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2024-05-12 17:47:07
Summary for Shigella dysenteriae Sd197, Sd197.
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chr: chromosome(s), pl: plasmid(s), seg: segment(s)
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 Shigella dysenteriae Sd197, Sd197
Genomic elements1 chromosomes(s), 1 circular plasmid(s)
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Genome featuresCDS:
4497 genes, length ø 781 bp, gc-content ø 0.512
 
'+'-strand:
2135 genes, length ø 774 bp, gc-content ø 0.511
 
'-'-strand:
2362 genes, length ø 787 bp, gc-content ø 0.513
 
pseudo:
289 genes, length ø 1369 bp, gc-content ø 0.514
 
'+'-strand:
136 genes, length ø 1343 bp, gc-content ø 0.51
 
'-'-strand:
153 genes, length ø 1391 bp, gc-content ø 0.518
 
rRNA:
22 genes, length ø 1457 bp, gc-content ø 0.576
 
'+'-strand:
3 genes, length ø 1521 bp, gc-content ø 0.574
 
'-'-strand:
19 genes, length ø 1447 bp, gc-content ø 0.576
 
repeat_region:
701 genes, length ø 812 bp, gc-content ø 0.512
 
'+'-strand:
331 genes, length ø 808 bp, gc-content ø 0.512
 
'-'-strand:
370 genes, length ø 815 bp, gc-content ø 0.512
 
tRNA:
84 genes, length ø 78 bp, gc-content ø 0.587
 
'+'-strand:
32 genes, length ø 78 bp, gc-content ø 0.577
 
'-'-strand:
52 genes, length ø 78 bp, gc-content ø 0.592
 
COG categories 
Amino acid transport and metabolism [E]363
Carbohydrate transport and metabolism [G]257
Cell cycle control, mitosis and meiosis [D]38
Cell motility [N]53
Cell wall/membrane biogenesis [M]197
Chromatin structure and dynamics [B]0
Coenzyme transport and metabolism [H]147
Cytoskeleton [Z]0
Defense mechanisms [V]40
Energy production and conversion [C]227
Extracellular structures [W]7
Function unknown [S]288
General function prediction only [R]425
Inorganic ion transport and metabolism [P]259
Intracellular trafficking and secretion [U]102
Lipid transport and metabolism [I]82
NOT ANALYZED1096
Nuclear structure [Y]0
Nucleotide transport and metabolism [F]74
Posttranslational modification, protein turnover, chaperones [O]130
RNA processing and modification [A]3
Replication, recombination and repair [L]1108
Secondary metabolites biosynthesis, transport and catabolism [Q]60
Signal transduction mechanisms [T]129
Transcription [K]252
Translation, ribosomal structure and biogenesis [J]180
Unclassified [-]594