octaprenyl-diphosphate synthasechromosome CDS610255 972 - 0.489712
kbl YP_0060 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS69953 1242 + 0.5
lcrG YP_pCD51 probable Yop regulator LcrGpCD1 CDS37671 288 + 0.46875
ldhA1 YP_2115 D-lactate dehydrogenasechromosome CDS2358455 1050 + 0.449524
ldhA2 YP_2347 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS2610579 951 - 0.480547
ldhA3 YP_3988 2-hydroxyacid dehydrogenasechromosome CDS4538925 1017 + 0.509341
lipA YP_1115 lipoyl synthasechromosome CDS1198926 948 + 0.503165
lipB YP_1114 lipoyltransferasechromosome CDS1198014 702 + 0.490029
lplA YP_2200 lipoate-protein ligase Achromosome CDS2451226 1017 - 0.450344
menA YP_0106 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS112793 930 - 0.488172
menB YP_2336 naphthoate synthasechromosome CDS2598362 858 - 0.519814
menC YP_2335 O-succinylbenzoate synthasechromosome CDS2597391 972 - 0.569959
menD YP_2338 2-oxoglutarate decarboxylasechromosome CDS2600048 1704 - 0.569249
menF YP_2339 menaquinone-specific isochorismate synthasechromosome CDS2601979 1374 - 0.5131
menG YP_0105 ribonuclease activity regulator protein RraAchromosome CDS112166 486 - 0.475309
metK YP_3512 S-adenosylmethionine synthetasechromosome CDS3995910 1155 - 0.497835
moaA YP_1000 molybdenum cofactor biosynthesis protein Achromosome CDS1077052 1026 - 0.491228
moaC YP_0999 molybdenum cofactor biosynthesis protein Cchromosome CDS1076350 483 - 0.532091
moaD YP_0998 molybdopterin [mpt] converting factor, subunit 1chromosome CDS1076108 246 - 0.528455
moaE YP_0997 molybdopterin [mpt] converting factor, subunit 2chromosome CDS1075653 459 - 0.542484
mobA YP_0014 molybdopterin-guanine dinucleotide biosynthesis protein Achromosome CDS19486 642 - 0.431464
mobB YP_0013 probable molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS18956 558 - 0.408602
moeA YP_1385 molybdopterin biosynthesis proteinchromosome CDS1524986 1275 - 0.499608
moeB YP_1384 molybdopterin biosynthesis protein MoeBchromosome CDS1524214 801 - 0.496879
mogA YP_3716 molybdenum cofactor biosynthesis proteinchromosome CDS4233006 588 - 0.45068
nadA YP_1029 quinolinate synthetasechromosome CDS1108151 1062 - 0.507533
nadB YP_2514 L-aspartate oxidasechromosome CDS2785142 1638 - 0.484127
nadC YP_0260 nicotinate-nucleotide pyrophosphorylasechromosome CDS261906 948 - 0.483122
nadD YP_1106 nicotinic acid mononucleotide adenyltransferasechromosome CDS1189677 693 + 0.484848
nadR YP_3738 nicotinamide-nucleotide adenylyltransferasechromosome CDS4258426 1272 - 0.488208
paaK YP_1830 putative coenzyme synthetasechromosome CDS2036983 1287 + 0.520591
pabA YP_0171 para-aminobenzoate synthase component IIchromosome CDS189500 576 + 0.519097
pabB YP_1620 para-aminobenzoate synthase component Ichromosome CDS1768546 1377 + 0.511256
pabC YP_2251 4-amino-4-deoxychorismate lyasechromosome CDS2498223 807 - 0.488228
panB YP_0284 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS291225 798 - 0.521303
panC YP_0283 pantoate--beta-alanine ligasechromosome CDS290283 855 - 0.530994
panD YP_0282 aspartate 1-decarboxylase precursorchromosome CDS289492 381 - 0.47769
panF YP_3890 sodium/panthothenate symporterchromosome CDS4427350 1461 + 0.527721
pdxA YP_3686 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS4200967 1008 + 0.499008
pdxB YP_2400 erythronate-4-phosphate dehydrogenasechromosome CDS2668133 1188 - 0.537037
pdxH YP_2156 pyridoxamine 5'-phosphate oxidasechromosome CDS2399790 654 - 0.490826
pdxJ YP_2525 pyridoxal phosphate biosynthetic proteinchromosome CDS2796648 732 + 0.495902
pdxY YP_2154 pyridoxine kinasechromosome CDS2397319 861 - 0.502904
pncB YP_1180 nicotinate phosphoribosyltransferasechromosome CDS1272369 1251 + 0.47482
pnuC YP_1028 intergral membrane NMN transport protein PnuCchromosome CDS1107304 726 - 0.461433
poxB YP_1237 pyruvate dehydrogenasechromosome CDS1352338 1722 + 0.522648
ribA YP_2020 GTP cyclohydrolase II proteinchromosome CDS2245261 603 - 0.466003
ribB YP_2973 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS3310167 654 + 0.524465
ribD YP_0748 riboflavin biosynthesis protein RibD [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductachromosome CDS809166 1110 + 0.527928
ribE YP_2177 riboflavin synthase subunit alphachromosome CDS2422766 657 - 0.450533
ribF YP_3706 hypothetical proteinchromosome CDS4220336 939 - 0.500533
ribH YP_0749 riboflavin synthase subunit betachromosome CDS810351 531 + 0.47646
serA1 YP_1303 putative D-isomer specific 2-hydroxyacid dehydrogenase family proteinchromosome CDS1427154 966 + 0.601449
serA2 YP_3611 D-3-phosphoglycerate dehydrogenasechromosome CDS4108120 1344 - 0.486607
serC YP_1204 phosphoserine aminotransferasechromosome CDS1306465 948 - 0.481013
tbpA3 YP_3657 thiamine-binding periplasmic proteinchromosome CDS4158781 993 + 0.498489
thiC YP_3102 thiamine biosynthesis protein ThiCchromosome CDS3451285 2046 + 0.518084
thiD YP_2725 phosphomethylpyrimidine kinasechromosome CDS3026809 801 - 0.556804
thiE YP_3103 thiamine-phosphate pyrophosphorylasechromosome CDS3453302 690 + 0.534783
thiF YP_3104 thiamine biosynthesis protein ThiFchromosome CDS3453981 798 + 0.5401
thiG YP_3106 thiazole synthasechromosome CDS3454977 831 + 0.540313
thiH YP_3107 thiamine biosynthesis protein ThiHchromosome CDS3455785 1146 + 0.501745
thiL YP_0751 thiamine monophosphate kinasechromosome CDS811559 990 + 0.489899
thiQ YP_3659 thiamine transport ATP-binding proteinchromosome CDS4161322 732 + 0.543716
thiS YP_3105 sulfur carrier protein ThiSchromosome CDS3454718 273 + 0.52381
trpE1 YP_1826 Anthranilate/para-aminobenzoate synthase component Ichromosome CDS2031536 1977 - 0.468892
trpE2 YP_2006 anthranilate synthase component Ichromosome CDS2228467 1566 - 0.505109
trpG YP_2005 anthranilate synthase component IIchromosome CDS2227889 579 - 0.519862
ubiA YP_0467 4-hydroxybenzoate octaprenyltransferasechromosome CDS498378 867 + 0.484429
ubiC YP_0466 putative chorismate--pyruvate lyasechromosome CDS497646 567 + 0.516755
ubiD YP_3279 putative oxidoreductasechromosome CDS3654922 1521 + 0.487837
ubiE YP_3268 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS3645325 756 + 0.448413
ubiF YP_1092 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS1173326 1182 - 0.534687
ubiG YP_0922 3-demethylubiquinone-9 3-methyltransferasechromosome CDS992207 729 + 0.499314
ubiH YP_3606 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS4102986 1179 - 0.550466
ubiX YP_2391 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS2658543 588 - 0.467687
visC YP_3605 hypothetical proteinchromosome CDS4101593 1437 - 0.537926
ybtS YP_1659 anthranilate synthase component Ichromosome CDS1825109 1305 + 0.551724
yiuC YP_1280 putative siderophore ABC transporter, ATP-binding subunitchromosome CDS1398339 789 - 0.504436
ysuD YP_1422 putative iron-siderophore transport system, ATP-binding componentchromosome CDS1571622 849 - 0.485277
 
Yersinia pestis biovar Orientalis str. IP275, IP275
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YpIP275_pIP1202_0006 phosphoadenosine phosphosulfate reductase domain proteinpIP1202 CDS3728 984 - 0.523374
sul1 YpIP275_pIP1202_0188 dihydropteroate synthasepIP1202 CDS152529 840 - 0.616667
sul2 YpIP275_pIP1202_0073 dihydropteroate synthasepIP1202 CDS48941 816 - 0.607843
 
Yersinia pseudotuberculosis IP 32953, IP 32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pYV0058 lcrG; putative Yop regulatorpYV CDS40174 288 - 0.465278
 
Yersinia pseudotuberculosis IP 32953, IP32953
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA YPTB1885 possible ThiF familychromosome CDS2226643 1734 + 0.355248
NA YPTB1320 putative D-isomer specific 2-hydroxyacid dehydrogenase family...chromosome CDS1572120 966 - 0.599379
NA YPTB1371 putative iron ABC type transport, ATP-binding proteinchromosome CDS1633668 786 + 0.521628
NA YPTB0458 hypothetical proteinchromosome CDS544808 264 - 0.409091
NA YPTB2963 putative Nucleobase:Cation symporter, NCS1 familychromosome CDS3496321 1512 + 0.486772
NA YPTB0344 coproporphyrinogen III oxidasechromosome CDS408910 1314 - 0.509893
NA YPTB3020 hypothetical proteinchromosome CDS3559862 828 - 0.4843
NA YPTB3300 putative integral membrane efflux protein.chromosome CDS3918722 1557 - 0.486191
NA YPTB1343 siderophore/cobalamin ABC transporter, ATP-binding subunitchromosome CDS1601055 789 + 0.505703
NA YPTB0559 hypothetical proteinchromosome CDS661159 276 + 0.25
NA YPTB3188 putative Methenyl-THF synthetase-family protein (MTHFS).chromosome CDS3750229 597 + 0.519263
NA YPTB1970 hypothetical proteinchromosome CDS2320777 1998 - 0.466466
NA YPTB0351 hypothetical proteinchromosome CDS416548 1062 - 0.490584
NA YPTB2568 putative D-isomer specific 2-hydroxyacid dehydrogenase family...chromosome CDS3037877 951 - 0.48265
NA YPTB1545 putative ABC iron-siderophore transporter, ATP-binding subunitchromosome CDS1860083 849 - 0.485277
NA YPTB3910 2-hydroxyacid dehydrogenasechromosome CDS4667900 981 - 0.512742
NA YPTB1974 putative coenzyme synthetasechromosome CDS2326244 1287 + 0.525253
NA YPTB0125 putative vitamin B12 receptor protein, tonB dependentchromosome CDS147667 1875 + 0.455467
NA YPTB0078 hypothetical proteinchromosome CDS90750 714 - 0.540616
NA YPTB3218 coproporphyrinogen III oxidasechromosome CDS3782017 1131 + 0.490716
NA YPTB0264 hypothetical proteinchromosome CDS309858 1497 + 0.486306
apbE YPTB0893 thiamine biosynthesis lipoproteinchromosome CDS1077603 1023 + 0.479961
bioA YPTB1181 adenosylmethionine--8-amino-7-oxononanoate transaminasechromosome CDS1408162 1281 - 0.533177
bioB YPTB1182 biotin synthasechromosome CDS1409541 1038 + 0.510597
bioD YPTB2191 putative dethiobiotin synthetasechromosome CDS2580936 669 + 0.433483
bioD YPTB1185 dithiobiotin synthetasechromosome CDS1412509 723 + 0.542185
bioF YPTB1183 8-amino-7-oxononanoate synthasechromosome CDS1410578 1152 + 0.580729
birA YPTB0273 biotin--protein ligasechromosome CDS327123 960 + 0.405208
btuC YPTB2333 vtamin B12-transporter permeasechromosome CDS2755756 1008 - 0.485119
btuD YPTB2331 vitamin B12-transporter ATPasechromosome CDS2754349 762 - 0.469816
btuR YPTB2136 cob(I)yrinic acid a,c-diamide adenosyltransferasechromosome CDS2511865 591 - 0.49577
coaA YPTB0050 phosphopantetheine adenylyltransferasechromosome CDS61528 480 - 0.4625
coaA YPTB0274 pantothenate kinasechromosome CDS328117 951 - 0.399579
coaE YPTB0702 dephospho-CoA kinasechromosome CDS840104 621 - 0.470209
cspD YPTB1511 molybdopterin biosynthesis proteinchromosome CDS1814101 1275 - 0.502745
cysD YPTB0765 sulfate adenylyltransferase subunit 2chromosome CDS921656 909 + 0.493949
cysG YPTB0764 siroheme synthase, catalyses four separate reactions required for the transformation of uroporphyrinogen III into sirohemechromosome CDS920227 1419 + 0.55814
cysG YPTB3743 uroporphyrin-III C-methyltransferase / precorrin-2 oxidase / ...chromosome CDS4442876 1422 + 0.533755
cysH YPTB0761 phosphoadenosine phosphosulfate reductasechromosome CDS917855 735 + 0.503401
ddhD YPTB0998 CDP-6-deoxy-delta-3,4-glucoseen reductasechromosome CDS1198863 990 + 0.376768
dfp YPTB0045 phosphopantothenoylcysteine synthase/decarboxylasechromosome CDS57873 1218 - 0.481117
dxs YPTB0939 1-deoxy-D-xylulose-5-phosphate synthasechromosome CDS1132414 1860 - 0.48871
fadI YPTB0265 NAD(P)H-flavin reductasechromosome CDS311409 702 + 0.485755
fhuC YPTB0739 ABC type hydroxymate-dependent iron transport ATP binding proteinchromosome CDS888067 795 + 0.544654
folA YPTB0628 dihydrofolate reductase type I; trimethoprim resistancechromosome CDS746293 483 + 0.490683
folB YPTB3413 putative dihydroneopterin aldolasechromosome CDS4054968 360 - 0.5
folC YPTB2615 dihydrofolate synthase / folylpolyglutamate synthasechromosome CDS3090306 1305 - 0.530268
folD YPTB1037 putative FolD bifunctional proteinchromosome CDS1244117 867 - 0.514418
folE YPTB1520 GTP cyclohydrolase Ichromosome CDS1826650 705 + 0.451064
folK YPTB0731 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokina se, PPPKchromosome CDS877124 480 - 0.53125
folP YPTB0475 dihydropteroate synthasechromosome CDS560052 834 + 0.478417
gshA YPTB0829 glutamate--cysteine ligasechromosome CDS996079 1560 + 0.48141
gshB YPTB3207 glutathione synthetasechromosome CDS3773054 960 + 0.491667
hemA YPTB2004 glutamyl-tRNA reductasechromosome CDS2359761 1317 + 0.502658
hemB YPTB0262 delta-aminolevulinic acid dehydratasechromosome CDS307990 1023 + 0.476051
hemC YPTB0184 porphobilinogen deaminasechromosome CDS221351 942 - 0.548832
hemD YPTB0183 uroporphyrinogen-III synthetasechromosome CDS220605 750 - 0.510667
hemE YPTB0294 uroporphyrinogen decarboxylasechromosome CDS353238 1068 + 0.511236
hemF YPTB2754 coproporphyrinogen III oxidasechromosome CDS3253174 930 + 0.533333
hemG YPTB0271 protoporphyrinogen oxidasechromosome CDS319416 534 + 0.428839
hemH YPTB0997 ferrochelatasechromosome CDS1197303 963 + 0.458982
hemL YPTB0742 glutamate-1-semialdehyde aminotransferasechromosome CDS892281 1281 - 0.509758
hemN YPTB0021 coproporphyrinogen III oxidasechromosome CDS28357 1374 + 0.477438
hemX YPTB0182 putative uroporphyrin-III C-methyltransferasechromosome CDS219450 1125 - 0.503111
hemY YPTB0181 putative protoheme IX biogenesis proteinchromosome CDS218227 1221 - 0.523342
ilvB YPTB2216 acetolactate synthase large subunitchromosome CDS2614891 1668 + 0.502398
ilvC YPTB0145 ketol-acid reductoisomerasechromosome CDS176746 1479 + 0.503719
ilvE YPTB0136 branched-chain amino acid aminotransferasechromosome CDS167545 927 + 0.515642
ilvG YPTB0134 acetolactate synthase II large subunitchromosome CDS165622 1647 + 0.531876
ilvI YPTB0675 acetolactate synthase III large subunitchromosome CDS810018 1728 + 0.497685
ispA YPTB0940 geranyltranstransferase (farnesyldiphosphate synthase)chromosome CDS1134429 921 - 0.504886
ispB YPTB0463 octaprenyl-diphosphate synthasechromosome CDS548669 972 - 0.490741
kbl YPTB0056 2-amino-3-ketobutyrate coenzyme A ligasechromosome CDS67722 1212 + 0.500825
ldhA YPTB2248 D-lactate dehydrogenasechromosome CDS2655709 993 + 0.461229
lipA YPTB1091 lipoyl synthasechromosome CDS1308003 966 - 0.503106
lipB YPTB1092 lipoyltransferasechromosome CDS1309161 702 - 0.488604
lplA YPTB2322 lipoate-protein ligase Achromosome CDS2744703 1017 - 0.454277
menA YPTB0096 1,4-dihydroxy-2-naphthoate octaprenyltransferase,chromosome CDS107999 918 - 0.489107
menB YPTB2558 naphthoate synthasechromosome CDS3025578 858 - 0.522144
menC YPTB2557 O-succinylbenzoate synthasechromosome CDS3024607 972 - 0.572016
menD YPTB2560 2-oxoglutarate decarboxylasechromosome CDS3027264 1704 - 0.565141
menF YPTB2561 menaquinone-specific isochorismate synthasechromosome CDS3029195 1374 - 0.510917
menG YPTB0095 ribonuclease activity regulator protein RraAchromosome CDS107372 486 - 0.475309
metK YPTB3203 S-adenosylmethionine synthetasechromosome CDS3769297 1155 + 0.498701
moaA YPTB1190 molybdenum cofactor biosynthesis protein Achromosome CDS1419417 981 + 0.492355
moaC YPTB1191 molybdenum cofactor biosynthesis protein Cchromosome CDS1420620 480 + 0.533333
moaD YPTB1192 molybdopterin [mpt] converting factor, subunit 1chromosome CDS1421096 246 + 0.528455
moaE YPTB1193 molybdopterin [mpt] converting factor, subunit 2chromosome CDS1421341 456 + 0.539474
mobB YPTB0013 molybdopterin-guanine dinucleotide biosynthesis protein Bchromosome CDS19223 531 - 0.40678
moeB YPTB1510 molybdopterin biosynthesis protein MoeBchromosome CDS1813329 771 - 0.494163
mogA YPTB0607 molybdenum cofactor biosynthesis proteinchromosome CDS718745 588 + 0.438776
nadA YPTB1162 quinolinate synthetasechromosome CDS1388174 1062 + 0.508475
nadB YPTB2898 L-aspartate oxidasechromosome CDS3428311 1638 + 0.484737
nadC YPTB0708 nicotinate-nucleotide pyrophosphorylasechromosome CDS847280 909 - 0.488449
nadD YPTB1100 nicotinic acid mononucleotide adenyltransferasechromosome CDS1317521 663 - 0.491704
nadR YPTB0588 nicotinamide-nucleotide adenylyltransferasechromosome CDS692626 1272 + 0.48978
pabA YPTB3732 para-aminobenzoate synthase component IIchromosome CDS4427122 576 - 0.520833
pabB YPTB1649 para-aminobenzoate synthase component Ichromosome CDS2001250 1377 - 0.511256
pabC YPTB2468 4-amino-4-deoxychorismate lyasechromosome CDS2913300 807 - 0.491945
panB YPTB0730 3-methyl-2-oxobutanoate hydroxymethyltransferasechromosome CDS876058 801 - 0.521848
panC YPTB0729 pantoate--beta-alanine ligasechromosome CDS875116 855 - 0.526316
panD YPTB0728 aspartate 1-decarboxylase precursorchromosome CDS874325 381 - 0.485564
panE YPTB0945 2-dehydropantoate 2-reductasechromosome CDS1138030 912 - 0.464912
panF YPTB3574 sodium/panthothenate symporterchromosome CDS4254310 1455 + 0.527148
pdxA YPTB0634 4-hydroxythreonine-4-phosphate dehydrogenasechromosome CDS750256 996 - 0.502008
pdxB YPTB2620 erythronate-4-phosphate dehydrogenasechromosome CDS3095902 1188 - 0.535354
pdxH YPTB2284 pyridoxamine 5'-phosphate oxidasechromosome CDS2695621 654 - 0.490826
pdxJ YPTB2887 pyridoxal phosphate biosynthetic proteinchromosome CDS3417712 732 - 0.491803
pdxY YPTB2282 pyridoxine kinasechromosome CDS2693150 861 - 0.502904
pncB YPTB1437 nicotinate phosphoribosyltransferasechromosome CDS1725411 1206 - 0.472637
pnuC YPTB1163 intergral membrane NMN transport protein PnuCchromosome CDS1389357 726 + 0.461433
poxB YPTB1384 pyruvate dehydrogenasechromosome CDS1646186 1722 - 0.522067
ribA YPTB2144 GTP cyclohydrolase II proteinchromosome CDS2523619 591 - 0.468697
ribB YPTB3404 3,4-dihydroxy-2-butanone 4-phosphate synthasechromosome CDS4042309 654 - 0.521407
ribD YPTB0934 bifunctional pyrimidine deaminase/reductase in pathway of riboflavin synthesischromosome CDS1128413 1110 + 0.528829
ribE YPTB2304 riboflavin synthase subunit alphachromosome CDS2718594 657 - 0.452055
ribF YPTB0616 hypothetical proteinchromosome CDS731075 939 + 0.500533
ribH YPTB0935 riboflavin synthase subunit betachromosome CDS1129658 471 + 0.475584
serA YPTB3189 D-3-phosphoglycerate dehydrogenase (PGDH)chromosome CDS3751090 1242 - 0.486312
serC YPTB1414 phosphoserine aminotransferasechromosome CDS1692113 1086 + 0.474217
tbpA YPTB0663 ABC transporter, periplasmic thiamine binding protein tbpAchromosome CDS792494 993 - 0.498489
thiC YPTB0290 thiamine biosynthesis protein ThiCchromosome CDS348433 2046 - 0.51955
thiD YPTB2824 phosphomethylpyrimidine kinasechromosome CDS3339691 801 - 0.558052
thiE YPTB0289 thiamine-phosphate pyrophosphorylasechromosome CDS347772 648 - 0.532407
thiF YPTB0288 thiamine biosynthesis protein ThiFchromosome CDS346985 798 - 0.5401
thiG YPTB0286 thiazole synthasechromosome CDS345956 816 - 0.53799
thiH YPTB0285 thiamine biosynthesis protein ThiHchromosome CDS344833 1131 - 0.501326
thiL YPTB0937 thiamine monophosphate kinasechromosome CDS1130806 990 + 0.489899
thiQ YPTB0661 ABC thiamine transporter, ATP binding subunit thiQchromosome CDS790214 684 - 0.542398
thiS YPTB0287 sulfur carrier protein ThiSchromosome CDS346773 216 - 0.5
trpE YPTB2130 anthranilate synthase component Ichromosome CDS2506825 1566 - 0.505109
trpG YPTB2129 anthranilate synthase component IIchromosome CDS2506247 579 - 0.518135
ubiA YPTB0367 4-hydroxybenzoate octaprenyltransferasechromosome CDS438907 867 + 0.483276
ubiC YPTB0366 putative chorismate--pyruvate lyasechromosome CDS438217 525 + 0.506667
ubiE YPTB0255 ubiquinone/menaquinone biosynthesis methyltransferasechromosome CDS302196 756 + 0.44709
ubiF YPTB1114 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylasechromosome CDS1333368 1182 + 0.535533
ubiG YPTB1255 3-demethylubiquinone-9 3-methyltransferasechromosome CDS1496686 729 - 0.499314
ubiH YPTB3184 2-octaprenyl-6-methoxyphenyl hydroxylasechromosome CDS3745990 1179 - 0.552163
ubiX YPTB2611 3-octaprenyl-4-hydroxybenzoate carboxy-lyasechromosome CDS3086294 573 - 0.467714
visC YPTB3183 hypothetical proteinchromosome CDS3744597 1221 - 0.550369
wbyH YPTB1003 hypothetical proteinchromosome CDS1203967 1284 + 0.351246
ybtS YPTB1601 anthranilate synthase component Ichromosome CDS1946845 1305 + 0.55249
ygcM YPTB0758 putative 6-pyruvoyl tetrahydrobiopterin synthase family proteinchromosome CDS913520 360 - 0.475