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2024-05-13 05:04:42
Summary for Escherichia coli UTI89, UTI89.
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chr: chromosome(s), pl: plasmid(s), seg: segment(s)
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 Escherichia coli UTI89, UTI89
Genomic elements1 chromosomes(s), 1 circular plasmid(s)
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Genome featuresCDS:
5189 genes, length ø 906 bp, gc-content ø 0.503
 
'+'-strand:
2526 genes, length ø 893 bp, gc-content ø 0.504
 
'-'-strand:
2663 genes, length ø 919 bp, gc-content ø 0.503
 
misc_feature:
9 genes, length ø 25547 bp, gc-content ø 0.506
 
'+'-strand:
9 genes, length ø 25547 bp, gc-content ø 0.506
 
'-'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
rRNA:
22 genes, length ø 1458 bp, gc-content ø 0.573
 
'+'-strand:
12 genes, length ø 1522 bp, gc-content ø 0.571
 
'-'-strand:
10 genes, length ø 1381 bp, gc-content ø 0.575
 
tRNA:
88 genes, length ø 75 bp, gc-content ø 0.584
 
'+'-strand:
48 genes, length ø 74 bp, gc-content ø 0.582
 
'-'-strand:
40 genes, length ø 76 bp, gc-content ø 0.587
 
COG categories 
Amino acid transport and metabolism [E]422
Carbohydrate transport and metabolism [G]384
Cell cycle control, mitosis and meiosis [D]40
Cell motility [N]136
Cell wall/membrane biogenesis [M]222
Chromatin structure and dynamics [B]0
Coenzyme transport and metabolism [H]165
Cytoskeleton [Z]0
Defense mechanisms [V]22
Energy production and conversion [C]284
Extracellular structures [W]0
Function unknown [S]309
General function prediction only [R]487
Inorganic ion transport and metabolism [P]283
Intracellular trafficking and secretion [U]44
Lipid transport and metabolism [I]91
NOT ANALYZED119
Nuclear structure [Y]0
Nucleotide transport and metabolism [F]89
Posttranslational modification, protein turnover, chaperones [O]138
RNA processing and modification [A]1
Replication, recombination and repair [L]203
Secondary metabolites biosynthesis, transport and catabolism [Q]106
Signal transduction mechanisms [T]169
Transcription [K]302
Translation, ribosomal structure and biogenesis [J]182
Unclassified [-]1652