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2024-05-13 11:53:59
Summary for Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS.
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chr: chromosome(s), pl: plasmid(s), seg: segment(s)
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 Buchnera aphidicola str. APS (Acyrthosiphon pisum), APS
Genomic elements1 chromosomes(s), 2 circular plasmid(s)
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Genome featuresCDS:
574 genes, length ø 986 bp, gc-content ø 0.273
 
'+'-strand:
312 genes, length ø 988 bp, gc-content ø 0.268
 
'-'-strand:
262 genes, length ø 985 bp, gc-content ø 0.279
 
misc_RNA:
1 genes, length ø 324 bp, gc-content ø 0.416
 
'+'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
'-'-strand:
1 genes, length ø 324 bp, gc-content ø 0.416
 
misc_feature:
8 genes, length ø 922 bp, gc-content ø 0.268
 
'+'-strand:
4 genes, length ø 1130 bp, gc-content ø 0.254
 
'-'-strand:
4 genes, length ø 714 bp, gc-content ø 0.283
 
pseudo:
2 genes, length ø 74 bp, gc-content ø 0.5
 
'+'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
'-'-strand:
2 genes, length ø 74 bp, gc-content ø 0.5
 
rRNA:
3 genes, length ø 1496 bp, gc-content ø 0.486
 
'+'-strand:
1 genes, length ø 1460 bp, gc-content ø 0.501
 
'-'-strand:
2 genes, length ø 1514 bp, gc-content ø 0.478
 
tRNA:
31 genes, length ø 76 bp, gc-content ø 0.534
 
'+'-strand:
10 genes, length ø 78 bp, gc-content ø 0.553
 
'-'-strand:
21 genes, length ø 76 bp, gc-content ø 0.524
 
variation:
8 genes, length ø 1 bp, gc-content ø 0.5
 
'+'-strand:
8 genes, length ø 1 bp, gc-content ø 0.5
 
'-'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
COG categories 
Amino acid transport and metabolism [E]68
Carbohydrate transport and metabolism [G]34
Cell cycle control, mitosis and meiosis [D]12
Cell motility [N]27
Cell wall/membrane biogenesis [M]29
Chromatin structure and dynamics [B]0
Coenzyme transport and metabolism [H]39
Cytoskeleton [Z]0
Defense mechanisms [V]4
Energy production and conversion [C]47
Extracellular structures [W]0
Function unknown [S]16
General function prediction only [R]36
Inorganic ion transport and metabolism [P]20
Intracellular trafficking and secretion [U]24
Lipid transport and metabolism [I]16
NOT ANALYZED53
Nuclear structure [Y]0
Nucleotide transport and metabolism [F]29
Posttranslational modification, protein turnover, chaperones [O]39
RNA processing and modification [A]1
Replication, recombination and repair [L]42
Secondary metabolites biosynthesis, transport and catabolism [Q]4
Signal transduction mechanisms [T]5
Transcription [K]19
Translation, ribosomal structure and biogenesis [J]119
Unclassified [-]5