TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-13 03:35:48
Summary for Escherichia coli W3110, K-12.
Add a genome
Remove a genome
 
chr: chromosome(s), pl: plasmid(s), seg: segment(s)
Free access

 

 Escherichia coli W3110, K-12
Genomic elements1 chromosomes(s)
Show details
 
Genome featuresCDS:
4226 genes, length ø 953 bp, gc-content ø 0.51
 
'+'-strand:
2097 genes, length ø 946 bp, gc-content ø 0.509
 
'-'-strand:
2129 genes, length ø 960 bp, gc-content ø 0.512
 
misc_RNA:
49 genes, length ø 144 bp, gc-content ø 0.483
 
'+'-strand:
29 genes, length ø 141 bp, gc-content ø 0.478
 
'-'-strand:
20 genes, length ø 148 bp, gc-content ø 0.491
 
misc_feature:
4 genes, length ø 2705 bp, gc-content ø 0.508
 
'+'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
'-'-strand:
4 genes, length ø 2705 bp, gc-content ø 0.508
 
pseudo:
176 genes, length ø 1176 bp, gc-content ø 0.488
 
'+'-strand:
100 genes, length ø 1257 bp, gc-content ø 0.493
 
'-'-strand:
76 genes, length ø 1068 bp, gc-content ø 0.482
 
rRNA:
22 genes, length ø 1458 bp, gc-content ø 0.573
 
'+'-strand:
6 genes, length ø 1522 bp, gc-content ø 0.571
 
'-'-strand:
16 genes, length ø 1434 bp, gc-content ø 0.574
 
rep_origin:
1 genes, length ø 232 bp, gc-content ø 0.409
 
'+'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
'-'-strand:
1 genes, length ø 232 bp, gc-content ø 0.409
 
tRNA:
86 genes, length ø 78 bp, gc-content ø 0.589
 
'+'-strand:
36 genes, length ø 76 bp, gc-content ø 0.58
 
'-'-strand:
50 genes, length ø 79 bp, gc-content ø 0.595
 
COG categories 
Amino acid transport and metabolism [E]447
Carbohydrate transport and metabolism [G]401
Cell cycle control, mitosis and meiosis [D]42
Cell motility [N]123
Cell wall/membrane biogenesis [M]232
Chromatin structure and dynamics [B]0
Coenzyme transport and metabolism [H]154
Cytoskeleton [Z]0
Defense mechanisms [V]45
Energy production and conversion [C]291
Extracellular structures [W]2
Function unknown [S]306
General function prediction only [R]523
Inorganic ion transport and metabolism [P]290
Intracellular trafficking and secretion [U]110
Lipid transport and metabolism [I]103
NOT ANALYZED308
Nuclear structure [Y]0
Nucleotide transport and metabolism [F]92
Posttranslational modification, protein turnover, chaperones [O]143
RNA processing and modification [A]1
Replication, recombination and repair [L]254
Secondary metabolites biosynthesis, transport and catabolism [Q]82
Signal transduction mechanisms [T]189
Transcription [K]318
Translation, ribosomal structure and biogenesis [J]187
Unclassified [-]575