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2024-05-12 16:29:54
Summary for Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2.
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chr: chromosome(s), pl: plasmid(s), seg: segment(s)
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 Salmonella enterica subsp. enterica serovar Typhi Ty2, Ty2
Genomic elements1 chromosomes(s)
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Genome featuresCDS:
4318 genes, length ø 914 bp, gc-content ø 0.522
 
'+'-strand:
2243 genes, length ø 901 bp, gc-content ø 0.523
 
'-'-strand:
2075 genes, length ø 929 bp, gc-content ø 0.521
 
misc_RNA:
9 genes, length ø 250 bp, gc-content ø 0.493
 
'+'-strand:
4 genes, length ø 228 bp, gc-content ø 0.493
 
'-'-strand:
5 genes, length ø 267 bp, gc-content ø 0.493
 
misc_feature:
4 genes, length ø 435 bp, gc-content ø 0.485
 
'+'-strand:
2 genes, length ø 498 bp, gc-content ø 0.48
 
'-'-strand:
2 genes, length ø 373 bp, gc-content ø 0.489
 
pseudo:
218 genes, length ø 1377 bp, gc-content ø 0.512
 
'+'-strand:
118 genes, length ø 1342 bp, gc-content ø 0.513
 
'-'-strand:
100 genes, length ø 1419 bp, gc-content ø 0.51
 
rRNA:
22 genes, length ø 1488 bp, gc-content ø 0.574
 
'+'-strand:
6 genes, length ø 1553 bp, gc-content ø 0.573
 
'-'-strand:
16 genes, length ø 1463 bp, gc-content ø 0.575
 
tRNA:
78 genes, length ø 78 bp, gc-content ø 0.588
 
'+'-strand:
27 genes, length ø 78 bp, gc-content ø 0.593
 
'-'-strand:
51 genes, length ø 78 bp, gc-content ø 0.585
 
COG categories 
Amino acid transport and metabolism [E]411
Carbohydrate transport and metabolism [G]367
Cell cycle control, mitosis and meiosis [D]46
Cell motility [N]110
Cell wall/membrane biogenesis [M]239
Chromatin structure and dynamics [B]1
Coenzyme transport and metabolism [H]165
Cytoskeleton [Z]0
Defense mechanisms [V]48
Energy production and conversion [C]278
Extracellular structures [W]2
Function unknown [S]327
General function prediction only [R]540
Inorganic ion transport and metabolism [P]253
Intracellular trafficking and secretion [U]122
Lipid transport and metabolism [I]91
NOT ANALYZED325
Nuclear structure [Y]0
Nucleotide transport and metabolism [F]80
Posttranslational modification, protein turnover, chaperones [O]170
RNA processing and modification [A]1
Replication, recombination and repair [L]201
Secondary metabolites biosynthesis, transport and catabolism [Q]78
Signal transduction mechanisms [T]180
Transcription [K]325
Translation, ribosomal structure and biogenesis [J]189
Unclassified [-]746