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2024-05-13 13:29:16
Summary for Yersinia pestis Antiqua, Antiqua.
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chr: chromosome(s), pl: plasmid(s), seg: segment(s)
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 Yersinia pestis Antiqua, Antiqua
Genomic elements1 chromosomes(s), 3 circular plasmid(s)
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Genome featuresCDS:
4364 genes, length ø 938 bp, gc-content ø 0.48
 
'+'-strand:
2152 genes, length ø 948 bp, gc-content ø 0.48
 
'-'-strand:
2212 genes, length ø 928 bp, gc-content ø 0.48
 
misc_RNA:
14 genes, length ø 211 bp, gc-content ø 0.483
 
'+'-strand:
6 genes, length ø 225 bp, gc-content ø 0.477
 
'-'-strand:
8 genes, length ø 200 bp, gc-content ø 0.488
 
misc_feature:
1 genes, length ø 338 bp, gc-content ø 0.467
 
'+'-strand:
1 genes, length ø 338 bp, gc-content ø 0.467
 
'-'-strand:
0 genes, length ø 0 bp, gc-content ø 0
 
pseudo:
5 genes, length ø 329 bp, gc-content ø 0.458
 
'+'-strand:
3 genes, length ø 114 bp, gc-content ø 0.487
 
'-'-strand:
2 genes, length ø 653 bp, gc-content ø 0.414
 
rRNA:
21 genes, length ø 1552 bp, gc-content ø 0.528
 
'+'-strand:
9 genes, length ø 1551 bp, gc-content ø 0.529
 
'-'-strand:
12 genes, length ø 1552 bp, gc-content ø 0.528
 
sig_peptide:
715 genes, length ø 85 bp, gc-content ø 0.458
 
'+'-strand:
339 genes, length ø 85 bp, gc-content ø 0.459
 
'-'-strand:
376 genes, length ø 85 bp, gc-content ø 0.457
 
tRNA:
67 genes, length ø 78 bp, gc-content ø 0.583
 
'+'-strand:
34 genes, length ø 78 bp, gc-content ø 0.58
 
'-'-strand:
33 genes, length ø 78 bp, gc-content ø 0.587
 
COG categories 
Amino acid transport and metabolism [E]396
Carbohydrate transport and metabolism [G]354
Cell cycle control, mitosis and meiosis [D]44
Cell motility [N]156
Cell wall/membrane biogenesis [M]209
Chromatin structure and dynamics [B]0
Coenzyme transport and metabolism [H]143
Cytoskeleton [Z]0
Defense mechanisms [V]48
Energy production and conversion [C]195
Extracellular structures [W]2
Function unknown [S]346
General function prediction only [R]425
Inorganic ion transport and metabolism [P]268
Intracellular trafficking and secretion [U]137
Lipid transport and metabolism [I]91
NOT ANALYZED887
Nuclear structure [Y]0
Nucleotide transport and metabolism [F]80
Posttranslational modification, protein turnover, chaperones [O]137
RNA processing and modification [A]0
Replication, recombination and repair [L]456
Secondary metabolites biosynthesis, transport and catabolism [Q]88
Signal transduction mechanisms [T]137
Transcription [K]263
Translation, ribosomal structure and biogenesis [J]188
Unclassified [-]704